A comparison of multivariate regression tree and two-way indicator species analysis in plant community classification

2015 ◽  
Vol 39 (6) ◽  
pp. 586-592
Author(s):  
ZHANG Wen-Jing ◽  
◽  
ZHANG Qin-Di ◽  
WANG Jing ◽  
FENG Fei ◽  
...  
Keyword(s):  
Plant Community ◽  
Indicator Species ◽  
Multivariate Regression ◽  
Regression Tree ◽  
Indicator Species Analysis ◽  
Multivariate Regression Tree ◽  
Community Classification ◽  
Species Analysis ◽  
Plant Community Classification

Spring Bird Community Structure in Response to Habitat Heterogeneity in a Subtropical Hilly Landscape

2014 ◽  
Vol 1010-1012 ◽  
pp. 121-125
Author(s):  
Wen Bin Li ◽  
Zhi Ming Mo ◽  
Xing Ting Chen ◽  
Chun Huang ◽  
Ming Feng Xu
Keyword(s):  
Indicator Species ◽  
Habitat Heterogeneity ◽  
Southern China ◽  
Bird Species ◽  
Bird Communities ◽  
Bird Diversity ◽  
Indicator Species Analysis ◽  
Heterogeneous Habitats ◽  
Species Analysis ◽  
The Impact

To examine the impact of habitat heterogeneity on the bird communities, we investigated the structural differences of various bird communities occurring in heterogeneous habitats in the subtropical hilly areas of southern China. We used indicator Species Analysis (ISA) to test the association of specific bird species to particular habitats. We performed Two-way Cluster Analysis to find species patterning in response to habitat fragmentation. Our results demonstrated that heterogeneous habitats promoted bird diversity and human activities affected bird behavior. Indicator Species Analysis demonstrated that similar habitats had similar bird communities, while different habitats supported various bird indicator species. Although habitat diversity increased bird diversity of a region, it was unfavorable for the maintenance of specialized birds in the forests of the subtropical hilly area.

Two Way Indicator Species Analysis (TWINSPAN) of the Herbaceous Vegetation in an Inland Wetland Ecosystem of Doon Valley Himalaya, India

1970 ◽  
Vol 3 ◽  
pp. 23-31 ◽  
Author(s):  
R. K. Manhas ◽  
M. K. Gautam ◽  
Deepa Kumari
Keyword(s):  
Soil Moisture ◽  
Key Words ◽  
Plant Species ◽  
Indicator Species ◽  
Indigenous Species ◽  
Indicator Species Analysis ◽  
Wetland Ecosystem ◽  
Herbaceous Vegetation ◽  
Doon Valley ◽  
Species Analysis

In swamp distribution, dominance and survival of a species is very much governed by the soil moisture and period of flooding. The present study was conducted to classify the communities and plant species, and to have an idea about various associations of plants present in the swamp with respect to soil moisture. Two way indicator species analysis (TWINSPAN) classified the communities into four and plant species into eleven groups. The communities with least soil moisture were the first to be segregated and with highest soil moisture last. Similarly, the species growing in drier condition was clustered separately from the moisture loving indigenous species. Key words: TWINSPAN; vegetation; inland wetland; India DOI: 10.3126/jowe.v3i0.2433 Journal of Wetlands Ecology, (2009) Vol. 3, pp 23-31

scholarly journals Fibroblast Growth Factor 23 and α-Klotho Protein Are Associated with Adverse Clinical Outcomes in Non-Dialysis CKD Patients

2020 ◽  
Vol 45 (6) ◽  
pp. 900-915
Author(s):  
Eleni Manou ◽  
Elias Thodis ◽  
Georgios Arsos ◽  
Ploumis Pasadakis ◽  
Stylianos Panagoutsos ◽  
...  
Keyword(s):  
Clinical Outcomes ◽  
Primary Endpoint ◽  
Multivariate Regression ◽  
Fibroblast Growth Factor 23 ◽  
Regression Tree ◽  
Fibroblast Growth ◽  
Multivariate Regression Tree ◽  
Regression Tree Analysis ◽  
Klotho Protein ◽  
Fgf 23

