scholarly journals CONFORMATIONAL EQUILIBRIUM AND SPECTROSCOPIC PROPERTIES OF CALIX[4]ARENE: THEORETICAL STUDY USING AB INITIO METHOD

2010 ◽  
Vol 8 (3) ◽  
pp. 397-403 ◽  
Author(s):  
Hanggara Sudrajat ◽  
Ria Armunanto
Keyword(s):  
Ab Initio ◽  
Conformational Equilibrium ◽  
Spectroscopic Properties ◽  
Molecular Structures ◽  
Basis Set ◽  
Basis Sets ◽  
Molecular Orbital Calculations ◽  
Stable Conformer ◽  
Hartree Fock ◽  
Partial Cone

Molecular structures were optimized for the calix[4]arene by ab initio method at the Hartree-Fock level of theory using LANL2DZ and 6-311G basis sets. Conformational equilibrium of four calix[4]arene conformers are reported. The results are compared with experiment, force field, and semiempirical molecular orbital calculations. General trends in relative stabilities of calix[4]arene decrease in following order: cone > partial-cone > 1,2-alternate > 1,3-alternate. The most stable conformer is the cone conformer that is stabilized by an array of four hydrogen bonds and these results agree with the reported experimental observations. All structures were analyzed using theoretical IR, UV-Vis, and 1H NMR spectra attributed to the conformational equilibrium at the Hartree-Fock level of theory using LANL2DZ basis set.     Keywords: ab initio calculation, calix[4]arene, conformations, cone

Structures of simple anions from ab initio molecular orbital calculations

1976 ◽  
Vol 29 (8) ◽  
pp. 1635 ◽  
Author(s):  
L Radom
Keyword(s):  
Ab Initio ◽  
Molecular Orbital ◽  
Basis Set ◽  
Basis Sets ◽  
Molecular Orbital Calculations ◽  
Limited Information ◽  
Orbital Theory ◽  
Comparable Quality ◽  
Split Valence ◽  
Theoretical Results

Ab initio molecular orbital theory with the minimal STO-3G and split-valence 4-31G basis sets is used to obtain geometries of 18 anions:OH-, NH2-, HF2-, BH4-, BF4-, C22-, CN-, NCN2-, N3-, NO2-, NO3-, 0CCO2-, CO32-, HCOO-, CH3COO-, C2O42-, C4O42- and C(CN)3-. The theoretical results are compared with experimental results from the literature. The STO-3G basis set performs somewhat worse for anions than for neutral molecules. On the other hand, the 4-31G basis set gives good results and predicts bond lengths to within 0.02� for all the molecules considered. Limited information on bond angle predictions suggests that these are of comparable quality to those for neutral molecules. The tricyanomethanide ion is predicted to be planar.

The simplified ab initio method calculation of linear polarizability

1973 ◽  
Vol 26 (5) ◽  
pp. 921 ◽  
Author(s):  
RD Brown ◽  
GR Williams
Keyword(s):  
Ab Initio ◽  
Small Molecules ◽  
Basis Set ◽  
Basis Sets ◽  
Orbital Method ◽  
Polarizability Anisotropy ◽  
Minimal Basis ◽  
Hartree Fock ◽  
Numerical Performance ◽  
Experimental Values

The simplified ab-initio molecular-orbital method described previously is particularly suited to the calculation of polarizabilities by the non-perturbative coupled Hartree-Fock technique. Trial calculations on CO and HF, for which comparison with corresponding ab-initio calculations is possible, show that the method gives an adequate numerical performance. Minimal basis set calculations in general tend to give values that are considerably too low because of inadequate flexibility of the basis and this is the origin of the large discrepancy between theory and experiment, especially for small molecules. ��� Results are also reported for N2O and O3. For these larger systems the SAI results with minimal basis sets are noticeably nearer experimental values. The polarizability anisotropy for N2O is particularly well reproduced by the SAI method. �

AB INITIO CALCULATIONS OF INTERMOLECULAR INTERACTION POTENTIALS OF FULLERENE-FRAGMENTS SYSTEMS

2005 ◽  
Vol 04 (01) ◽  
pp. 49-58 ◽  
Author(s):  
YUKIUMI KITA ◽  
KEI WAKO ◽  
ISAMU OKADA ◽  
MASANORI TACHIKAWA
Keyword(s):  
Ab Initio ◽  
Intermolecular Interaction ◽  
Correlation Energy ◽  
Basis Set ◽  
Basis Sets ◽  
Cubic Phase ◽  
Molecular Orbital Calculations ◽  
Interaction Potentials ◽  
Basis Set Superposition Error ◽  
Intermolecular Distances

