scholarly journals Enzymatic activity and culturable bacteria diversity in rhizosphere of amaranth, as indicators of crop phenological changes

2018 ◽  
Vol 96 (4) ◽  
pp. 640
Author(s):  
Iván Pável Moreno-Espíndola ◽  
María Jesús Ferrara-Guerrero ◽  
Fernando De León-González ◽  
Facundo Rivera-Becerril ◽  
Lino Mayorga-Reyes ◽  
...  

<p><strong>Background</strong>: Amaranth is a plant of interest in farming due to its ability to adapt into arid and semi-arid climates. Biological activity by microorganisms in rhizosphere determines plant performance and quality.</p><p><strong>Hypothesis:</strong> The enzymatic activity is different in two types of soil, rhizosheath soil (adhered by roots) and loose soil (non-adhered by roots), in four cropping periods of amaranth.</p><p><strong>Species study:</strong> <em>Amaranthus hypochondriacus</em> L.</p><p><strong>Methods:</strong> Parameters of soil organic matter and several enzyme activities in the amaranth rhizosphere were assessed. Two types of soil, rhizosheath soil and loose soil, and four cropping periods were compared. Thirty-seven culturable bacterial isolates obtained from rhizosheath soil were molecularly identified.</p><p><strong>Results:</strong> Rhizosheath soil had higher content of carbon and total nitrogen compared with loose soil; however, potential enzyme activity in both soil types was similar. Dehydrogenase and acid phosphatase activities were very sensitive to the crops phenological stages. Acid and alkaline phosphatases, cellulase and protease activities correlated to changes in soil moisture. The greatest diversity of culturable bacteria was found during the flowering stage.</p><strong>Conclusions:</strong> In the rhizosphere of <em>A. hypochondriacus</em> grown in a pumiceous sandy soil, enzymatic activities in the rhizosheath and loose soils were similar, which must be considered a unique rhizosphere environment. Dehydrogenase and acid phosphatase activities were highly sensitive to changes in the crop phenology. The behavior of phosphatases and dehydrogenase activities suggests an increased dynamic soil organic matter (SOM) during the post-harvest period. In the amaranth rhizosphere, native culturable bacteria are involved in the breakdown of SOM.

2016 ◽  
Vol 25 (2) ◽  
pp. 213 ◽  
Author(s):  
Kajar Köster ◽  
Frank Berninger ◽  
Jussi Heinonsalo ◽  
Aki Lindén ◽  
Egle Köster ◽  
...  

In boreal forest ecosystems fire, fungi and bacteria, and their interactions, have a pronounced effect on soil carbon dynamics. In this study we measured enzymatic activities, litter decomposition rates, carbon stocks and fungal and microbial biomasses in a boreal subarctic coniferous forest on a four age classes of non-stand replacing fire chronosequence (2, 42, 60 and 152 years after the fire). The results show that microbial activity recovered slowly after fire and the decomposition of new litter was affected by the disturbance. The percent mass loss of Scots pine litter increased with time from the last fire. Slow litter decomposition during the first post-fire years accelerates soil organic matter accumulation that is essential for the recovery of soil biological activities. Fire reduced the enzymatic activity across all the enzyme types measured. Carbon-degrading, chitin-degrading and phosphorus-dissolving enzymes showed different responses with the time elapsed since the fire disturbance. Microbial and enzymatic activity took decades before recovering to the levels observed in old forest stands. Our study demonstrates that slower post-fire litter decomposition has a pronounced impact on the recovery of soil organic matter following forest fires in northern boreal coniferous forests.


2013 ◽  
Vol 37 (1) ◽  
pp. 55-65 ◽  
Author(s):  
Adriana Rodolfo da Costa ◽  
Juliana Hiromi Sato ◽  
Maria Lucrécia Gerosa Ramos ◽  
Cícero Célio de Figueiredo ◽  
Géssica Pereira de Souza ◽  
...  

