1P-209 Molecular dynamics studies on cholesterol effects for interactions between membranes and proteins(The 46th Annual Meeting of the Biophysical Society of Japan)

Naoya Fujita; Takashi Ishida; Kengo Kinoshita

doi:10.2142/biophys.48.s53_7

1P-209 Molecular dynamics studies on cholesterol effects for interactions between membranes and proteins(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s53_7 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S53-S54

Author(s):

Naoya Fujita ◽

Takashi Ishida ◽

Kengo Kinoshita

Keyword(s):

Molecular Dynamics ◽

Annual Meeting ◽

Biophysical Society

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1P242 1I1435 Analysis of the effect of water molecules on lipid bilayer dynamics in aqueous salt solutions using molecular dynamics simulations(Biol & Artifi memb.:Dynamics,Oral Presentations,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s62_2 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S62

Author(s):

Rina Kagawa ◽

Yoshinori Hirano ◽

Kenji Yasuoka ◽

Masato Yasui

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Lipid Bilayer ◽

Water Molecules ◽

Salt Solutions ◽

Aqueous Salt Solutions ◽

Biophysical Society ◽

Dynamics Simulations ◽

Oral Presentations

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1N1348 Quantitation of molecular dynamics and interactions in T cell activation by single-molecule microscopy with a lipid bilayer system(Bioimaging 1,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s66_5 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S66-S67

Author(s):

Yuma Ito ◽

Kumiko Sakata-Sogawa ◽

Makio Tokunaga

Keyword(s):

Molecular Dynamics ◽

T Cell ◽

Annual Meeting ◽

Lipid Bilayer ◽

T Cell Activation ◽

Single Molecule ◽

Cell Activation ◽

Single Molecule Microscopy ◽

Bilayer System ◽

Biophysical Society

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3P314 Conformational analysis of PA-glycans by replica-exchange molecular dynamics simulations(30.Miscellaneous topics,Poster,The 51st Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.53.s264_1 ◽

2013 ◽

Vol 53 (supplement1-2) ◽

pp. S264

Author(s):

Shigehisa Watanabe ◽

Suyong Re ◽

Eiro Muneyuki ◽

Yuji Sugita

Keyword(s):

Molecular Dynamics ◽

Conformational Analysis ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Replica Exchange ◽

Replica Exchange Molecular Dynamics ◽

Biophysical Society ◽

Dynamics Simulations

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1P-030 Analysis of Tension Sensing Sites of E-coli Mechanosensitive Channel MscL Using Molecular Dynamics Simulations(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s25_4 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S25

Author(s):

Yasuyuki Sawada ◽

Masaki Murase ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Mechanosensitive Channel ◽

E Coli ◽

Biophysical Society ◽

Dynamics Simulations

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3B1010 Molecular dynamics simulations of dynein motor domain in explicit water(Proteins:Structure & Function III:Dynamics and Circadian Rhythm,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s58_4 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S58

Author(s):

Narutoshi Kamiya ◽

Tadaaki Mashimo ◽

Yu Takano ◽

Takahide Kon ◽

Genji Kurisu ◽

...

Keyword(s):

Molecular Dynamics ◽

Circadian Rhythm ◽

Molecular Dynamics Simulations ◽

Annual Meeting ◽

Oral Presentation ◽

Motor Domain ◽

Dynein Motor ◽

Biophysical Society ◽

Dynamics Simulations ◽

Explicit Water

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1N1336 Spatio-temporal quantitative analysis of molecular dynamics and interactions in cells using multicolor single-molecules imaging(Bioimaging 1,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s66_4 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S66

Author(s):

Katsuo Ichinomiya ◽

Timothy J Stasevich ◽

Hiroshi Kimura ◽

Kumiko Sakata-Sogawa ◽

Makio Tokunaga

Keyword(s):

Molecular Dynamics ◽

Quantitative Analysis ◽

Annual Meeting ◽

Single Molecules ◽

Biophysical Society ◽

Spatio Temporal ◽

In Cells

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1P061 High-pressure molecular dynamics study on the thermodynamics and structures of helical peptides(01C. Protein : Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s151_1 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S151

Author(s):

Yoshiharu Mori ◽

Hisashi Okumura

Keyword(s):

Molecular Dynamics ◽

High Pressure ◽

Annual Meeting ◽

Helical Peptides ◽

Protein Property ◽

Biophysical Society

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1P263 Molecular Dynamics study on the mechanical difference in the LOV2-kinase domain interaction between photol and photo2(Photobiology:Vision & Photoreception,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s66_1 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S66

Author(s):

hideyuki takeda ◽

kazunori jikihara ◽

satoru tokutomi ◽

minoru sakurai

Keyword(s):

Molecular Dynamics ◽

Annual Meeting ◽

Kinase Domain ◽

Domain Interaction ◽

Biophysical Society

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3P243 Analysis of the photoresponse mechanism of the LOV-HTH system using accelerated molecular dynamics simulation(Photobiology: Vision & Photoreception,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s289_3 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S289

Author(s):

Kokubu Tetsuo ◽

Furuta Tadaomi ◽

Sakurai Minoru

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Annual Meeting ◽

Dynamics Simulation ◽

Accelerated Molecular Dynamics ◽

Biophysical Society

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1P204 Structure and orientation of hydrating water molecules at phospholipid/water interface revealed by molecular dynamics simulation(13A. Biological & Artificial membrane: Structure & Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s174_6 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S174

Author(s):

Suyong Re ◽

Wataru Nishima ◽

Tahei Tahara ◽

Yuji Sugita

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Annual Meeting ◽

Membrane Structure ◽

Dynamics Simulation ◽

Water Molecules ◽

Water Interface ◽

Structure Property ◽

Artificial Membrane ◽

Biophysical Society

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