We have performed the ab initio molecular orbital calculations for combinations of the fullerene-fragments as the models of the nonbonding interaction of C 60 dimer at the preferred configurations in the simple cubic phase. The intermolecular interaction potentials have been calculated using several basis sets with MP2 level of the electron correlation energy and the basis set superposition error correction. The strong dispersion attractions that is dominant in the van der Waals interaction has been found for the combinations of the fullerene-fragments. The equilibrium intermolecular distances obtained are in good agreement with the corresponding experimental value. The repulsive region of the intermolecular interaction calculated by ab initio method is found to be express by an atom–atom interaction potential with an anisotropic exponential type repulsive term, which is less steep than the conventional Lennard–Jones type potential.

Conformational and Vibrational Analysis of 2,4-, 2,5- and 2,6-Difluorobenzaldehydes by ab initio Hartree-Fock and Density Functional Theory Calculations

2008 ◽  
Vol 63 (3-4) ◽  
pp. 175-182 ◽  
Author(s):  
Adnan Sağlam ◽  
Fatih Ucun
Keyword(s):  
Density Functional Theory ◽  
Ab Initio ◽  
Density Functional ◽  
Vibrational Analysis ◽  
Molecular Structures ◽  
Basis Set ◽  
Functional Theory ◽  
Vibrational Assignments ◽  
Hartree Fock ◽  
The Mean

The optimized molecular structures, vibrational frequencies and corresponding vibrational assignments of the two planar O-cis and O-trans rotomers of 2,4-, 2,5- and 2,6-difluorobenzaldehyde have been calculated using ab initio Hartree-Fock (HF) and density functional theory (B3LYP) methods with the 6-311++G(d,p) basis set level. The calculations were adapted to the CS symmetries of all the molecules. The O-trans rotomers with lower energy of all the compounds have been found as preferential rotomers in the ground state. The mean vibrational deviations between the vibrational frequency values of the two conformers of all the compounds have been shown to increase while the relative energies increase, and so it has been concluded that the higher the relative energy between the two conformers the bigger is the mean vibrational deviation.

Ab initio studies of isocyanatoborane and difluoroisocyanatoborane; bent or linear BNCO chains?

1991 ◽  
Vol 69 (6) ◽  
pp. 1000-1005 ◽  
Author(s):  
Susan Ellis ◽  
Edward G. Livingstone ◽  
Nicholas P. C. Westwood
Keyword(s):  
Carbon Atom ◽  
Ab Initio Calculations ◽  
Ab Initio ◽  
Potential Surface ◽  
Energy Difference ◽  
Basis Set ◽  
Basis Sets ◽  
Hartree Fock ◽  
Split Valence ◽  
Valence Basis Set

Ab initio calculating at the 3-21G, 6-31G*, 6-31G**, 6-311G*, and 6-311G** Hartree–Fock levels, have been performed on the unknown H2BNCO and F2BNCO molecules in order to establish the geometries of these isoelectronic propadienone analogues. For H2BNCO the double split valence basis sets lead to linear BNCO chains, whereas either a triple split valence basis set, or the inclusion of correlation to second order (MP2/6-31G*) gives trans-bent structures. These have angles at nitrogen of 153.6° (6-311G*) or 149.9° (MP2/6-31G*), with the potential surface for angle bending extremely flat, and 0.5 kJ mol−1 (6-311 G*) or 1.12 kJ mol−1 (MP2/6-31 G*) separating the C2v and Cs structures. For the bent structures there is a small trans-bend (4–6°) at the carbon atom. The F2BNCO molecule is also linear at the 3-21G level, but is, however, already trans-bent (145.6° at nitrogen, 175.9° at carbon) at the 6-31G* Hartree–Fock level; 1.47 kJ mol−1 separates the bent and linear structures. The triple split valence basis set 6-311G* leads to a further decrease in the angle at nitrogen (141.0°), and a similar NCO angle (175.9°), with the bent structure favoured by 3.85 kJ mol−1. MP2/6-31G* calculations give a minimum with an angle at nitrogen of 140.2°, and a bent-linear energy difference of 3.58 kJ mol−1. Key words: ab initio calculations, isocyanatoboranes, structures, quasilinearity, propadienone analogues.