Phosphorus fertilization and irrigation increase coffee production, but little is known about the effect of these practices on soil organic matter and soil microbiota in the Cerrado. The objective of this study was to evaluate the microbiological and oxidizable organic carbon fractions of a dystrophic Red Latossol under coffee and split phosphorus (P) applications and different irrigation regimes. The experiment was arranged in a randomized block design in a 3 x 2 factorial design with three split P applications (P1: 300 kg ha-1 P2O5, recommended for the crop year, of which two thirds were applied in September and the third part in December; P2: 600 kg ha-1 P2O5, applied at planting and then every two years, and P3: 1,800 kg ha-1 P2O5, the requirement for six years, applied at once at planting), two irrigation regimes (rainfed and year-round irrigation), with three replications. The layers 0-5 and 5-10 cm were sampled to determine microbial biomass carbon (MBC), basal respiration (BR), enzyme activity of acid phosphatase, the oxidizable organic carbon fractions (F1, F2, F3, and F4), and total organic carbon (TOC). The irrigation regimes increased the levels of MBC, microbial activity and acid phosphatase, TOC and oxidizable fractions of soil organic matter under coffee. In general, the form of dividing P had little influence on the soil microbial properties and OC. Only P3 under irrigation increased the levels of MBC and acid phosphatase activity.


2008 ◽  
Vol 40 (9) ◽  
pp. 2076-2078 ◽  
Author(s):  
S. Marinari ◽  
G. Masciandaro ◽  
B. Ceccanti ◽  
S. Grego

2014 ◽  
Vol 40 (3) ◽  
pp. 61-73 ◽  
Author(s):  
Alicja Szwed ◽  
Justyna Bohacz

Abstract The paper addresses the effect of a compost prepared from tobacco wastes with an admixture of bark and straw on the enzymatic activity and certain chemical properties of a grey-brown podzolic soil amended with that compost. The study was conducted under the conditions of a pot experiment in which the soil material was collected from the surface horizon of the grey-brown podzolic soil. The effect of the application of the compost was compared with soil without such amendment. The test plant was maize cv. Kosmo 230. Fertilisation of the light soil with the compost studied caused changes in the enzymatic activity of the soil that were related both to the dose of the compost and to the kind of enzyme studied. With increase in the dose of the compost there was an increase in dehydrogenase activity (highest dose) and a significant decrease in the activity of acid phosphatase. Moreover, it was observed that tobacco compost was a significant source that enriched the light soil in organic matter, total nitrogen, and available forms of phosphorus, magnesium and potassium, which was evident in increased yields of maize grown as the test plant. Significant correlations were also demonstrated between a majority of the biochemical and chemical parameters, which indicates that those parameters characterise well the biological properties of a grey-brown podzolic soil amended with tobacco compost.


2008 ◽  
Vol 54 (No. 8) ◽  
pp. 341-346 ◽  
Author(s):  
Z.J. Shi ◽  
Y. Lu ◽  
Z.G. Xu ◽  
S.L. Fu

Urbanization has drastically changed soil properties, and an assessment of these changes is essential for soil management and soil health. The activities of urease, acid phosphatase, invertase and catalase, soil organic matter, pH, electrical conductivity (EC) and clay (< 0.01 mm) content of urban soils under two land-uses in the central built-up area of the Shenzhen city were investigated, and multivariate analysis was used to study the relationship between soil enzymes and soil physical-chemical properties. The results showed that invertase activity in roadside soil was significantly higher than that in urban park soil, whereas catalase activity was significantly higher in urban park soil. Soil organic matter had significant positive correlation with activities of invertase, urease and acid phosphatase but not with catalase. Soil pH had a significant negative direct effect on urease and acid phosphatase activity, but the effect was counteracted by positive indirect effect of soil organic matter. Soil EC had a positive direct effect on activities of catalase and there was a significant correlation between soil EC and soil catalase activities. Soil organic matter, soil pH and EC were the major factors influencing activities of soil enzymes.


2016 ◽  
Vol 25 (5) ◽  
pp. 618 ◽  
Author(s):  
Kajar Köster ◽  
Frank Berninger ◽  
Jussi Heinonsalo ◽  
Aki Lindén ◽  
Egle Köster ◽  
...  

In boreal forest ecosystems fire, fungi and bacteria, and their interactions, have a pronounced effect on soil carbon dynamics. In this study we measured enzymatic activities, litter decomposition rates, carbon stocks and fungal and microbial biomasses in a boreal subarctic coniferous forest on a four age classes of non-stand replacing fire chronosequence (2, 42, 60 and 152 years after the fire). The results show that microbial activity recovered slowly after fire and the decomposition of new litter was affected by the disturbance. The percent mass loss of Scots pine litter increased with time from the last fire. Slow litter decomposition during the first post-fire years accelerates soil organic matter accumulation that is essential for the recovery of soil biological activities. Fire reduced the enzymatic activity across all the enzyme types measured. Carbon-degrading, chitin-degrading and phosphorus-dissolving enzymes showed different responses with the time elapsed since the fire disturbance. Microbial and enzymatic activity took decades before recovering to the levels observed in old forest stands. Our study demonstrates that slower post-fire litter decomposition has a pronounced impact on the recovery of soil organic matter following forest fires in northern boreal coniferous forests.


