Comparing the differential filling of morphospace and allometric space through time: the morphological and developmental dynamics of Early Jurassic ammonoids

Paleobiology ◽  
2011 ◽  
Vol 37 (3) ◽  
pp. 369-382 ◽  
Author(s):  
Sylvain Gerber
Keyword(s):  
Evolutionary Dynamics ◽  
Morphological Evolution ◽  
Taxonomic Diversity ◽  
Early Jurassic ◽  
Adult Size ◽  
Morphological Disparity ◽  
History Of ◽  
Developmental Dynamics ◽  
Shell Geometry ◽  
Average Adult

The evolutionary history of shell geometry of Early Jurassic ammonoids during the Pliensbachian–Toarcian second-order mass extinction is explored at both adult and ontogenetic levels. The ontogenetic approach builds on the concept of allometric space to get insights into the developmental aspects of morphological evolution. Investigation of the deployment of taxa in adult morphospace and allometric space allows the appraisal of the temporal evolution of morphological and allometric disparities. Curves of taxonomic diversity, adult morphological disparity, allometric disparity, and average adult size are contrasted. Results show that during the Pliensbachian–Toarcian interval, ammonoids underwent two successive and drastic declines in taxonomic diversity. Patterns of morphospace and allometric space occupancy suggest nonselective extinction at both morphological and developmental levels. Another measure of allometric disparity suggests the occurrence of two heterochronic trends, a peramorphocline followed by a paedomorphocline, during the Toarcian. These trends are concomitant with changes in average adult size that compensate for the heterochronic effects and explain the striking stability of morphological disparity despite changes in diversity. The results also emphasize the existence of two contrasted evolutionary dynamics in Pliensbachian and Toarcian ammonoids. Methodologically, the allometric disparity approach appears to be a fruitful tool to analyze the rather understudied clade-wide ontogenetic aspects of morphological evolution. Combining multiple approaches to describe clade morphological dynamics leads to a better characterization and understanding of the diversity-disparities relationships and a better distinction of the potential processes driving these macroevolutionary patterns.

Developmental aspects of morphological disparity dynamics: a simple analytical exploration

Paleobiology ◽  
2011 ◽  
Vol 37 (2) ◽  
pp. 237-251 ◽  
Author(s):  
Sylvain Gerber ◽  
Gunther J. Eble ◽  
Pascal Neige
Keyword(s):  
Developmental Changes ◽  
Potential Contribution ◽  
Adult Size ◽  
Morphological Disparity ◽  
Standard Curve ◽  
Evolutionary Changes ◽  
Developmental Dynamics ◽  
Developmental Scheme ◽  
Average Adult

We have devised a simple model for assessing the role of development in shaping the evolution of morphological disparity. Disparity of a clade at any given time is expressed in terms of the developmental dynamics that lead to the variety of adult morphotypes observed. We use assumed phenotypic manifestations of developmental processes, as they could be detected from allometric characterizations, to distinguish a few, nonexclusive types of evolutionary changes in ontogeny. On the basis of this formalization, we describe the diversification of hypothetical clades, using the standard curve of adult morphological disparity, the curve of juvenile disparity, and the curve of allometric disparity, the latter quantifying the diversification of clades in allometric space. Contrasts of these curves reflect the underlying developmental scheme that drives temporal changes in disparity. We then vary the parameters of the model to assess the expected signature of each metric under specific conditions: changes in the relative frequencies of the types of evolutionary developmental changes, changes in the transition magnitude attached to each of them, and effects of temporal variation in average adult size on disparity curves and patterns of morphospace occupation. Results emphasize the potential contribution of these proxies for developmental dynamics—juvenile morphological disparity, allometric disparity, and average adult size—in enriching the interpretation of standard disparity curves and the description of clade histories, with possible process-oriented inferences.

scholarly journals Multifaceted disparity approach reveals dinosaur herbivory flourished before the end-Cretaceous mass extinction

Paleobiology ◽  
2018 ◽  
Vol 44 (4) ◽  
pp. 620-637 ◽  
Author(s):  
Klara K. Nordén ◽  
Thomas L. Stubbs ◽  
Albert Prieto-Márquez ◽  
Michael J. Benton
Keyword(s):  
Early Cretaceous ◽  
Mass Extinction ◽  
Morphological Evolution ◽  
Temporal Patterns ◽  
Taxonomic Diversity ◽  
Ecological Diversity ◽  
Morphological Disparity ◽  
Rapid Extinction