Nitrosyl cyanide and related aspects of the ONCN potential surface

1978 ◽  
Vol 31 (11) ◽  
pp. 2349 ◽  
Author(s):  
BG Gowenlock ◽  
L Radom
Keyword(s):  
Experimental Data ◽  
Ab Initio ◽  
Molecular Orbital ◽  
Related Species ◽  
Potential Surface ◽  
Basis Sets ◽  
Molecular Orbital Calculations ◽  
Hartree Fock ◽  
Split Valence ◽  
Good Agreement

Ab initio molecular orbital calculations using the restricted Hartree-Fock approach have been carried out for nitrosyl cyanide and related species on the ONCN potential surface. Full geometry optimizations have been performed with the minimal STO-3G and split-valence 4-31G basis sets. Calculated (4-31G) geometries are in good agreement with available experimental data as are the energy changes in the reactions ONCN → NO + CN and NO + CN → N2 + CO. Possible mechanisms are discussed.

Ab initio MO Optimizations of Osmiumtetracarbonyldihydride and Metallacyclophanes with two Osmium Atoms and their Molecular Complexes with Different Guests

1998 ◽  
Vol 53 (10) ◽  
pp. 1223-1235
Author(s):  
Inge Warttmann ◽  
Günter Häfelinger
Keyword(s):  
Ab Initio ◽  
Density Functional ◽  
Cyano Group ◽  
Single Point ◽  
Molecular Complexes ◽  
Basis Set ◽  
Basis Sets ◽  
Basis Set Superposition Error ◽  
Hartree Fock ◽  
Surprising Effect

AbstractAb initio Hartree-Fock (HF) and density functional (DFT) optimizations on the test m olecule osmiumtetracarbonyldihydride (13) with various basis sets show that the lanl2mb pseudopotential basis set for osmium leads in the HF approximation to more reliable molecular geometries than the DFT calculations. This HF procedure was used for the optimizations of molecular geometries of three isomeric 4,4,4,4,17,17,17,17-octacarbonyl-4,17-diosma[7.7]ortho-, meta- and paracyclophanes 1 to 3, of which 3 was found to be predestined for formation of various host-guest complexes with possible guests benzene (4), fluorobenzene (5), 1,3,5- trifluorobenzene (6), 1,2,4,5-tetrafluorobenzene (7), hexafluorobenzene (8), fluoroanil (9), tetrafluoroethene (10), tetracyanoethene (11) and aniline (12). Results of optimized hostguest geometries are presented graphically for inclusions and associations of guest 4 to 12 with 3. Calculated lanl2mb interaction energies, after correction for basis set superposition error (BSSE), remain favourable only for inclusion of 5 and associations of 5, 10, 11 and 12. Additionally lanl2dz single point calculations for inclusion, which may not need BSSE correction because of the improved basis set, are favourable for 6 and 12. According to lanl2mb HOMO and LUMO energies, 3 may as well easily donate or accept electrons. This may be an interpretation to the surprising effect, that Mulliken total charges are positive on the electron accepting guest molecules 4 to 11. There are geometrical peculiarities in the optimized host-guest complexes for inclusion and association. Fluorine atoms of 5 to 10 and nitrogen atoms of a cyano group of 11 and the amino group of 12 like to come close to one or two carbonyl groups. Similar distances of 2.70 Å to 3.57 Å between the O atom of the carbonyl group and the F atom or N atom appear in all optimizations of inclusion and association of 5 to 12 except in the case of association of tetrafluoroethene (10).

Raman and infrared spectra, conformational stability, vibrational assignment, and ab initio calculations of cis-1,3-dichloropropene

1993 ◽  
Vol 71 (10) ◽  
pp. 1751-1763 ◽  
Author(s):  
J.R. Durig ◽  
T.G. Costner ◽  
T.S. Little
Keyword(s):  
Transition State ◽  
Ab Initio ◽  
Conformational Stability ◽  
Basis Set ◽  
Basis Sets ◽  
Field Calculation ◽  
Harmonic Force ◽  
Gauche Conformer ◽  
Hartree Fock ◽  
Equilibrium Geometries

The Raman (3200−10 cm−1) and infrared (3200−20 cm−1) spectra of gaseous and solid cis-1,3-dichloropropene, cis-ClHC=CHCH2Cl, have been recorded. Additionally, the Raman spectrum of the liquid with qualitative depolarization data has also been obtained. These spectral data have been interpreted on the basis that the molecule exists predominantly in the gauche (allylic chlorine atom oriented gauche to the double bond) conformation in all physical phases. Some bands in the infrared spectrum of the gas could be due to a second higher energy conformer but the lack of corresponding Raman bands casts doubt on such an assignment. Ab initio Hartree–Fock gradient calculations employing the RHF/6-31G* basis set are consistent with two minima that correspond to the two equivalent gauche forms for the potential surface for the internal rotation about the C—C bond. These minima occur at dihedral angles, [Formula: see text] ClCCC, of 122° and 238° (0° corresponds to the syn conformation) and the gauche to gauche barrier at the 180° transition state, which corresponds to the anti structure, is 342 cm−1. The barrier from the gauche minima to the syn (0°) structure, which is also a transition state, is 2425 cm−1. Complete equilibrium geometries for the gauche structure have been determined with the RHF/3-21G*, RHF/6-31G*, and MP2/6-31G* basis sets. A normal coordinate analysis utilizing a harmonic force field calculation with the RHF/3-21G* basis set has been carried out for the gauche conformer. The results are discussed and compared with the corresponding quantities obtained for some similar molecules.