<b><i>Background:</i></b> Fibroblast growth factor 23 (FGF-23) and α-Klotho protein appear to have an important role in the pathogenesis of CKD-mineral and bone disorders. The aim of this study was to investigate the association of FGF-23 and α-Klotho levels with adverse clinical outcomes in patients with non-dialysis CKD. <b><i>Materials and Methods:</i></b> We conducted a prospective cohort study, enrolling participants with non-dialysis CKD from a single center in Greece. At enrollment, glomerular filtration rate (GFR) was measured (mGFR) and plasma levels of carboxyl terminal FGF-23 (cFGF-23) and soluble α-Klotho (sKlotho) were determined by enzyme-linked immunoassay. Participants were followed for up to 5 years or until the occurrence of the primary endpoint of initiation of renal replacement therapy or death. Multivariate regression tree analysis was used to identify informative baseline parameters in order to categorize participants. Also, using median values of cFGF-23 and sKlotho, participants were categorized into 4 groups, in whom survival was compared using Kaplan-Meier and Cox regression analysis. <b><i>Results:</i></b> 128 participants were enrolled with a median mGFR of 41.5 mL/min/1.73 m<sup>2</sup> (IQR = 28.2). Baseline mGFR correlated with cFGF-23 and sKlotho (<i>r</i> = −0.54 and <i>r</i> = 0.49, respectively; <i>p</i> &#x3c; 0.0001 for both). cFGF-23 and sKlotho levels correlated negatively (<i>r</i> = −0.24, <i>p</i> = 0.006). Multivariate regression tree analysis resulted in 3 groups defined by cutoff values of mGFR (60.9 mL/min/1.73 m<sup>2</sup>) and phosphate (3.7 mg/dL). These groups correlated with CKD stage, cFGF-23, and sKlotho (<i>p</i> &#x3c; 0.0001 for all). During a median follow-up of 36 months (IQR = 22), 40 (31.2%) participants reached the primary endpoint (31 initiated renal replacement therapy, 9 died). Survival to primary endpoint differed among the 4 groups formed using median values of both biomarkers, with the low FGF-23/high Klotho and high FGF-23/low Klotho having the longest and shortest survival, respectively. High FGF-23/low Klotho group, compared to the opposite one, had a significantly elevated risk of the primary outcome (HR, 6.8; 95% CI, 2.3–19.6; <i>p</i> = 0.0004). <b><i>Conclusions:</i></b> In patients with CKD stages 1–5, the combination of higher cFGF-23 and lower sKlotho levels along with mGFR and serum phosphate was associated with adverse clinical outcomes. The utility of combinations of traditional and novel biomarkers to predict outcomes warrants further study.

scholarly journals A vegetation survey of the Tsitsikamma Coastal National Park

Koedoe ◽  
1989 ◽  
Vol 32 (1) ◽  
Author(s):  
N. Hanekom ◽  
A. Southwood ◽  
M. Ferguson
Keyword(s):  
Correspondence Analysis ◽  
Indicator Species ◽  
National Park ◽  
Detrended Correspondence Analysis ◽  
Indicator Species Analysis ◽  
Vegetation Survey ◽  
Afromontane Forest ◽  
Species Analysis ◽  
North And South

Sampling plots (5 m x 10 m in fynbos, 10 m x 10 m in forest) were analysed in the littoral, coastal escarpment, and north and south facing inland escarp- ment zones of 17 transect sites along the length of the Tsitsikamma Coastal National Park. Cover- abundance values were estimated for each species in the sampling plots. A detrended correspondence analysis (using CANOCO) and a two way indicator species analysis (TWINSPAN) were carried out on these data to determine the communities sampled. The vegetation of the park was classified into an Afromontane Forest, a Littoral Herbland and two Mesic Mountain Fynbos Communities. The distribution and extent of these communities were determined and their conservation discussed.

scholarly journals Estrutura e relações ambientais de grupos florísticos em fragmento de floresta estacional subtropical

2013 ◽  
Vol 37 (2) ◽  
pp. 275-287 ◽  
Author(s):  
Suzane Bevilacqua Marcuzzo ◽  
Maristela Machado Araújo ◽  
Solon Jonas Longhi
Keyword(s):  
Indicator Species ◽  
Indicator Species Analysis ◽  
M 10 ◽  
Species Analysis ◽  
Em 12

Este estudo teve por objetivos analisar a estrutura de grupos florísticos na vegetação arbórea-arbustiva de um trecho de encosta de Floresta Estacional Subtropical, no Parque Estadual Quarta Colônia, RS, e determinar fatores ambientais importantes na ocorrência das espécies, a fim de subsidiar programas de restauração de áreas degradadas como ecossistema de referência. Para isso, foi realizado estudo fitossociológico em 12 parcelas de 200 m² (10 x 20 m), distantes 20 m entre si, distribuídas sistematicamente em quatro faixas de 100 m entre si, seguindo gradiente de topografia. Em cada parcela foram realizadas a identificação e a medição da circunferência à altura do peito (CAP) e da altura total dos indivíduos arbóreos e arbustivos, ou seja, com CAP > 15 cm, denominado componente arbóreo. Os dados do sub-bosque foram obtidos em parcelas circulares com raio de 1,78 m, instaladas no centro das parcelas de 10 x 20 m, medindo-se indivíduos com altura > 30 cm e CAP <15 cm. As variáveis ambientais foram compostas pela declividade, pela intensidade luminosa, pelas características químicas e textura do solo. Os dados foram analisados segundo a estrutura e diversidade da vegetação por meio da análise de agrupamento pelo método TWINSPAN (Two-way Indicator Species Analysis) e da ordenação pelo método CCA (Análise de Correspondência Canônica). Foi identificada a formação de dois grupos florísticos. A composição de espécies de cada grupo pertence a diferentes estágios de sucessão natural, conforme histórico de uso agrícola, e, segundo suas características funcionais, podem ser indicadas para programas de restauração florestal.

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