AbstractUnderstanding temporal patterns in biodiversity is an enduring question in paleontology. Compared with studies of taxonomic diversity, long-term perspectives on ecological diversity are rare, particularly in terrestrial systems. Yet ecological diversity is critical for the maintenance of biodiversity, especially during times of major perturbations. Here, we explore the ecological diversity of Cretaceous herbivorous dinosaurs leading up to the K-Pg extinction, using dental and jaw morphological disparity as a proxy. We test the hypothesis that a decline in ecological diversity could have facilitated their rapid extinction 66 Ma. We apply three disparity metrics that together capture different aspects of morphospace occupation and show how this approach is key to understanding patterns of morphological evolution. We find no evidence of declining disparity in herbivorous dinosaurs as a whole—suggesting that dinosaur ecological diversity remained high during the last 10 Myr of their existence. Clades show different disparity trends through the Cretaceous, but none except sauropods exhibits a long-term decline. Herbivorous dinosaurs show two disparity peaks characterized by different processes; in the Early Cretaceous by expansion in morphospace and in the Campanian by morphospace packing. These trends were only revealed by using a combination of disparity metrics, demonstrating how this approach can offer novel insights into macroevolutionary processes underlying patterns of disparity and ecological diversity.

scholarly journals The first 50 Myr of dinosaur evolution: macroevolutionary pattern and morphological disparity

2008 ◽  
Vol 4 (6) ◽  
pp. 733-736 ◽  
Author(s):  
Stephen L Brusatte ◽  
Michael J Benton ◽  
Marcello Ruta ◽  
Graeme T Lloyd
Keyword(s):  
Taxonomic Diversity ◽  
Early Jurassic ◽  
Late Triassic ◽  
Steady Increase ◽  
Morphological Disparity ◽  
Ecological Release ◽  
Driving Mechanisms ◽  
Faunal Abundance ◽  
Evolutionary Radiation ◽  
Dinosaur Evolution

The evolutionary radiation of dinosaurs in the Late Triassic and Early Jurassic was a pivotal event in the Earth's history but is poorly understood, as previous studies have focused on vague driving mechanisms and have not untangled different macroevolutionary components (origination, diversity, abundance and disparity). We calculate the morphological disparity (morphospace occupation) of dinosaurs throughout the Late Triassic and Early Jurassic and present new measures of taxonomic diversity. Crurotarsan archosaurs, the primary dinosaur ‘competitors’, were significantly more disparate than dinosaurs throughout the Triassic, but underwent a devastating extinction at the Triassic–Jurassic boundary. However, dinosaur disparity showed only a slight non-significant increase after this event, arguing against the hypothesis of ecological release-driven morphospace expansion in the Early Jurassic. Instead, the main jump in dinosaur disparity occurred between the Carnian and Norian stages of the Triassic. Conversely, dinosaur diversity shows a steady increase over this time, and measures of diversification and faunal abundance indicate that the Early Jurassic was a key episode in dinosaur evolution. Thus, different aspects of the dinosaur radiation (diversity, disparity and abundance) were decoupled, and the overall macroevolutionary pattern of the first 50 Myr of dinosaur evolution is more complex than often considered.

scholarly journals The Botanical, Chemical and Ethnobotanical Diversity of Southern African Lamiaceae

Molecules ◽  
2021 ◽  
Vol 26 (12) ◽  
pp. 3712
Author(s):  
Ryan D. Rattray ◽  
Ben-Erik Van Wyk
Keyword(s):  
Southern Africa ◽  
Folk Medicine ◽  
Taxonomic Diversity ◽  
Volatile Oils ◽  
Edible Plant ◽  
Flora Of Southern Africa ◽  
Traditional Uses ◽  
History Of ◽  
Pharmaceutical Industries ◽  
History Of Use

The Lamiaceae is undoubtedly an important plant family, having a rich history of use that spans the globe with many species being used in folk medicine and modern industries alike. Their ability to produce aromatic volatile oils has made them valuable sources of materials in the cosmetic, culinary, and pharmaceutical industries. A thorough account of the taxonomic diversity, chemistry and ethnobotany is lacking for southern African Lamiaceae, which feature some of the region’s most notable medicinal and edible plant species. We provide a comprehensive insight into the Lamiaceae flora of southern Africa, comprising 297 species in 42 genera, 105 of which are endemic to the subcontinent. We further explore the medicinal and traditional uses, where all genera with documented uses are covered for the region. A broad review of the chemistry of southern African Lamiaceae is presented, noting that only 101 species (34%) have been investigated chemically (either their volatile oils or phytochemical characterization of secondary metabolites), thus presenting many and varied opportunities for further studies. The main aim of our study was therefore to present an up-to-date account of the botany, chemistry and traditional uses of the family in southern Africa, and to identify obvious knowledge gaps.