Ab Initio Hartree-Fock and Density Functional Theory Study on Molecular Structures, Energies, and Vibrational Frequencies of 2-Amino-3-, 4-, and 5-Nitropyridine

2010 ◽  
Vol 65 (1-2) ◽  
pp. 107-112 ◽  
Author(s):  
Yusuf Sert ◽  
Fatih Ucun ◽  
Mustafa Böyükata
Keyword(s):  
Experimental Data ◽  
Density Functional Theory ◽  
Ab Initio ◽  
Density Functional ◽  
Vibrational Frequencies ◽  
Geometric Parameters ◽  
Molecular Structures ◽  
Basis Set ◽  
Functional Theory ◽  
Hartree Fock

AbstractThe molecular structures, vibrational frequencies, and corresponding vibrational assignments of 2-amino-3-, 4-, and 5-nitropyridine have been calculated by using ab initio Hartree-Fock (HF) and density functional theory (B3LYP) methods with 6-311++G(d,p) basis set level. The calculated vibrational frequencies and optimized geometric parameters (bond lengths and bond angles) were found to be in well agreement with the experimental data. The comparison of the observed and the calculated results showed that the scaled B3LYP method is superior to the scaled HF method for both the vibrational frequencies and the geometric parameters. For well fitting the calculated and the experimental frequencies we used scale factors obtained from the ratio of the frequency values of the strongest peaks in the calculated and the experimental spectra. These obtained scales seem to cause the better agreement of the gained vibrations to the experimental data.

A Systematic DFT Study of Two Elementary Steps Involving Hydrogen Peroxide and the Hydroxyl Radical in the Fenton Reaction

2018 ◽  
Author(s):  
Danilo Carmona ◽  
David Contreras ◽  
Oscar A. Douglas-Gallardo ◽  
Stefan Vogt-Geisse ◽  
Pablo Jaque ◽  
...  
Keyword(s):  
Hydrogen Peroxide ◽  
Hydroxyl Radical ◽  
Ab Initio ◽  
Fenton Reaction ◽  
Basis Set ◽  
Basis Sets ◽  
Dft Methods ◽  
Elementary Steps ◽  
Oxygen Oxygen ◽  
Complete Basis Set

The Fenton reaction plays a central role in many chemical and biological processes and has various applications as e.g. water remediation. The reaction consists of the iron-catalyzed homolytic cleavage of the oxygen-oxygen bond in the hydrogen peroxide molecule and the reduction of the hydroxyl radical. Here, we study these two elementary steps with high-level ab-initio calculations at the complete basis set limit and address the performance of different DFT methods following a specific classification based on the Jacob´s ladder in combination with various Pople's basis sets. Ab-initio calculations at the complete basis set limit are in agreement to experimental reference data and identified a significant contribution of the electron correlation energy to the bond dissociation energy (BDE) of the oxygen-oxygen bond in hydrogen peroxide and the electron affinity (EA) of the hydroxyl radical. The studied DFT methods were able to reproduce the ab-initio reference values, although no functional was particularly better for both reactions. The inclusion of HF exchange in the DFT functionals lead in most cases to larger deviations, which might be related to the poor description of the two reactions by the HF method. Considering the computational cost, DFT methods provide better BDE and EA values than HF and post--HF methods with an almost MP2 or CCSD level of accuracy. However, no systematic general prediction of the error based on the employed functional could be established and no systematic improvement with increasing the size in the Pople's basis set was found, although for BDE values certain systematic basis set dependence was observed. Moreover, the quality of the hydrogen peroxide, hydroxyl radical and hydroxyl anion structures obtained from these functionals was compared to experimental reference data. In general, bond lengths were well reproduced and the error in the angles were between one and two degrees with some systematic trend with the basis sets. From our results we conclude that DFT methods present a computationally less expensive alternative to describe the two elementary steps of the Fenton reaction. However, choice of approximated functionals and basis sets must be carefully done and the provided benchmark allows a systematic validation of the electronic structure method to be employed

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