2P056 Domain swapping of myoglobin dimer studied by coarsegrained molecular dynamics simulations(01C. Protein: Property)

Koji Ono; Shoji Takada

doi:10.2142/biophys.53.s168_2

2P056 Domain swapping of myoglobin dimer studied by coarsegrained molecular dynamics simulations(01C. Protein: Property)

Seibutsu Butsuri ◽

10.2142/biophys.53.s168_2 ◽

2013 ◽

Vol 53 (supplement1-2) ◽

pp. S168

Author(s):

Koji Ono ◽

Shoji Takada

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Domain Swapping ◽

Protein Property ◽

Dynamics Simulations

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Molecular Dynamics Simulations of Human Cystatin C and Its L68Q Varient to Investigate the Domain Swapping Mechanism

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2007.10507162 ◽

2007 ◽

Vol 25 (2) ◽

pp. 135-144 ◽

Cited By ~ 10

Author(s):

Hsuan-Liang Liu ◽

Yuan-Min Lin ◽

Jian-Hua Zhao ◽

Man-Ching Hsieh ◽

Hsin-Yi Lin ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Cystatin C ◽

Domain Swapping ◽

Human Cystatin C ◽

Dynamics Simulations ◽

Human Cystatin

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3P075 Pressure dependence of protein conformations studied by generalized simulated tempering molecular dynamics simulations(Protein: Property,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s158_1 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S158

Author(s):

Yoshiharu Mori ◽

Yuko Okamoto

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Pressure Dependence ◽

Protein Conformations ◽

Protein Property ◽

Biophysical Society ◽

Simulated Tempering ◽

Dynamics Simulations

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Characterization of the unfolding pathway of the cell-cycle protein p13suc1 by molecular dynamics simulations: implications for domain swapping

Structure ◽

10.1016/s0969-2126(00)00083-6 ◽

2000 ◽

Vol 8 (1) ◽

pp. 101-110 ◽

Cited By ~ 26

Author(s):

Darwin OV Alonso ◽

Eric Alm ◽

Valerie Daggett

Keyword(s):

Cell Cycle ◽

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Domain Swapping ◽

Cell Cycle Protein ◽

Dynamics Simulations

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Exploring the Roles of Proline in Three-Dimensional Domain Swapping from Structure Analysis and Molecular Dynamics Simulations

The Protein Journal ◽

10.1007/s10930-017-9747-5 ◽

2017 ◽

Vol 37 (1) ◽

pp. 13-20 ◽

Cited By ~ 3

Author(s):

Yongqi Huang ◽

Meng Gao ◽

Zhengding Su

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Structure Analysis ◽

Three Dimensional ◽

Domain Swapping ◽

Dynamics Simulations ◽

Dimensional Domain

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1P050 Secondary Structure Principal Component Analysis of Protein Molecular Dynamics Simulations(01C. Protein : Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s149_2 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S149

Author(s):

Norifumi Yamamoto

Keyword(s):

Molecular Dynamics ◽

Principal Component Analysis ◽

Secondary Structure ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Principal Component ◽

Protein Property ◽

Biophysical Society ◽

Dynamics Simulations ◽

Protein Molecular Dynamics

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Molecular Dynamics Simulations To Investigate the Domain Swapping Mechanism of Human Cystatin C

Biotechnology Progress ◽

10.1021/bp060380d ◽

2008 ◽

Vol 23 (3) ◽

pp. 577-584 ◽

Cited By ~ 10

Author(s):

Yuan-Min Lin ◽

Hsuan-Liang Liu ◽

Jian-Hua Zhao ◽

Chi-Hung Huang ◽

Hsu-Wei Fang ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Cystatin C ◽

Domain Swapping ◽

Human Cystatin C ◽

Dynamics Simulations ◽

Human Cystatin

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Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants

Journal of Molecular Biology ◽

10.1016/j.jmb.2015.06.006 ◽

2015 ◽

Vol 427 (16) ◽

pp. 2697-2706 ◽

Cited By ~ 10

Author(s):

Yun Mou ◽

Po-Ssu Huang ◽

Leonard M. Thomas ◽

Stephen L. Mayo

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Domain Swapping ◽

Dynamics Simulations ◽

Protein Variants

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3P071 multibaric-multithermal molecular dynamics simulations of a polyalanine(Protein: Property,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s157_3 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S157

Author(s):

Hisashi Okumura

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Protein Property ◽

Biophysical Society ◽

Dynamics Simulations

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1P058 Molecular dynamics simulations for structure changes of PRSet7 by ligand binding(01C. Protein : Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s150_4 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S150

Author(s):

Takako Sakano ◽

Hideaki Fujitani

Keyword(s):

Molecular Dynamics ◽

Ligand Binding ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Structure Changes ◽

Protein Property ◽

Biophysical Society ◽

Dynamics Simulations

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2P052 Calculation methods for configurational entropy from molecular dynamics simulations(01C. Protein: Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s203_4 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S203

Author(s):

Simon Hikiri ◽

Takashi Yoshidome ◽

Mitsunori Ikeguchi

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Configurational Entropy ◽

Calculation Methods ◽

Protein Property ◽

Biophysical Society ◽

Dynamics Simulations

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