scholarly journals Different Within-Host Viral Evolution Dynamics in Severely Immunosuppressed Cases with Persistent SARS-CoV-2

Biomedicines ◽  
2021 ◽  
Vol 9 (7) ◽  
pp. 808
Author(s):  
Laura Pérez-Lago ◽  
Teresa Aldámiz-Echevarría ◽  
Rita García-Martínez ◽  
Leire Pérez-Latorre ◽  
Marta Herranz ◽  
...  
Keyword(s):  
Single Nucleotide Polymorphisms ◽  
Evolutionary Dynamics ◽  
Viral Evolution ◽  
Special Focus ◽  
Nucleotide Polymorphisms ◽  
Single Nucleotide ◽  
New Variant ◽  
History Of ◽  
Evolution Dynamics ◽  
The Uk

A successful Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) variant, B.1.1.7, has recently been reported in the UK, causing global alarm. Most likely, the new variant emerged in a persistently infected patient, justifying a special focus on these cases. Our aim in this study was to explore certain clinical profiles involving severe immunosuppression that may help explain the prolonged persistence of viable viruses. We present three severely immunosuppressed cases (A, B, and C) with a history of lymphoma and prolonged SARS-CoV-2 shedding (2, 4, and 6 months), two of whom finally died. Whole-genome sequencing of 9 and 10 specimens from Cases A and B revealed extensive within-patient acquisition of diversity, 12 and 28 new single nucleotide polymorphisms, respectively, which suggests ongoing SARS-CoV-2 replication. This diversity was not observed for Case C after analysing 5 sequential nasopharyngeal specimens and one plasma specimen, and was only observed in one bronchoaspirate specimen, although viral viability was still considered based on constant low Ct values throughout the disease and recovery of the virus in cell cultures. The acquired viral diversity in Cases A and B followed different dynamics. For Case A, new single nucleotide polymorphisms were quickly fixed (13–15 days) after emerging as minority variants, while for Case B, higher diversity was observed at a slower emergence: fixation pace (1–2 months). Slower SARS-CoV-2 evolutionary pace was observed for Case A following the administration of hyperimmune plasma. This work adds knowledge on SARS-CoV-2 prolonged shedding in severely immunocompromised patients and demonstrates viral viability, noteworthy acquired intra-patient diversity, and different SARS-CoV-2 evolutionary dynamics in persistent cases.

Provenance of Jurassic sedimentary rocks of south-central Quesnellia, British Columbia: implications for paleogeography

2004 ◽  
Vol 41 (1) ◽  
pp. 103-125 ◽  
Author(s):  
Nathan T Petersen ◽  
Paul L Smith ◽  
James K Mortensen ◽  
Robert A Creaser ◽  
Howard W Tipper
Keyword(s):  
Detrital Zircon ◽  
Middle Jurassic ◽  
Sedimentary Rocks ◽  
Source Area ◽  
Lower Jurassic ◽  
Early Jurassic ◽  
Late Triassic ◽  
Nd Isotopes ◽  
South Central ◽  
History Of

Jurassic sedimentary rocks of southern to central Quesnellia record the history of the Quesnellian magmatic arc and reflect increasing continental influence throughout the Jurassic history of the terrane. Standard petrographic point counts, geochemistry, Sm–Nd isotopes and detrital zircon geochronology, were employed to study provenance of rocks obtained from three areas of the terrane. Lower Jurassic sedimentary rocks, classified by inferred proximity to their source areas as proximal or proximal basin are derived from an arc source area. Sandstones of this age are immature. The rocks are geochemically and isotopically primitive. Detrital zircon populations, based on a limited number of analyses, have homogeneous Late Triassic or Early Jurassic ages, reflecting local derivation from Quesnellian arc sources. Middle Jurassic proximal and proximal basin sedimentary rocks show a trend toward more evolved mature sediments and evolved geochemical characteristics. The sandstones show a change to more mature grain components when compared with Lower Jurassic sedimentary rocks. There is a decrease in εNdT values of the sedimentary rocks and Proterozoic detrital zircon grains are present. This change is probably due to a combination of two factors: (1) pre-Middle Jurassic erosion of the Late Triassic – Early Jurassic arc of Quesnellia, making it a less dominant source, and (2) the increase in importance of the eastern parts of Quesnellia and the pericratonic terranes, such as Kootenay Terrane, both with characteristically more evolved isotopic values. Basin shale environments throughout the Jurassic show continental influence that is reflected in the evolved geochemistry and Sm–Nd isotopes of the sedimentary rocks. The data suggest southern Quesnellia received material from the North American continent throughout the Jurassic but that this continental influence was diluted by proximal arc sources in the rocks of proximal derivation. The presence of continent-derived material in the distal sedimentary rocks of this study suggests that southern Quesnellia is comparable to known pericratonic terranes.

