scholarly journals A Rapid and Sensitive Diagnosis of Typhoid Fever Based On Nested PCR-Voltammetric DNA Biosensor Using Flagellin Gene Fragment

2018 ◽  
Vol 16 (1) ◽  
pp. 87 ◽  
Author(s):  
Yeni Wahyuni Hartati ◽  
Santhy Wyantuti ◽  
M. Lutfi Firdaus ◽  
Nurul Auliany ◽  
Rini Surbakti ◽  
...  

Typhoid fever caused by Salmonella typhi is an important issue for public health in the world. Laboratory methods for rapid and sensitive diagnosis are very important for disease management. The purpose of this study was to determine the performance of nested PCR–voltammetric DNA biosensor using flagellin gene (fla) of S. typhi as a marker. The differential pulse voltammetry using pencil graphite electrode was applied to measure the guanine oxidation signal of probes vs synthetic target stDNA and probes vs fla PCR product hybridizations. The probe DNA selectivity was examined by hybridized probes vs non-complementary sequence. The result showed that the first round nested PCR product can not be visualized by agarose electrophoresis, whereas using the voltammetric biosensor methods can be detected both for the first or second round nested PCR product. The average peak current of hybridized probe vs first and second round of PCR product was 2.32 and 1.47 μA respectively, at 0.9 V. Detection of the DNA sequences of the infectious diseases from PCR amplified real sample was also carried out using this voltammetric DNA biosensor methods.

2008 ◽  
Vol 61 (12) ◽  
pp. 962 ◽  
Author(s):  
Shao-Hua Zuo ◽  
Ling-Fan Zhang ◽  
Yan-Hui Zhao ◽  
Hui-Hui Yuan ◽  
Min-Bo Lan ◽  
...  

A simple, disposable and inexpensive electrochemical DNA biosensor based on a zirconia (ZrO2) modified thin film screen-printed electrode (ZrO2/SPE) has been developed. Short DNA sequences (21 monomer units) from the Escherichia coli pathogen, modified with a phosphate group at the 5′ end, were attached to the surface of the electrode through the affinity of the phosphate group for zirconia, to produce an effective DNA probe (ssDNA/ZrO2/SPE). DNA immobilization and hybridization were characterized using differential pulse voltammetry by employing methylene blue as redox indicator. Target sequences hybridized with the probe resulted in a decrease of the reduction peak current of methylene blue intercalated into the probe. The response of a non-complementary sequence and a single base pair mismatch sequence were both clearly distinguished from that of a complementary sequence. The developed biosensor had a high selectivity and sensitivity towards hybridization detection (10–10 M complementary DNA detectable). Making use of screen-printed technology, the fabrication of the biosensors exhibited satisfactory reproducibility, investigated by cyclic voltammetry and differential pulse voltammetry. The relative standard deviation was found to be <3.0% for six bare SPEs and six ssDNA-modified SPEs (ssDNA/ZrO2/SPE) from a batch.


2010 ◽  
Vol 14 (2) ◽  
pp. 107-112 ◽  
Author(s):  
Balaji Nandagopal ◽  
Sathish Sankar ◽  
Karthikeyan Lingesan ◽  
Kumarasekharan Chandrasekharan Appu ◽  
Baby Padmini ◽  
...  

2003 ◽  
Vol 9 (3) ◽  
pp. 233-237 ◽  
Author(s):  
Muhammad Nasrum Massi ◽  
Akinobu Gotoh ◽  
Acharya Bishnu ◽  
Masato Kawabata ◽  
Toshiro Shirakawa ◽  
...  

2021 ◽  
Vol 13 (1) ◽  
pp. 73-79
Author(s):  
Haji Chomba ◽  
Ting Pan ◽  
Xinyue Zhuo ◽  
Lan Zhao ◽  
Yulin Wang ◽  
...  

Simple, cost effective, high sensitive and selective detection strategies for disease related DNA sequences in clinical diagnostics and research purposes are still on demand. Detection of DNA specific sequences of particular biomedical importance, based on electrochemical signaling, has been reported as a promising analytical approach for medical diagnostics due to its simplicity, cost effective, sensitivity, selectivity and rapidity. Herein, a simple and cost effective DNA biosensor based on poly T30 Copper Nanoparticle Signaling and biobarcode technique is presented for the first time. In this design, complementary sequence places the poly T30 modified bio-barcode probe (P2-SiO2-T30) on the sensor interface. Upon copper reduction reaction, copper nanoparticles (CuNPs) are clustered along the poly T30 modified bio-barcode probe (P2-SiO2-T30-CuNPs). During electrochemical measurements copper nanoparticles (CuNPs) are oxidized to give current signal. This detection strategy has a detection limit of 10 pM.


2016 ◽  
Vol 41 (3) ◽  
pp. 138-143
Author(s):  
Shafinaz Khan ◽  
Ruhul Amin Mia ◽  
Sumaiya Khatun

A nested polymerase chain reaction (PCR) specific for Salmonella enterica subspecies enteric serovar Typhi was used for the detection of the pathogen in blood. This study was done during the period of March 2013 to February 2014. A total of 80 clinically suspected cases of typhoid fever were included in the study. Blood was collected from all participating individuals. Nested PCR targeting the flagellin gene (fliC) of Salmonella Typhi & blood culture were done for each of the cases. The positivity rate of PCR & blood culture was 70%& 20% respectively. The positivity rate of PCR was significantly higher than blood culture (P< 0.05). With the nested PCR, S. Typhi DNAs were detected from blood specimens of 67.2% (43/64) patients among the suspected typhoid fever cases on the basis of clinical features but with negative cultures. We conclude that the PCR technique could be used as a novel diagnostic method of typhoid fever, particularly in culture-negative cases in an endemic country like Bangladesh.


2012 ◽  
Vol 50 (6) ◽  
pp. 1964-1967 ◽  
Author(s):  
Gopal Kumar ◽  
Chandra Bhan Pratap ◽  
Om Prakash Mishra ◽  
Kailash Kumar ◽  
Gopal Nath

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