Crystal Structure of Adenine-1-(2-Carboxyethyl)uracil (1 : 1) Complex. A Model for Interactions of Amino Acid Side Chains with Nucleic Acid Base Pair

Shigeo Fujita; Akio Takenaka; Yoshio Sasada

doi:10.1246/bcsj.56.2234

Crystal Structure of Adenine-1-(2-Carboxyethyl)uracil (1 : 1) Complex. A Model for Interactions of Amino Acid Side Chains with Nucleic Acid Base Pair

Bulletin of the Chemical Society of Japan ◽

10.1246/bcsj.56.2234 ◽

1983 ◽

Vol 56 (8) ◽

pp. 2234-2237 ◽

Cited By ~ 8

Author(s):

Shigeo Fujita ◽

Akio Takenaka ◽

Yoshio Sasada

Keyword(s):

Crystal Structure ◽

Amino Acid ◽

Nucleic Acid ◽

Base Pair ◽

Side Chains ◽

Acid Base ◽

Amino Acid Side Chains ◽

Nucleic Acid Base

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ChemInform Abstract: Synthesis and X-Ray Crystal Structure of a Novel Tetrathiafulvalene Dimethyl(2,4-dioxo(1H,3H)pyrimido)tetrathiafulvalene, Able to Form Intermolecular Hydrogen Bonds of Nucleic Acid Base-Pair Type.

ChemInform ◽

10.1002/chin.199527161 ◽

2010 ◽

Vol 26 (27) ◽

pp. no-no

Author(s):

O. NEILANDS ