scholarly journals Deciphering Natural Allelic Variation in Switchgrass for Biomass Yield and Quality Using a Nested Association Mapping Population

2016 ◽  
Author(s):  
Malay C. Saha ◽  
◽  
E. Charles Brummer ◽  
Shawn Kaeppler ◽  
Hem S. Bhandari ◽  
...  
Keyword(s):  
Association Mapping ◽  
Biomass Yield ◽  
Mapping Population ◽  
Allelic Variation ◽  
Nested Association Mapping ◽  
Yield And Quality ◽  
Nested Association Mapping Population ◽  
Association Mapping Population

scholarly journals TeoNAM: a nested association mapping population for domestication and agronomic trait analysis in maize

2019 ◽  
Author(s):  
Qiuyue Chen ◽  
Chin Jian Yang ◽  
Alessandra M. York ◽  
Wei Xue ◽  
Lora L. Daskalska ◽  
...  
Keyword(s):  
Association Mapping ◽  
Complex Traits ◽  
Agronomic Traits ◽  
Mapping Population ◽  
Allelic Variation ◽  
Recombinant Inbred Lines ◽  
Inbred Lines ◽  
Nested Association Mapping ◽  
Nested Association Mapping Population ◽  
Association Mapping Population

AbstractRecombinant inbred lines (RILs) are an important resource for mapping genes controlling complex traits in many species. While RIL populations have been developed for maize, a maize RIL population with multiple teosinte inbred lines as parents has been lacking. Here, we report a teosinte nested association mapping population (TeoNAM), derived from crossing five teosinte inbreds to the maize inbred line W22. The resulting 1257 BC1S4 RILs were genotyped with 51,544 SNPs, providing a high-density genetic map with a length of 1540 cM. On average, each RIL is 15% homozygous teosinte and 8% heterozygous. We performed joint linkage mapping (JLM) and genome-wide association study (GWAS) for 22 domestication and agronomic traits. A total of 255 QTLs from JLM were identified with many of these mapping to known genes or novel candidate genes. TeoNAM is a useful resource for QTL mapping for the discovery of novel allelic variation from teosinte. TeoNAM provides the first report that PROSTRATE GROWTH1, a rice domestication gene, is also a QTL associated with tillering in teosinte and maize. We detected multiple QTLs for flowering time and other traits for which the teosinte allele contributes to a more maize-like phenotype. Such QTL could be valuable in maize improvement.

scholarly journals Increased Power To Dissect Adaptive Traits in Global Sorghum Diversity Using a Nested Association Mapping Population

Genetics ◽  
2017 ◽  
Vol 206 (2) ◽  
pp. 573-585 ◽  
Author(s):  
Sophie Bouchet ◽  
Marcus O. Olatoye ◽  
Sandeep R. Marla ◽  
Ramasamy Perumal ◽  
Tesfaye Tesso ◽  
...  
Keyword(s):  
Association Mapping ◽  
Mapping Population ◽  
Adaptive Traits ◽  
Nested Association Mapping ◽  
Nested Association Mapping Population ◽  
Association Mapping Population

scholarly journals Resistance to greenbugs in the sorghum nested association mapping population

2019 ◽  
Vol 13 (2) ◽  
pp. 261-269 ◽  
Author(s):  
Sajjan Grover ◽  
Braden Wojahn ◽  
Suresh Varsani ◽  
Scott E. Sattler ◽  
Joe Louis
Keyword(s):  
Association Mapping ◽  
Mapping Population ◽  
Nested Association Mapping ◽  
Nested Association Mapping Population ◽  
Association Mapping Population
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