The Classification of Twenty Common Amino Acid Residues in Protected Peptides by Theirβ-Sheet-Structure-Stabilizing Potentials, SPβ, and Its Application to Peptide Synthesis

1993 ◽  
Vol 66 (2) ◽  
pp. 483-488 ◽  
Author(s):  
Mitsuaki Narita ◽  
Jin-Shik Lee ◽  
Yuka Murakawa ◽  
Yoshihisa Kojima
Keyword(s):  
Amino Acid ◽  
Peptide Synthesis ◽  
Amino Acid Residues ◽  
Common Amino Acid ◽  
Sheet Structure ◽  
Protected Peptides

scholarly journals Individuality of Amino Acid Residues in Protected Peptides. Conformational and β-Sheet Structure-Disrupted Behaviors of Resin-Bound Peptides

1989 ◽  
Vol 62 (3) ◽  
pp. 773-779 ◽  
Author(s):  
Mitsuaki Narita ◽  
Shizuko Isokawa ◽  
Shinya Honda ◽  
Hiroshi Umeyama ◽  
Hideaki Kakei ◽  
...  
Keyword(s):  
Amino Acid ◽  
Amino Acid Residues ◽  
Sheet Structure ◽  
Β Sheet ◽  
Protected Peptides

Two-dimensional classification of amphiphilic monomers based on interfacial and partitioning properties. 2. Amino acids and amino acid residues

2006 ◽  
Vol 284 (6) ◽  
pp. 575-585 ◽  
Author(s):  
Ivan M. Okhapkin ◽  
Andrei A. Askadskii ◽  
Vladimir A. Markov ◽  
Elena E. Makhaeva ◽  
Alexei R. Khokhlov
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Two Dimensional ◽  
Amino Acid Residues ◽  
Dimensional Classification

scholarly journals Towards a classification of glycosyltransferases based on amino acid sequence similarities: prokaryotic α-mannosyltransferases

1996 ◽  
Vol 318 (1) ◽  
pp. 133-138 ◽  
Author(s):  
Roberto A GEREMIA ◽  
E Alejandro PETRONI ◽  
Luis IELPI ◽  
Bernard HENRISSAT
Keyword(s):  
Amino Acid ◽  
Sequence Similarity ◽  
Amino Acid Residues ◽  
Glycosyl Hydrolases ◽  
Hydrophobic Cluster Analysis ◽  
Alignment Algorithms ◽  
Automatic Alignment ◽  
Genes Encoding ◽  
Sequence Similarities

A number of genes encoding bacterial glycosyltransferases have been sequenced during the last few years, but their low sequence similarity has prevented a straightforward grouping of these enzymes into families. The sequences of several bacterial α-mannosyltransferases have been compared using current alignment algorithms as well as hydrophobic cluster analysis (HCA). These sequences show a similarity which is significant but too low to be reliably aligned using automatic alignment methods. However, a region spanning approx. 270 residues in these proteins could be aligned by HCA, and several invariant amino acid residues were identified. These features were also found in several other glycosyltransferases, as well as in proteins of unknown function present in sequence databases. This similarity most probably reflects the existence of a family of proteins with conserved structural and mechanistic features. It is argued that the present IUBMB classification of glycosyltransferases could be complemented by a classification of these enzymes based on sequence similarities analogous to that which we proposed for glycosyl hydrolases [Henrissat, B. (1991) Biochem. J. 280, 309–316].

Classification of Bacteria Based on the Biases of Terminal Amino Acid Residues

2011 ◽  
Vol 30 (4) ◽  
pp. 290-297
Author(s):  
Michio Asada ◽  
Hideki Hirakawa ◽  
Satoru Kuhara
Keyword(s):  
Amino Acid ◽  
Amino Acid Residues ◽  
Terminal Amino Acid ◽  
Terminal Amino

scholarly journals Microwave-assisted solid-phase peptide synthesis of neurosecretory protein GL composed of 80 amino acid residues

2015 ◽  
Vol 21 (6) ◽  
pp. 454-460 ◽  
Author(s):  
Keiko Masuda ◽  
Haruka Ooyama ◽  
Kenshiro Shikano ◽  
Kunihiro Kondo ◽  
Megumi Furumitsu ◽  
...  
Keyword(s):  
Amino Acid ◽  
Peptide Synthesis ◽  
Solid Phase ◽  
Solid Phase Peptide Synthesis ◽  
Amino Acid Residues ◽  
Microwave Assisted
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