Configuration Dependence of the Vibrational Free Energy in Substitutional Alloys and Its Effects on Phase Stability

1995 ◽  
Vol 408 ◽  
Author(s):  
G. D. Garbulsky ◽  
G. Ceder

AbstractThe lattice vibrations influence the ordering tendencies in substitutional alloys through the configurational dependence of the vibrational free energy. In this paper we study the size of this effect and the trends with chemical affinity and size mismatch. By analyzing available experimental information and by studying simple model systems for which the phonon frequencies can be easily computed, we find that a) changes in transition temperatures of order-disorder transformations of 30% due to the lattice vibrations may not be uncommon; b) the transition temperatures are usually lowered when the vibrations are included in the modeling of the system, except for certain combinations of size mismatch and chemical affinity; and c) that the largest contribution to the configurational dependence of the vibrational free energy is due to the intermediate and high frequencies of the spectrum.

1930 ◽  
Vol 3 (4) ◽  
pp. 631-639
Author(s):  
John T. Blake

Abstract WHEN a chemical reaction takes place, it is usually accompanied by an absorption or evolution of heat. The amount of the heat interchange is not a direct measure of the chemical affinity involved in the reaction, nor is it a measure of the free energy of the reaction. The heat of reaction, however, is a measure of the total change in internal energy and is of importance, therefore, in calculating the effect of temperature on a reaction and in elucidating the mechanism of it.


2020 ◽  
Vol 102 (10) ◽  
Author(s):  
Thomas D. Swinburne ◽  
Jan Janssen ◽  
Mira Todorova ◽  
Gideon Simpson ◽  
Petr Plechac ◽  
...  

2005 ◽  
Vol 3 (6) ◽  
pp. 125-138 ◽  
Author(s):  
Rhoda J Hawkins ◽  
Tom C.B McLeish

Alpha helical coiled-coils appear in many important allosteric proteins such as the dynein molecular motor and bacteria chemotaxis transmembrane receptors. As a mechanism for transmitting the information of ligand binding to a distant site across an allosteric protein, an alternative to conformational change in the mean static structure is an induced change in the pattern of the internal dynamics of the protein. We explore how ligand binding may change the intramolecular vibrational free energy of a coiled-coil, using parameterized coarse-grained models, treating the case of dynein in detail. The models predict that coupling of slide, bend and twist modes of the coiled-coil transmits an allosteric free energy of ∼2 k B T , consistent with experimental results. A further prediction is a quantitative increase in the effective stiffness of the coiled-coil without any change in inherent flexibility of the individual helices. The model provides a possible and experimentally testable mechanism for transmission of information through the alpha helical coiled-coil of dynein.


2019 ◽  
Vol 61 (12) ◽  
pp. 2432
Author(s):  
В.А. Постников ◽  
А.А. Кулишов ◽  
А.А. Островская ◽  
А.С. Степко ◽  
П.В. Лебедев-Степанов

An analysis of the change in the Gibbs free energy ∆G upon the formation of a flat nucleus of a p-terphenyl crystal at the liquid – air interface is presented, taking into account the anisotropy of the surface energy of the faces. The surface energy values of the p-terphenyl crystal faces were calculated by the atomic force field method OPLS, based on structural data. Experimental information on crystal growth from solutions and their surface properties was used to analyze the model.


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