scholarly journals Analysis of C-peptide of ribonuclease A studied by replica-exchange Monte Carlo method and diffusion theory

2003 ◽  
Vol 43 (supplement) ◽  
pp. S92
Author(s):  
A. Mitsutake ◽  
Giovanni Penna ◽  
Y. Okamoto
Keyword(s):  
Monte Carlo ◽  
Monte Carlo Method ◽  
Diffusion Theory ◽  
Ribonuclease A ◽  
Replica Exchange ◽  
C Peptide ◽  
Replica Exchange Monte Carlo ◽  
And Diffusion

Ab initio replica-exchange Monte Carlo method for cluster studies

2001 ◽  
Vol 333 (1-2) ◽  
pp. 199-206 ◽  
Author(s):  
Yasuyuki Ishikawa ◽  
Yuji Sugita ◽  
Takeshi Nishikawa ◽  
Yuko Okamoto
Keyword(s):  
Monte Carlo ◽  
Monte Carlo Method ◽  
Ab Initio ◽  
Replica Exchange ◽  
Replica Exchange Monte Carlo

scholarly journals Replica Exchange Monte Carlo Method for Proton and X-Ray Induced DNA Damage and Repair

2021 ◽  
Vol 120 (3) ◽  
pp. 290a
Author(s):  
Thienbao N. Carpency ◽  
Megan Cordone ◽  
Camila Quintero Hilsaca ◽  
Zachary Condon ◽  
Sarah Castro
Keyword(s):  
Dna Damage ◽  
Monte Carlo ◽  
Monte Carlo Method ◽  
Replica Exchange ◽  
Dna Damage And Repair ◽  
X Ray ◽  
Replica Exchange Monte Carlo

scholarly journals Replica-Exchange Monte Carlo Method Incorporating Auto-tuning Algorithm Based on Acceptance Ratios for Effective Bayesian Spectroscopy

2021 ◽  
Vol 90 (10) ◽  
pp. 104004
Author(s):  
Kazunori Iwamitsu ◽  
Yudai Nishi ◽  
Taiga Yamasaki ◽  
Mao Kamezaki ◽  
Kyohei Higashiyama ◽  
...  
Keyword(s):  
Monte Carlo ◽  
Monte Carlo Method ◽  
Replica Exchange ◽  
Replica Exchange Monte Carlo ◽  
Auto Tuning

Replica-exchange Monte Carlo method for the isobaric–isothermal ensemble

2001 ◽  
Vol 335 (5-6) ◽  
pp. 435-439 ◽  
Author(s):  
Tsuneyasu Okabe ◽  
Masaaki Kawata ◽  
Yuko Okamoto ◽  
Masuhiro Mikami
Keyword(s):  
Monte Carlo ◽  
Monte Carlo Method ◽  
Replica Exchange ◽  
Replica Exchange Monte Carlo

Development of SAAP3D force field and the application to replica-exchange Monte Carlo simulation for chignolin and C-peptide

2017 ◽  
Vol 31 (12) ◽  
pp. 1039-1052 ◽  
Author(s):  
Michio Iwaoka ◽  
Toshiki Suzuki ◽  
Yuya Shoji ◽  
Kenichi Dedachi ◽  
Taku Shimosato ◽  
...  
Keyword(s):  
Monte Carlo Simulation ◽  
Monte Carlo ◽  
Force Field ◽  
Replica Exchange ◽  
C Peptide ◽  
Replica Exchange Monte Carlo
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