1978 ◽  
Vol 58 (2) ◽  
pp. 125-134 ◽  
Author(s):  
S. P. MATHUR ◽  
R. B. SANDERSON

Samples from 17 fields of organic soils (Histosols) were collected on the same day between rows of crops in the summer of 1976 from the environs of Ste. Clothilde, Quebec. Thirty-three properties of the soils were examined for possible correlations. The copper contents of the samples were found to have statistically significant negative correlations with their rates of respiration which were measured as carbon lost as CO2 upon incubation at 21 ± 2 °C. The acid phosphatase enzyme contents in these Histosol samples at each of three different levels of soil biochemical activity were also similarly negatively correlated with their copper concentrations. The above results were confirmed almost without exception by the data obtained by similar analysis of seven samples collected from the same area in the fall of 1976 when the fields were bare. The results supported an earlier suggestion of Mathur and Rayment (1977) that copper application (at a few quintals/ha) be investigated as a means of mitigating the mineralization and subsidence of some organic soils. Apparently, the added Cu may inactivate some of the exocellular soil enzymes which normally contribute to the degradation and mineralization of organic matter.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Mara Regina Moitinho ◽  
Daniel De Bortoli Teixeira ◽  
Elton da Silva Bicalho ◽  
Alan Rodrigo Panosso ◽  
Antonio Sergio Ferraudo ◽  
...  

AbstractThe spatial structure of soil CO2 emission (FCO2) and soil attributes are affected by different factors in a highly complex way. In this context, this study aimed to characterize the spatial variability patterns of FCO2 and soil physical, chemical, and microbiological attributes in a sugarcane field area after reform activities. The study was conducted in an Oxisol with the measurement of FCO2, soil temperature (Ts), and soil moisture (Ms) in a regular 90 × 90-m grid with 100 sampling points. Soil samples were collected at each sampling point at a depth of 0–0.20 m to determine soil physical (density, macroporosity, and microporosity), particle size (sand, silt, and clay), and chemical attributes (soil organic matter, pH, P, K, Ca, Mg, Al, H + Al, cation exchange capacity, and base saturation). Geostatistical analyses were performed to assess the spatial variability and map soil attributes. Two regions (R1 and R2) with contrasting emission values were identified after mapping FCO2. The abundance of bacterial 16S rRNA, pmoA, and nifH genes, determined by real-time quantitative PCR (qPCR), enzymatic activity (dehydrogenase, urease, cellulase, and amylase), and microbial biomass carbon were determined in R1 and R2. The mean values of FCO2 (2.91 µmol m−2 s−1), Ts (22.6 °C), and Ms (16.9%) over the 28-day period were similar to those observed in studies also conducted under Oxisols in sugarcane areas and conventional soil tillage. The spatial pattern of FCO2 was similar to that of macropores, air-filled pore space, silt content, soil organic matter, and soil carbon decay constant. No significant difference was observed between R1 and R2 for the copy number of bacterial 16S rRNA and nifH genes, but the results of qPCR for the pmoA gene presented differences (p < 0.01) between regions. The region R1, with the highest FCO2 (2.9 to 4.2 µmol m−2 s−1), showed higher enzymatic activity of dehydrogenase (33.02 µg TPF g−1 dry soil 24 h−1), urease (41.15 µg NH4–N g−1 dry soil 3 h−1), amylase (73.84 µg glucose g−1 dry soil 24 h−1), and microbial biomass carbon (41.35 µg C g−1 soil) than R2, which had the lowest emission (1.9 to 2.7 µmol m−2 s−1). In addition, the soil C/N ratio was higher in R2 (15.43) than in R1 (12.18). The spatial pattern of FCO2 in R1 and R2 may not be directly related to the total amount of the microbial community (bacterial 16S rRNA) in the soil but to the specific function that these microorganisms play regarding soil carbon degradation (pmoA).


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