3P-010 A study on the design of thrombin inhibitors targeting the Na^+ binding site(Protein:Structure,The 47th Annual Meeting of the Biophysical Society of Japan)

Daisuke Iyaguchi; Kouichi Uno; Eiko Toyota

doi:10.2142/biophys.49.s152_3

3P-010 A study on the design of thrombin inhibitors targeting the Na^+ binding site(Protein:Structure,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s152_3 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S152

Author(s):

Daisuke Iyaguchi ◽

Kouichi Uno ◽

Eiko Toyota

Keyword(s):

Binding Site ◽

Annual Meeting ◽

Thrombin Inhibitors ◽

Biophysical Society

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2P213 Role of PomB-F22 close to the Na+ binding site of PomB-D24 in transmembrane segments of Vibrio flagellar motor(The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s120_1 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S120

Author(s):

Takashi Terauchi ◽

Hiroyuki Terashima ◽

Seiji Kojima ◽

Michio Homma

Keyword(s):

Binding Site ◽

Annual Meeting ◽

Flagellar Motor ◽

Transmembrane Segments ◽

Biophysical Society

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3P-085 Molecular recognition of barbiturate enantiomer in agonist binding site of nicotinic acetylcholine receptor(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s140_4 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S140

Author(s):

Masayuki Ozaki ◽

Tomoyoshi Seto

Keyword(s):

Molecular Recognition ◽

Binding Site ◽

Annual Meeting ◽

Acetylcholine Receptor ◽

Nicotinic Acetylcholine Receptor ◽

Agonist Binding ◽

Nicotinic Acetylcholine ◽

Biophysical Society

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1PS051 Photo-control of microtubule flexibility using photochromic nucleotide analogue entrapped within GTP binding site of tubulin(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s83_1 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S83

Author(s):

Nozomi Furutani-Umezu ◽

Takeshi Itaba ◽

Shinsaku Maruta

Keyword(s):

Binding Site ◽

Annual Meeting ◽

Nucleotide Analogue ◽

Gtp Binding ◽

Biophysical Society

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2P-019 Binding site of C-reactive protein on M-ficolin(Protein:Structure & Function,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s109_3 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S109

Author(s):

Michikazu Tanio ◽

Toshiyuki Kohno

Keyword(s):

Binding Site ◽

Annual Meeting ◽

C Reactive Protein ◽

Reactive Protein ◽

Biophysical Society

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2PT006 Development of method for predicting carbohydrate binding site using support vector machine(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s120_4 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S120

Author(s):

Masaki Banno ◽

Kentaro Shimizu

Keyword(s):

Support Vector Machine ◽

Binding Site ◽

Annual Meeting ◽

Support Vector ◽

Carbohydrate Binding ◽

Biophysical Society ◽

Carbohydrate Binding Site

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2P344 POCASA : a novel program for prediction of protein-ligand binding site(The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s143_3 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S143

Author(s):

Jian Yu ◽

Yong Zhou ◽

Isao Tanaka ◽

Min Yao

Keyword(s):

Ligand Binding ◽

Binding Site ◽

Annual Meeting ◽

Ligand Binding Site ◽

Biophysical Society

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3PS034 Imaging analysis of Arp4p mutants in ATP-binding site(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s152_1 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S152

Author(s):

Naomichi Inaba ◽

Yuma Ito ◽

Masahiko Harata ◽

Makio Tokunaga ◽

Kumiko Sakata-Sogawa

Keyword(s):

Binding Site ◽

Annual Meeting ◽

Atp Binding ◽

Imaging Analysis ◽

Atp Binding Site ◽

Biophysical Society

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2PT101 Protein-Ligand Binding Site Prediction by Using Energy-based Method with Amino Acid Conservation Scores(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s121_4 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S121

Author(s):

Hiroto Tsujikawa ◽

Yusuke Umeda ◽

Mizuki Morita ◽

Shugo Nakamura ◽

Kentaro Shimizu

Keyword(s):

Amino Acid ◽

Ligand Binding ◽

Binding Site ◽

Annual Meeting ◽

Ligand Binding Site ◽

Site Prediction ◽

Binding Site Prediction ◽

Biophysical Society ◽

Ligand Binding Site Prediction ◽

Amino Acid Conservation

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1P149 The Mg^ binding site of the ATP synthase ε subunit from Bacillus subtilis derived by Molecular Dynamics simulations(11.Molecular motor,Poster,The 51st Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.53.s130_4 ◽

2013 ◽

Vol 53 (supplement1-2) ◽

pp. S130

Author(s):

Alexander Krah ◽

Shoji Takada

Keyword(s):

Molecular Dynamics ◽

Bacillus Subtilis ◽

Molecular Dynamics Simulations ◽

Binding Site ◽

Annual Meeting ◽

Atp Synthase ◽

Molecular Motor ◽

Biophysical Society ◽

Dynamics Simulations

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3P280 Direct interlink between the C-terminus of alpha subunit and the nucleotide binding site in G protein activation by rhodopsin(Photobiology: Vision & Photoreception,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s194_6 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S194-S195

Author(s):

Naoki Kimata ◽

Takahiro Yamashita ◽

Yasushi Imamoto ◽

Yoshinori Shichida

Keyword(s):

Binding Site ◽

Annual Meeting ◽

G Protein ◽

Nucleotide Binding ◽

Nucleotide Binding Site ◽

Alpha Subunit ◽

Protein Activation ◽

C Terminus ◽

G Protein Activation ◽

Biophysical Society

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