Amoeba hugonis n.sp.: Life-history

1952 ◽  
Vol s3-93 (24) ◽  
pp. 427-434
Author(s):  
MONICA TAYLOR
Keyword(s):  
Life History ◽  
New Species ◽  
Nuclear Membrane ◽  
Euglena Gracilis ◽  
Adult Specimen ◽  
History Of ◽  
A New Species ◽  
Average Adult

Material collected in Loch Tannoch was allowed to macerate in a chemical nutrient. A rich crop of Euglena gracilis as well as other infusoria resulted. Eight months later, when the Euglena had encysted, many amoebae were found at the bottom of the receptacle. They constitute a new species, here named Amoeba hugonis. An average adult specimen, when extended, measures about 104x52·2µ. The nucleus consists of a central karyosome lying in the nuclear sap, separated from the cytoplasm by a wellmarked nuclear membrane. Between the latter and the karyosome is situated an achromatic ‘collar’ with chromatin particles embedded in it. Fission is described, but a study of mitosis has been deferred. The life-history of this small amoeba is very similar to that of the large A. proteus, &c. The cycle occupies two months. Chromidia begin to appear in the cytoplasm of the early adult. They give rise to spores, out of which amoebulae hatch.

scholarly journals Stochastic fluctuations drive non-genetic evolution of proliferation in clonal cancer cell populations

2021 ◽  
Author(s):  
Carmen Ortega-Sabater ◽  
Gabriel Fernandez-Calvo ◽  
Víctor M Pérez-García
Keyword(s):  
Evolutionary Dynamics ◽  
Growth Dynamics ◽  
Driver Mutations ◽  
Organizational Changes ◽  
Tumour Heterogeneity ◽  
Stochastic Fluctuations ◽  
Oncological Patients ◽  
Single Genotype ◽  
History Of ◽  
Broad Variety

Evolutionary dynamics allows to understand many changes happening in a broad variety of biological systems, ranging from individuals to complete ecosystems. It is also behind a number of remarkable organizational changes that happen during the natural history of cancers. These reflect tumour heterogeneity, which is present at all cellular levels, including the genome, proteome and phenome, shaping its development and interrelation with its environment. An intriguing observation in different cohorts of oncological patients is that tumours exhibit an increased proliferation as the disease progresses, while the timescales involved are apparently too short for the fixation of sufficient driver mutations to promote an explosive growth. In this paper we discuss how phenotypic plasticity, emerging from a single genotype, may play a key role and provide a ground for a continuous acceleration of the proliferation rate of clonal populations with time. Here we address this question by means of stochastic and deterministic mathematical models that capture proliferation trait heterogeneity in clonal populations and elucidate the contribution of phenotypic transitions on tumour growth dynamics.

scholarly journals Ngwevu intloko: a new early sauropodomorph dinosaur from the Lower Jurassic Elliot Formation of South Africa and comments on cranial ontogeny in Massospondylus carinatus

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7240 ◽  
Author(s):  
Kimberley E.J. Chapelle ◽  
Paul M. Barrett ◽  
Jennifer Botha ◽  
Jonah N. Choiniere
Keyword(s):  
South Africa ◽  
New Species ◽  
Sexual Dimorphism ◽  
New Genus ◽  
Lower Jurassic ◽  
Early Jurassic ◽  
Adult Size ◽  
Minimum Age ◽  
Cranial Ontogeny ◽  
Morphological Differences

Our knowledge of Early Jurassic palaeobiodiversity in the upper Elliot Formation of South Africa has increased markedly in recent years with the discovery of new fossils, re-assessments of previously collected material and a better understanding of Stormberg Group stratigraphy. Here, Ngwevu intloko, a new genus of upper Elliot basal sauropodomorph is named on the basis of a complete skull and partial skeleton (BP/1/4779) previously assigned to Massospondylus carinatus. It can be distinguished from all other basal sauropodomorphs by a combination of 16 cranial and six postcranial characters. The new species is compared to a small ontogenetic series of M. carinatus as well as to a range of closely related taxa. Taphonomic deformation, sexual dimorphism and ontogeny are rejected as possible explanations for the morphological differences present between BP/1/4779 and other taxa. Osteohistological examination reveals that BP/1/4779 had nearly reached adult size at the time of its death at a minimum age of 10 years.

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