1P146 Attempt to understand the information encoded in the amino acid sequence of photoactive yellow protein by the simplification of sequence(4. Protein engineering,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Kumiko Shirai; Yoichi Yamazaki; Hironari Kamikubo; Yasushi Imamoto; Mikio Kataoka

doi:10.2142/biophys.46.s183_2

1P146 Attempt to understand the information encoded in the amino acid sequence of photoactive yellow protein by the simplification of sequence(4. Protein engineering,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s183_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S183

Author(s):

Kumiko Shirai ◽

Yoichi Yamazaki ◽

Hironari Kamikubo ◽

Yasushi Imamoto ◽

Mikio Kataoka

Keyword(s):

Amino Acid ◽

Protein Engineering ◽

Amino Acid Sequence ◽

Poster Session ◽

Photoactive Yellow Protein ◽

Meeting Program

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1P470 Amino acid sequence analysis of motor protein by physical finger print method(23. Bioinformatics, genomics and proteomics (I),Poster Session,Abstract,Meeting Program of EABS &BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s264_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S264

Author(s):

Hideki Tanizawa ◽

Shigeki Mitaku

Keyword(s):

Amino Acid ◽

Sequence Analysis ◽

Amino Acid Sequence ◽

Poster Session ◽

Motor Protein ◽

Amino Acid Sequence Analysis ◽

Finger Print ◽

Meeting Program ◽

Genomics And Proteomics

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1P148 Study of expression of PSD-95 in neuron-glia mixed culture cells using adenovirus(4. Protein engineering,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s183_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S183

Author(s):

Atsuo Miyazawa ◽

Hyeji Kim ◽

Yuko Fukunaga

Keyword(s):

Protein Engineering ◽

Mixed Culture ◽

Poster Session ◽

Meeting Program ◽

Culture Cells

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1P142 Site-selective deposition of ferritin on the patterned silicon substrates(4. Protein engineering,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s182_2 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S182

Author(s):

Akira Yamazaki ◽

Hiroko Fukano ◽

Hideyuki Yoshimura

Keyword(s):

Protein Engineering ◽

Poster Session ◽

Silicon Substrates ◽

Selective Deposition ◽

Meeting Program ◽

Site Selective

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2P323 Structural determinants of the ligand specificities of the bacterial amino acid chemoreceptors(42. Sensory signal transduction,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s376_3 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S376

Author(s):

Hirotaka Tajima ◽

Katsumi Imada ◽

Mayuko Sakuma ◽

Fumiyuki Hattori ◽

Midori Sumii ◽

...

Keyword(s):

Signal Transduction ◽

Amino Acid ◽

Poster Session ◽

Structural Determinants ◽

Sensory Signal ◽

Meeting Program

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1P416 A theoretical study on the proteinquake of photoactive yellow protein(17. Light driven system,Poster Session,Abstract,Meeting Program of EABS &BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s250_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S250

Author(s):

Kana Koike ◽

Takehisa Yamato

Keyword(s):

Poster Session ◽

Theoretical Study ◽

Photoactive Yellow Protein ◽

Meeting Program ◽

Driven System

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Attempt to simplify the amino-acid sequence of photoactive yellow protein with a set of simple rules

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.21331 ◽

2007 ◽

Vol 67 (4) ◽

pp. 821-833 ◽

Cited By ~ 6

Author(s):

Kumiko Shirai ◽

Yoichi Yamazaki ◽

Hironari Kamikubo ◽

Yasushi Imamoto ◽

Mikio Kataoka

Keyword(s):

Amino Acid ◽

Amino Acid Sequence ◽

Photoactive Yellow Protein ◽

Simple Rules

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2P073 Quantitative analysis of conservation of amino acid residues critical for protein-protein interaction(30. Protein function (II),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s314_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S314

Author(s):

Hiroyuki Oda ◽

Hiroyuki Toh ◽

Kazutaka Katoh

Keyword(s):

Quantitative Analysis ◽

Amino Acid ◽

Protein Interaction ◽

Protein Function ◽

Poster Session ◽

Amino Acid Residues ◽

Protein Protein Interaction ◽

Meeting Program

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2P343 Isolation of Photoactive Yellow Protein associated protein from Rhodobacter capsulatus(42. Sensory signal transduction,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s381_3 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S381

Author(s):

Yoichi Yamazaki ◽

Hironari Kamikubo ◽

Yasushi Imamoto ◽

Mikio Kataoka

Keyword(s):

Signal Transduction ◽

Poster Session ◽

Rhodobacter Capsulatus ◽

Photoactive Yellow Protein ◽

Sensory Signal ◽

Meeting Program

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1P133 A method to evaluate heme-binding affinity on the protein theoretical model(4. Protein engineering,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s180_1 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S180

Author(s):

Yukiko Takai ◽

Motonori Ota ◽

Yasuhiro Isogai

Keyword(s):

Theoretical Model ◽

Protein Engineering ◽

Binding Affinity ◽

Poster Session ◽

Heme Binding ◽

Meeting Program

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1P100 Effect of single amino acid substitutions on kinetic properties of folding studied by a statistical mechanical model of lattice proteins(3. Protein folding and misfolding (I),Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Seibutsu Butsuri ◽

10.2142/biophys.46.s171_4 ◽

2006 ◽

Vol 46 (supplement2) ◽

pp. S171

Author(s):

Haruo Abe ◽

Hiroshi Wako

Keyword(s):

Amino Acid ◽

Mechanical Model ◽

Poster Session ◽

Single Amino Acid ◽

Kinetic Properties ◽

Amino Acid Substitutions ◽

Meeting Program ◽

Statistical Mechanical Model ◽

Statistical Mechanical ◽

Lattice Proteins

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