scholarly journals Gene expression profiles in primary duodenal chick cells following transfection with avian influenza virus H5 DNA plasmid encapsulated in silver nanoparticles

2013 ◽  
pp. 781 ◽  
Author(s):  
Seyed Davoud Jazayeri ◽  
Aini Ideris ◽  
Kamyar Shameli ◽  
Moeini ◽  
Abdul Rahman Omar
2016 ◽  
Vol 913 ◽  
pp. 121-127 ◽  
Author(s):  
Jiaoling Huang ◽  
Zhixun Xie ◽  
Zhiqin Xie ◽  
Sisi Luo ◽  
Liji Xie ◽  
...  

2020 ◽  
Vol 51 (1) ◽  
Author(s):  
Jing Yang ◽  
Xinmei Huang ◽  
Yuzhuo Liu ◽  
Dongmin Zhao ◽  
Kaikai Han ◽  
...  

Abstract MicroRNA (miRNA) plays a key role in virus-host interactions. Here, we employed deep sequencing technology to determine cellular miRNA expression profiles in chicken dendritic cells infected with H9N2 avian influenza virus (AIV). A total of 66 known and 36 novel miRNAs were differently expressed upon H9N2 infection, including 72 up-regulated and 30 down-regulated miRNAs. Functional analysis showed that the predicted targets of these miRNAs were significantly enriched in several pathways including endocytosis, notch, lysosome, p53, RIG-I-like and NOD-like receptor signaling pathways. These data provide valuable information for further investigating the roles of miRNA in AIV pathogenesis and host defense response.


2019 ◽  
Vol 25 (2) ◽  
pp. 110-117 ◽  
Author(s):  
Hanwei Jiao ◽  
Zonglin Zheng ◽  
Xuehong Shuai ◽  
Li Wu ◽  
Jixuan Chen ◽  
...  

H5N1 avian influenza poses a serious threat to the poultry industry and human health. Non-structural protein 1 (NS1) plays an important role in the replication and pathogenesis of avian influenza virus (AIV). However, the function of the NS1 gene is still unclear. In this study, illumina genome analyzer iix screening was used to identify the differentially expressed microRNAs (miRNAs) in HEK293 cells expressing H5N1 AIV NS1. There were 13 differentially expressed miRNAs (hsa-miR-17-5p, hsa-miR-221-3p, hsa-miR-22-3p, hsa-miR-31-5p, hsa-miR-20a-5p, hsa-miR-222-3p, hsa-miR-24-3p, hsa-miR-3613-3p, hsa-miR-3178, hsa-miR-4505, hsa-miR-345-3p, hsa-miR-3648, and hsa-miR-455-3p) ( P < 0.01). The qRT-PCR validation results demonstrated that hsa-miR-221-3p, hsa-miR-22-3p, hsa-miR-20a-5p, and hsa-miR-3613-3p were upregulated, while hsa-miR-3178 and hsa-miR-4505 were down-regulated. The softwares targetscan and miranda were further used to predict their target genes, and the gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis results showed that 20 GO terms and 20 KEGG pathways were significantly enriched. Our findings are the first to report expression profiling of miRNA and their functions in H5N1 AIV NS1-expressing HEK293 cells, and pave the way to further elucidating the accurate interaction mechanism between NS1 and virus replication, thus providing brand new insight into the prophylaxis and treatment of H5N1 AIV.


2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Su-Jin Park ◽  
Mukesh Kumar ◽  
Hyeok-il Kwon ◽  
Rak-Kyun Seong ◽  
Kyudong Han ◽  
...  

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