1P202 Computational analyses of mechanisms of large conformational changes for switching of distinct catalytic reactions of an enzyme(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Cong Yulong; Yohsuke Hagiwara; Masaru Tateno

doi:10.2142/biophys.46.s197_2

1P202 Computational analyses of mechanisms of large conformational changes for switching of distinct catalytic reactions of an enzyme(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s197_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S197

Author(s):

Cong Yulong ◽

Yohsuke Hagiwara ◽

Masaru Tateno

Keyword(s):

Nucleic Acid ◽

Conformational Changes ◽

Poster Session ◽

Binding Protein ◽

Catalytic Reactions ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program ◽

Computational Analyses

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1P204 The switch of transcription induced by UV-damaged DNA(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s197_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S197

Author(s):

Takashi Miyamoto ◽

Motoki Susa ◽

Nobuo Shimamoto

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program ◽

Damaged Dna

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1P212 The relationship between conformation and activity of NifA(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s199_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S199

Author(s):

Hisayoshi Tsuihiji ◽

Yoichi Yamazaki ◽

Hironari Kamikubo ◽

Mikio Kataoka

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program ◽

The Relationship

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1P209 Correlation between rpoD alleles and upper limits of growing temperature.(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s199_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S199

Author(s):

Akiko Hatakeyama ◽

Yumiko Sato ◽

Hiroki Nagai ◽

Hideki Nakayama ◽

Nobuo Shimamoto

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program ◽

Upper Limits

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1P208 Possible contradiction of the consensus mechanism of E. coli sigma-70 and the observed activity of its N- terminus half proteins(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s198_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S198

Author(s):

Suganthan Rajan Babu ◽

Yumiko Sato ◽

Shoji Yagi ◽

Gyedu Ampaabeng ◽

Nobuo Shimamoto

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

E Coli ◽

Acid Binding Protein ◽

Meeting Program ◽

N Terminus ◽

Sigma 70

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1P198 Reaction mechanism of bacterial Glu-tRNA^-dependent amidotransferase(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s196_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S196

Author(s):

Akiyoshi Nakamura ◽

Min Yao ◽

Sarin Chimnaronk ◽

Naoki Sakai ◽

Isao Tanaka

Keyword(s):

Reaction Mechanism ◽

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program

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1P201 Analysis of Aquifex MnmC2 tRNA modification enzyme for two codon set of genetic code.(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s197_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S197

Author(s):

Madoka Nishimoto ◽

Rie Shibata ◽

Emiko Fusatomi ◽

Takaho Terada ◽

Mikako Shirouzu ◽

...

Keyword(s):

Nucleic Acid ◽

Genetic Code ◽

Poster Session ◽

Binding Protein ◽

Trna Modification ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program ◽

Modification Enzyme

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1P220 The DNA-recognition fold of Sso7c4 suggests an ancestral role in the evolution of β-barrel protein family(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s201_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S201

Author(s):

Chun-Hua Hsu ◽

Andrew H. -J. Wang

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Dna Recognition ◽

Protein Family ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program

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1P217 Structural and functional characterization of BldD, an essential developmental regulator of Streptomyces coelicolor(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s201_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S201

Author(s):

Chang-Jin Lee ◽

Jeong-Mok Kim ◽

In-Kwon Kim ◽

Sa-Ouk Kang

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Streptomyces Coelicolor ◽

Functional Characterization ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program

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1P205 The closed structure of an archaeal DNA ligase from Pyrococcus furiosus(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s198_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S198

Author(s):

Hirokazu Nishida ◽

Shinichi Kiyonari ◽

Yoshizumi Ishino ◽

Kosuke Morikawa

Keyword(s):

Nucleic Acid ◽

Poster Session ◽

Pyrococcus Furiosus ◽

Binding Protein ◽

Dna Ligase ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Acid Binding Protein ◽

Meeting Program ◽

Closed Structure

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1P200 Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA^ and ATP analogue(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s196_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S196

Author(s):

Tomomi Sumida ◽

Tatsuo Yanagisawa ◽

Yukie Mori ◽

Shigeyuki Yokoyama ◽

Michiko Konno

Keyword(s):

Crystal Structure ◽

Nucleic Acid ◽

Poster Session ◽

Binding Protein ◽

Trna Synthetase ◽

Nucleic Acid Binding ◽

Nucleic Acid Binding Protein ◽

Pyrococcus Horikoshii ◽

Acid Binding Protein ◽

Meeting Program

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