3P-106 Correlation of structural change in protein and hydration water : Molecular dynamic study of PYP(Water, Hydration & Electrolyte,The 47th Annual Meeting of the Biophysical Society of Japan)

Taku Mizukami; Ayumu Sugiyama; Riki Nakamura; Keisuke Matsumoto; Hiroaki Saito; Hidemi Nagao

doi:10.2142/biophys.49.s169_2

3P-106 Correlation of structural change in protein and hydration water : Molecular dynamic study of PYP(Water, Hydration & Electrolyte,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s169_2 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S169

Author(s):

Taku Mizukami ◽

Ayumu Sugiyama ◽

Riki Nakamura ◽

Keisuke Matsumoto ◽

Hiroaki Saito ◽

...

Keyword(s):

Structural Change ◽

Molecular Dynamic ◽

Annual Meeting ◽

Dynamic Study ◽

Hydration Water ◽

Molecular Dynamic Study ◽

Biophysical Society

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Imino isatin derivatives; synthesis, in silico molecular dynamic study over monoamine oxidase B, ADME prediction, and in vitro cytotoxicity evaluation

Journal of the Chinese Chemical Society ◽

10.1002/jccs.202000170 ◽

2021 ◽

Author(s):

Samaneh Ahmadi ◽

Homa Azizian ◽

Javad Azizian

Keyword(s):

Monoamine Oxidase ◽

Molecular Dynamic ◽

In Silico ◽

In Vitro Cytotoxicity ◽

Dynamic Study ◽

Monoamine Oxidase B ◽

Adme Prediction ◽

Molecular Dynamic Study ◽

Isatin Derivatives

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Molecular dynamic study of peculiarities of plastic deformation of anisotropic crystals

10.1063/5.0034141 ◽

2020 ◽

Author(s):

A. Yu. Nikonov

Keyword(s):

Plastic Deformation ◽

Molecular Dynamic ◽

Dynamic Study ◽

Molecular Dynamic Study

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Molecular dynamic study of the mechanical properties of TiAlTaN coating on a titanium substrate subjected to scratching

10.1063/5.0034153 ◽

2020 ◽

Author(s):

A. Yu. Nikonov

Keyword(s):

Mechanical Properties ◽

Molecular Dynamic ◽

Titanium Substrate ◽

Dynamic Study ◽

Molecular Dynamic Study

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1E1636 PSCDB : a database for protein structural change upon ligand binding(Genome biology, Bioinformatics,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s42_1 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S42

Author(s):

Takayuki Amemiya ◽

Ryotaro Koike ◽

Akinori Kidera ◽

Motonori Ota

Keyword(s):

Structural Change ◽

Ligand Binding ◽

Annual Meeting ◽

Genome Biology ◽

Biophysical Society

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A molecular dynamic study on the dissociation mechanism of SI methane hydrate in inorganic salt aqueous solutions

Journal of Molecular Graphics and Modelling ◽

10.1016/j.jmgm.2017.03.022 ◽

2017 ◽

Vol 75 ◽

pp. 403-412 ◽

Cited By ~ 4

Author(s):

Jiafang Xu ◽

Zhe Chen ◽

Jinxiang Liu ◽

Zening Sun ◽

Xiaopu Wang ◽

...

Keyword(s):

Aqueous Solutions ◽

Molecular Dynamic ◽

Methane Hydrate ◽

Inorganic Salt ◽

Dynamic Study ◽

Dissociation Mechanism ◽

Molecular Dynamic Study

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Identification of marine fungi-based antiviral agents as potential inhibitors of SARS-CoV-2 by molecular docking, ADMET and molecular dynamic study

Journal of Computational Biophysics and Chemistry ◽

10.1142/s2737416522500065 ◽

2021 ◽

Author(s):

Mahnoor Qaisar ◽

Shabbir Muhammad ◽

Javed Iqbal ◽

Rasheed Ahmad Khera ◽

Abdullah G. Al-Sehemi ◽

...

Keyword(s):

Molecular Docking ◽

Molecular Dynamic ◽

Marine Fungi ◽

Antiviral Agents ◽

Dynamic Study ◽

Molecular Dynamic Study ◽

Potential Inhibitors

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Asphaltene aggregation onset during high-salinity waterflooding of reservoirs (a molecular dynamic study)

Petroleum Science and Technology ◽

10.1080/10916466.2018.1506809 ◽

2018 ◽

Vol 36 (21) ◽

pp. 1725-1732 ◽

Cited By ~ 8

Author(s):

Salah Yaseen ◽

G.Ali Mansoori

Keyword(s):

Molecular Dynamic ◽

High Salinity ◽

Dynamic Study ◽

Molecular Dynamic Study

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Molecular Dynamic Study of the Behavior of Confined [BMIM][PF6] Ionic Liquids: Pore Size Dependence

Russian Journal of Physical Chemistry A ◽

10.1134/s0036024418120087 ◽

2018 ◽

Vol 92 (12) ◽

pp. 2524-2529

Author(s):

Cui Liu ◽

Hui Feng

Keyword(s):

Ionic Liquids ◽

Pore Size ◽

Molecular Dynamic ◽

Size Dependence ◽

Dynamic Study ◽

Molecular Dynamic Study

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2P132 Hydration water behavior classified by mixture model : Simulation data-mining approach(07. Water & Hydration & Electrolyte,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s216_6 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S216

Author(s):

Taku Mizukami ◽

Hieu Chi Dam ◽

Tu Bao Ho ◽

Viet Cuong Nguen

Keyword(s):

Data Mining ◽

Annual Meeting ◽

Mixture Model ◽

Model Simulation ◽

Hydration Water ◽

Simulation Data ◽

Data Mining Approach ◽

Biophysical Society ◽

Water Behavior

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Effect of a monomeric sequence on the structure of hydrated Nafion in the sandwich model and solvent dynamics in nano-channels: a molecular dynamic study

Molecular Physics ◽

10.1080/00268976.2010.511635 ◽

2010 ◽

Vol 108 (24) ◽

pp. 3393-3404 ◽

Cited By ~ 2

Author(s):

Hadi Abroshan ◽

Hamed Akbarzadeh ◽

Farid Taherkhani ◽

Gholamabbas Parsafar

Keyword(s):

Molecular Dynamic ◽

Dynamic Study ◽

Molecular Dynamic Study ◽

Solvent Dynamics ◽

Sandwich Model

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