2P145 Mechanical principle of the motor protein KIF1A studied by molecular dynamics simulation(Molecular motors,Poster Presentations)

Takeshi Kuwata; Kei-ichi Okazaki; Rie Tatsumi; Nobuyasu Koga; Shoji Takada

doi:10.2142/biophys.47.s149_2

2P145 Mechanical principle of the motor protein KIF1A studied by molecular dynamics simulation(Molecular motors,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s149_2 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S149

Author(s):

Takeshi Kuwata ◽

Kei-ichi Okazaki ◽

Rie Tatsumi ◽

Nobuyasu Koga ◽

Shoji Takada

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Molecular Motors ◽

Motor Protein ◽

Dynamics Simulation ◽

Poster Presentations

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3P168 How many phospholipids plug a central cavity of c-ring in F-type ATP synthase? : a molecular dynamics simulation approach(Molecular motors,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s245_1 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S245

Author(s):

Sotaro Fuchigami ◽

Kyoko Nakajima ◽

Mitsunori Ikeguchi ◽

Akinori Kidera

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Atp Synthase ◽

Molecular Motors ◽

Dynamics Simulation ◽

Simulation Approach ◽

Central Cavity ◽

Poster Presentations

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3P167 Molecular dynamics simulation of proton diffusion process into Fo motor(Molecular motors,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s244_4 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S244

Author(s):

Hisatsugu Yamasaki ◽

Mitsunori Takano

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Diffusion Process ◽

Molecular Motors ◽

Dynamics Simulation ◽

Proton Diffusion ◽

Poster Presentations

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2P010 Molecular dynamics simulation of the terminal oxygenase component of carbazole 1,9a-dioxygenase(Proteins-structure and structure-function relationship,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s115_3 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S115

Author(s):

Yu Inoue ◽

Tohru Terada ◽

Shugo Nakamura ◽

Kentaro Shimizu

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Structure Function ◽

Dynamics Simulation ◽

Structure Function Relationship ◽

Function Relationship ◽

Poster Presentations

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1P128 Molecular dynamics simulation of the 70S ribosome and nascent polypeptide passing through the exit tunnel(Nucleic acid,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s55_3 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S55

Author(s):

Hisashi Ishida ◽

Kei Yura

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Nucleic Acid ◽

Dynamics Simulation ◽

Nascent Polypeptide ◽

70S Ribosome ◽

Exit Tunnel ◽

Poster Presentations

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2P056 Dynamics and hydration structure of Eco109I studied by small-angle X-ray scattering experiment and molecular dynamics simulation(Proteins-structure and structure-function relationship,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s127_1 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S127

Author(s):

Tomotaka Oroguchi ◽

Mamoru Sato ◽

Mitsunori Ikeguchi

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Structure Function ◽

Small Angle ◽

Dynamics Simulation ◽

X Ray ◽

X Ray Scattering ◽

Scattering Experiment ◽

Function Relationship ◽

Poster Presentations

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Molecular mechanisms of the rotary motor protein F1-ATPase: Molecular dynamics simulation by applying folding model

Seibutsu Butsuri ◽

10.2142/biophys.43.s97_4 ◽

2003 ◽

Vol 43 (supplement) ◽

pp. S97

Author(s):

N. Koga ◽

S. Takada

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Molecular Mechanisms ◽

Motor Protein ◽

Dynamics Simulation ◽

Folding Model ◽

F1 Atpase ◽

Rotary Motor

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3P084 Molecular dynamics simulation of the oligomer formation accompanied by conformational change(Proteins-stability, folding, and other physicochemical properties,Poster Presentations)

Seibutsu Butsuri ◽

10.2142/biophys.47.s224_1 ◽

2007 ◽

Vol 47 (supplement) ◽

pp. S224

Author(s):

Fumiko Takagi ◽

Macoto Kikuchi

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Physicochemical Properties ◽

Conformational Change ◽

Dynamics Simulation ◽

Oligomer Formation ◽

Poster Presentations

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Molecular dynamics simulation of the bio-adhesion in molecular motors

2005 IEEE International Conference on Robotics and Biomimetics - ROBIO ◽

10.1109/robio.2005.246291 ◽

2005 ◽

Author(s):

Zhenyu Yang ◽

Quan Ren ◽

Ya-Pu Zhao

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Molecular Motors ◽

Dynamics Simulation

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Molecular dynamics simulation toward elucidating the way how molecular motors work

Seibutsu Butsuri ◽

10.2142/biophys.43.s140_3 ◽

2003 ◽

Vol 43 (supplement) ◽

pp. S140

Author(s):

M. Takano ◽

T.P. Terada ◽

M. Sasai

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Molecular Motors ◽

Dynamics Simulation ◽

The Way

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2O1630 Molecular mechanisms of the rotary motor protein F1-ATPase : molecular dynamics simulation

Seibutsu Butsuri ◽

10.2142/biophys.42.s147_2 ◽

2002 ◽

Vol 42 (supplement2) ◽

pp. S147

Author(s):

N. Koga ◽

Shoji S.

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Molecular Mechanisms ◽

Motor Protein ◽

Dynamics Simulation ◽

F1 Atpase ◽

Rotary Motor

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