scholarly journals Species Limits and Clinal Variation in a Widespread High Andean Furnariid: The Buff-breasted Earthcreeper (Upucerthia validirostris)

The Condor ◽  
2013 ◽  
Vol 115 (1) ◽  
pp. 131-142 ◽  
Author(s):  
Juan I. Areta ◽  
Mark Pearman
Keyword(s):  
Clinal Variation ◽  
Species Limits

scholarly journals Clinal Variation in Vocalizations of an Antbird (Thamnophilidae) and Implications for Defining Species Limits

The Auk ◽  
2005 ◽  
Vol 122 (2) ◽  
pp. 433-444 ◽  
Author(s):  
Morton L. Isler ◽  
Phyllis R. Isler ◽  
Robb T. Brumfield
Keyword(s):  
Genetic Variation ◽  
Quantitative Study ◽  
Molecular Study ◽  
Biological Species ◽  
Clinal Variation ◽  
Geographic Pattern ◽  
Species Status ◽  
Species Limits

Abstract In avian taxa in which vocalizations are considered innate, such as suboscine passerines, vocal characters are increasingly being used to help determine whether populations have achieved species status. In comparing vocal characteristics of distant populations, however, one must be concerned with the possibility of character gradation through intermediate populations. The first quantitative study of a species in a suboscine family to test for clinal vocal variation, our vocal study found clinal variation in the pace (number of notes per second) of male loudsongs, and revealed that the geographic pattern of the clines was consistent with genetic variation found in the companion molecular study (Brumfield 2005). The result underscores the necessity of searching for intermediacy when analyzing vocalizations of geographically distant populations. Furthermore, given that male loudsong pace was the only vocal character that varied across the intergrading populations, the result also provides support to the guideline that one should expect thamnophilid species to differ in at least three vocal characters (Isler et al. 1998) and indicates that this degree of vocal character differences can be a valuable “yard stick” in determining which thamnophilid populations have achieved biological species status.

CLINAL VARIATION IN VOCALIZATIONS OF AN ANTBIRD (THAMNOPHILIDAE) AND IMPLICATIONS FOR DEFINING SPECIES LIMITS

The Auk ◽  
2005 ◽  
Vol 122 (2) ◽  
pp. 433 ◽  
Author(s):  
Morton L. Isler ◽  
Phyllis R. Isler ◽  
Robb T. Brumfield
Keyword(s):  
Clinal Variation ◽  
Species Limits

Joseph Sidebotham: vicissitudes of a Victorian collector

2015 ◽  
Vol 42 (2) ◽  
pp. 197-210 ◽  
Author(s):  
Laurence M. Cook
Keyword(s):  
Natural History ◽  
Species Limits ◽  
Clear Cut ◽  
Natural History Collections ◽  
As Species ◽  
Scientific World

Joseph Sidebotham (1824–1885) was a Manchester cotton baron whose natural history collections are now in the Manchester Museum. In addition to collecting he suggested a method for identifying and classifying Lepidoptera and investigated variation within species as well as species limits. With three close collaborators, he is credited with discovering many species new to Britain in both Lepidoptera and Coleoptera. A suspicion of fraud attaches to these claims. The evidence is not clear-cut in the Lepidoptera, but a possible reason is suggested why Sidebotham, as an amateur in the increasingly professional scientific world, might have engaged in deceit.

Differences between recent and historical records of upper species limits in the northern European Alps

Erdkunde ◽  
2013 ◽  
Vol 67 (4) ◽  
pp. 345-354
Author(s):  
Sebastian Schmidtlein ◽  
Ulrike Faude ◽  
Ole Rössler ◽  
Hannes Feilhauer ◽  
Jörg Ewald ◽  
...  
Keyword(s):  
European Alps ◽  
Historical Records ◽  
Species Limits ◽  
Northern European

Segregation and speciation in the Neogene planktonic foraminiferal clade Globoconella

