Population Genetic Analysis among Five Indian Population Groups Using Six Microsatellite Markers

Human Biology ◽  
2003 ◽  
Vol 75 (2) ◽  
pp. 189-203 ◽  
Author(s):  
Anu Ghosh ◽  
Birajalaxmi Das ◽  
M Seshadri
Keyword(s):  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Indian Population ◽  
Population Genetic Analysis ◽  
Population Groups

Rhodnius pallescens microsatellite markers for population genetic analysis in Rhodnius ecuadoriensis: preliminary assessment

2019 ◽  
Vol 40 (2) ◽  
Author(s):  
Mario J. Grijalva
Keyword(s):  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Preliminary Assessment ◽  
Population Genetic Analysis ◽  
Rhodnius Ecuadoriensis ◽  
Rhodnius Pallescens

Rhodnius ecuadoriensis Lent & León (Hemiptera: Reduviidae) es el prinicipal vector de    la enfermedad de Chagas en Ecuador, donde la estructura genética de sus poblaciones es poco conocida. Nosotros probamos seis Repeticiones Cortas en Tamdem (RCT) de R. pallescens Barber en poblaciones selváticas y domésticas de R. ecuadoriensis. Dos microsatelites fueron monomórficos, dos dieron resultados ambiguos y dos fueron polimórficos (16 y 19 alelos) y fueron utilizados para análisis. Los resultados de las frecuencias alélicas, AMOVA y los pruebas Bayesianas para genética favorecen la teorí­a de la existencia de una sola población. Estos resultados preliminares sugieren que las poblaciones selváticas y domésticas d R. ecuadoriensis intercambian frecuentemente migrantes. Por consiguiente el control de la Enfermedad de Chagas requiere vigilancia entomológica continua en la costa del Ecuador.

scholarly journals Development of microsatellite markers for the house cricket, Acheta domesticus (Orthoptera: Gryllidae)

2020 ◽  
Vol 21 (9) ◽  
Author(s):  
Yash Munnalal Gupta ◽  
SUPATCHAREE TANASARNPAIBOON ◽  
KITTISAK BUDDHACHAT ◽  
SURIN PEYACHOKNAGUL ◽  
PHATTHARAPORN INTHIM ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Acheta Domesticus ◽  
House Cricket ◽  
Population Genetic Analysis ◽  
Closely Related Species ◽  
Genetic Studies ◽  
Future Population

Abstract. Gupta YM, Tanasarnpaiboon S, Buddhachat K, Peyachoknagul S, Inthim P, Homchan S. 2020. Development of microsatellite markers for the house cricket, Acheta domesticus (Orthoptera: Gryllidae). Biodiversitas 21: 4094-4099. The house cricket, Acheta domesticus, is one of the species of crickets commonly found in Thailand. Insect breeders in Thailand prefer to breed house cricket as food due to its better taste and popularity among local people. Moreover, largescale breeding industries also breed house cricket to produce cricket-based edible products. Insect breeding industry is growing rapidly and requires primary precaution for sustainable production. To facilitate breeding system to maintain genetic variation in the captive population, we have sequenced the whole genome of A. domesticus to search for simple sequence repeats (SSRs) in order to develop polymorphic microsatellite markers for preliminary population genetic analysis. A total of 112,157 SSRs with primer pairs were identified in our analysis.  Of these, 91 were randomly selected to check for amplification of microsatellite polymorphisms. From these, nine microsatellites were used to check genetic variation in forty-five individuals of A. domesticus from the Phitsanulok population (Thailand).  These microsatellite markers also showed cross-amplification with other three species of edible crickets, specifically Gryllus bimaculatus, Gryllus testaceus, and Brachytrupes portentosus. The microsatellite markers presented herein will facilitate future population genetic analysis of A. domesticus populations. Moreover, the transferability of these makers would also enable researchers to conduct genetic studies for other closely related species.

Ten polymorphic microsatellite markers characterized for Schizothorax pseudaksaiensis and applied for population genetic analysis

2016 ◽  
Vol 95 (S1) ◽  
pp. 5-8
Author(s):  
MING MING BAO ◽  
QIONG ZHOU ◽  
CONG XIN XIE ◽  
LIN GANG CAI ◽  
JIAN GONG NIU ◽  
...  
Keyword(s):  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Population Genetic Analysis ◽  
Polymorphic Microsatellite

scholarly journals Population genetic analysis of Theileria parva isolated in cattle and buffaloes in Tanzania using minisatellite and microsatellite markers

2016 ◽  
Vol 224 ◽  
pp. 20-26 ◽  
Author(s):  
Elpidius Rukambile ◽  
Eunice Machuka ◽  
Moses Njahira ◽  
Martina Kyalo ◽  
Robert Skilton ◽  
...  
Keyword(s):  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Theileria Parva ◽  
Population Genetic Analysis

scholarly journals Comparative Performance of Single Nucleotide Polymorphism and Microsatellite Markers for Population Genetic Analysis

2009 ◽  
Vol 100 (5) ◽  
pp. 556-564 ◽  
Author(s):  
Brad S. Coates ◽  
Douglas V. Sumerford ◽  
Nicholas J. Miller ◽  
Kyung S. Kim ◽  
Thomas W. Sappington ◽  
...  
Keyword(s):  
Single Nucleotide Polymorphism ◽  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Nucleotide Polymorphism ◽  
Population Genetic Analysis ◽  
Comparative Performance ◽  
Single Nucleotide

scholarly journals Population genetic analysis of a global collection of Fragaria vesca using microsatellite markers

PLoS ONE ◽  
2017 ◽  
Vol 12 (8) ◽  
pp. e0183384 ◽  
Author(s):  
Hrannar Smári Hilmarsson ◽  
Timo Hytönen ◽  
Sachiko Isobe ◽  
Magnus Göransson ◽  
Tuomas Toivainen ◽  
...  
Keyword(s):  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Population Genetic ◽  
Fragaria Vesca ◽  
Population Genetic Analysis

scholarly journals Study of microsatellite cross-species specificity in freshwater sponge families Lubomirskiidae and Spongillidae

2020 ◽  
pp. 1084-1089
Author(s):  
A.S. Yakhnenko ◽  
◽  
◽  
V.B. Itskovich ◽  
Keyword(s):  
Genetic Analysis ◽  
Microsatellite Markers ◽  
Related Species ◽  
Population Genetic ◽  
Genomic Data ◽  
Species Specificity ◽  
Careful Study ◽  
Freshwater Sponge ◽  
Population Genetic Analysis ◽  
Closely Related Species

Abstract. The endemic Baikal sponges of the Lubomirskiidae family are a unique bouquet of closely related species formed from a common ancestor with the present-day cosmopolitans, Ephydatia muelleri, facing today are big ecological problems that require careful study. It is necessary to analyze the genetic structure of endemic freshwater sponge populations for a better understanding of the influence of such adaptive features on permanent habitat conditions as the loss of the ability to form gemmules. Microsatellite markers are best suited for analyzing population structure. The closest species to them, for which microsatellite markers have been developed to date, is Ephydatia fluviatilis. In this article, we check the suitability of these markers for population genetic analysis of Lubomirskia baikalensis and E.muelleri species using bioinformatic and molecular genetic methods of analysis, since the cross-species specificity of microsatellite markers has been shown for many closely related species. Despite the revealed 45.5% cross-species specificity for both L.baikalensis and E.muelleri at the level of genomic data, qualitative population genetic analysis requires the development of specific microsatellite markers de novo based on the genomic data of L.baikalensis and E.muelleri.

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