Paleobiology ◽  
1999 ◽  
Vol 25 (3) ◽  
pp. 383-395 ◽  
Author(s):  
Cynthia E. Schneider ◽  
James P. Kennett
Keyword(s):  
Morphological Evolution ◽  
Evolutionary Divergence ◽  
Clinal Variation ◽  
Near Surface ◽  
Surface Warming ◽  
Isotopic Analyses ◽  
Oxygen Isotopic ◽  
Morphological Differences ◽  
Middle Pliocene ◽  
Water Depths

The origin of the Neogene planktonic foraminifer Globorotalia (Globoconella) pliozea in the subtropical southwest Pacific has been attributed to its isolation resulting from intensification of the Subtropical Divergence (Tasman Front). Oxygen isotopic analyses suggest that, although the Subtropical Divergence may have played a role, the evolution of Gr. (G.) pliozea was facilitated by depth segregation of Gr. (G.) conomiozea morphotypes (low and high conical) during an interval of near-surface warming and increasing thermal gradient. Oxygen isotopic analyses suggest that low conical morphotypes of Gr. (G.) conomiozea inhabited greater depths than high conical morphotypes. Low conical forms of Gr. (G.) conomiozea are considered ancestral to the low conical species, Gr. (G.) pliozea. Oxygen isotopes indicate that Gr. (G.) pliozea inhabited greater depths than its ancestor, Gr. (G.) conomiozea.These data are consistent with depth-parapatric and depth-allopatric models, but not with a sympatric model of speciation. In the allopatric model, reproduction at different water depths acts as a barrier between morphotypes. In the parapatric model, clinal variation along a depth gradient acts as a barrier between morphotypes living at the limits of the gradient. Depth segregation in both models results in genetic isolation and evolutionary divergence. Our data support a correlation between morphological evolution and habitat changes in the Globoconella clade, implying separation of populations as a driving force for morphological evolution.Ecological segregation of morphotypes and species may be related to morphology (height of the conical angle), based on the data from Gr. (G.) conomiozea and Gr. (G.) pliozea. However, morphological differences alone do not necessarily produce depth differences. Large morphological differences between Gr. (G.) pliozea and closely related Gr. (G.) puncticulata did not result in isotopic and therefore depth differences between these species. These species coexisted at the same water depths for nearly 1 m.y. Thus, it is unlikely that the extinction of Gr. (G.) pliozea in the middle Pliocene resulted from competition with Gr. (G.) puncticulata, as previously suggested.

Genotypic Variation in C and N Isotope Discrimination Suggests Local Adaptation of Heart-Leaved Willow

2021 ◽  
Author(s):  
Yi Hu ◽  
Robert D Guy ◽  
Raju Y Soolanayakanahally
Keyword(s):  
Isotopic Composition ◽  
Local Adaptation ◽  
N Uptake ◽  
Genotypic Variation ◽  
Carbon Isotopic Composition ◽  
Genotypic Differences ◽  
Clinal Variation ◽  
Trade Off ◽  
Uptake Efficiency ◽  
N Uptake Efficiency

Abstract Plants acquire multiple resources from the environment and may need to adjust and/or balance their respective resource-use efficiencies to maximize grow and survival, in a locally adaptive manner. In this study, tissue and whole-plant carbon isotopic composition (δ13C) and C/N ratios provided long-term measures of use efficiencies for water (WUE) and nitrogen (NUE), and a nitrogen isotopic composition (δ15N) based mass balance model was used to estimate traits related to N uptake and assimilation in heart-leaved willow (Salix eriocephala Michx.). In an initial common garden experiment consisting of 34 populations, we found population level variation in δ13C, C/N and δ15N, indicating different patterns in WUE, NUE and N uptake and assimilation. Although there was no relationship between foliar δ13C and C/N ratios among populations, there was a significant negative correlation between these measures across all individuals, implying a genetic and/or plastic trade-off between WUE and NUE not associated with local adaptation. To eliminate any environmental effect, we grew a subset of 21 genotypes hydroponically with nitrate as the sole N-source, and detected significant variation in δ13C, δ15N and C/N ratios. Variation in δ15N was mainly due to genotypic differences in the nitrate efflux/influx ratio (E/I) at the root. Both experiments suggested clinal variation in δ15N (and thus N uptake efficiency) with latitude of origin, which may relate to water availability and could contribute to global patterns in ecosystem δ15N. There was a tendency for genotypes with higher WUE to come from more water replete sites with shorter and cooler growing seasons. We found that δ13C, C/N, and E/I were not inter-correlated, suggesting that selection of growth, WUE, NUE and N uptake efficiency can occur without trade-off.

scholarly journals Evidence for Selection at the fused1 Locus of Drosophila americana

Genetics ◽  
2001 ◽  
Vol 158 (1) ◽  
pp. 279-290 ◽  
Author(s):  
Jorge Vieira ◽  
Bryant F McAllister ◽  
Brian Charlesworth
Keyword(s):  
Amino Acid ◽  
Sequence Variation ◽  
Amino Acid Replacement ◽  
Population Subdivision ◽  
Amino Acid Substitutions ◽  
Clinal Variation ◽  
Haplotype Structure ◽  
Common Amino Acid ◽  
Chromosome Arrangement ◽  
Dna Sequence Variation

Abstract We analyze genetic variation at fused1, a locus that is close to the centromere of the X chromosome-autosome (X/4) fusion in Drosophila americana. In contrast to other X-linked and autosomal genes, for which a lack of population subdivision in D. americana has been observed at the DNA level, we find strong haplotype structure associated with the alternative chromosomal arrangements. There are several derived fixed differences at fused1 (including one amino acid replacement) between two haplotype classes of this locus. From these results, we obtain an estimate of an age of ∼0.61 million years for the origin of the two haplotypes of the fused1 gene. Haplotypes associated with the X/4 fusion have less DNA sequence variation at fused1 than haplotypes associated with the ancestral chromosome arrangement. The X/4 haplotypes also exhibit clinal variation for the allele frequencies of the three most common amino acid replacement polymorphisms, but not for adjacent silent polymorphisms. These patterns of variation are best explained as a result of selection acting on amino acid substitutions, with geographic variation in selection pressures.

scholarly journals Morphology, vocalizations, and mitochondrial DNA suggest that the Graceful Prinia is two species

The Auk ◽  
2021 ◽  
Author(s):  
Per Alström ◽  
Pamela C Rasmussen ◽  
Canwei Xia ◽  
Lijun Zhang ◽  
Chengyi Liu ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Arabian Peninsula ◽  
Morphological Characters ◽  
Sensu Stricto ◽  
Species Limits ◽  
Mosaic Pattern ◽  
Coalescence Time ◽  
New Subspecies ◽  
Taxonomic Analysis ◽  
Potential Contact

Abstract Prinias (Cisticolidae: Prinia) are resident warblers of open areas across Africa and Asia and include many polytypic species whose species limits have not been seriously reevaluated recently. Based on an integrative taxonomic analysis of morphology, song, and mitochondrial DNA (mtDNA), we suggest that 2 species should be recognized in the Graceful Prinia (Prinia gracilis) complex. In addition, our morphological analyses show the existence of a well-marked undescribed form in southeastern Somalia, which we name herein as a new subspecies. Prinia gracilis is a small, drab, long-tailed species with streaking above and plain pale underparts that has been suggested to fall into 2 groups: the southwestern nominate group (from Egypt to Oman) and the northeastern lepida group (from Turkey through India). However, the characters presented to justify this grouping are variable and show a mosaic pattern, and whether genetic and vocal differences exist is unknown. We found consistent between-group song differences, with the nominate group giving consistently longer inter-phrase intervals, whereas the members of the lepida group sing an essentially continuous reel. An mtDNA tree suggests a deep split between the nominate and lepida groups, with a coalescence time between these clades of ~ 2.2 million years ago. Vocal and mtDNA analyses provided evidence that the northeastern Arabian Peninsula taxon carpenteri belongs to the lepida group. We found that, of all the morphological characters proposed, only proportions and tail barring and spotting relatively consistently distinguish the 2 groups. However, these characters strongly suggest that the eastern Arabian Peninsula is populated by taxa of both the gracilis and lepida groups, in different areas, but we lack genetic and bioacoustic data to corroborate this. Although further study is needed in potential contact zones, we suggest that 2 species should be recognized in the P. gracilis complex, and we propose the retention of the English name Graceful Prinia for P. gracilis sensu stricto, while we suggest that P. lepida be known as Delicate Prinia.

Performance of a points-based scoring system for assessing species limits in birds

The Auk ◽  
2021 ◽  
Author(s):  
Joseph A Tobias ◽  
Paul F Donald ◽  
Rob W Martin ◽  
Stuart H M Butchart ◽  
Nigel J Collar
Keyword(s):  
Strong Support ◽  
Molecular Data ◽  
Sympatric Species ◽  
Global Scale ◽  
Training Set ◽  
Species Limits ◽  
Phenotypic Data ◽  
Fast Tracking ◽  
Extinction Rates ◽  
Phenotypic Divergence

AbstractSpecies are fundamental to biology, conservation, and environmental legislation; yet, there is often disagreement on how and where species limits should be drawn. Even sophisticated molecular methods have limitations, particularly in the context of geographically isolated lineages or inadequate sampling of loci. With extinction rates rising, methods are needed to assess species limits rapidly but robustly. Tobias et al. devised a points-based system to compare phenotypic divergence between taxa against the level of divergence in sympatric species, establishing a threshold to guide taxonomic assessments at a global scale. The method has received a mixed reception. To evaluate its performance, we identified 397 novel taxonomic splits from 328 parent taxa made by application of the criteria (in 2014‒2016) and searched for subsequent publications investigating the same taxa with molecular and/or phenotypic data. Only 71 (18%) novel splits from 60 parent taxa have since been investigated by independent studies, suggesting that publication of splits underpinned by the criteria in 2014–2016 accelerated taxonomic decisions by at least 33 years. In the evaluated cases, independent analyses explicitly or implicitly supported species status in 62 (87.3%) of 71 splits, with the level of support increasing to 97.2% when excluding subsequent studies limited only to molecular data, and reaching 100% when the points-based criteria were applied using recommended sample sizes. Despite the fact that the training set used to calibrate the criteria was heavily weighted toward passerines, splits of passerines and non-passerines received equally strong support from independent research. We conclude that the method provides a useful tool for quantifying phenotypic divergence and fast-tracking robust taxonomic decisions at a global scale.

scholarly journals GENETIC DIFFERENTIATION BETWEEN GEOGRAPHICALLY DISTANT POPULATIONS OF DROSOPHILA MELANOGASTER

Genetics ◽  
1982 ◽  
Vol 101 (2) ◽  
pp. 235-256
Author(s):  
Rama S Singh ◽  
Donal A Hickey ◽  
Jean David
Keyword(s):  
Drosophila Melanogaster ◽  
Genetic Differentiation ◽  
Gene Frequency ◽  
Natural Populations ◽  
Allozyme Variation ◽  
Clinal Variation ◽  
Significant Genetic Differentiation ◽  
African Populations ◽  
Latitudinal Clines ◽  
North And South

ABSTRACT We have studied allozyme variation at 26 gene loci in nine populations of Drosophila melanogaster originating on five different continents. The distant populations show significant genetic differentiation. However, only half of the loci studied have contributed to this differentiation; the other half show identical patterns in all populations. The genetic differentiation in North American, European and African populations is correlated with the major climatic differences between north and south. These differences arise mainly from seven loci that show gene-frequency patterns suggestive of latitudinal clines in allele frequencies. The clinal variation is such that subtropical populations are more heterozygous than temperate populations. These results are discussed in relation to the selectionist and neutralist hypotheses of genetic variation in natural populations.

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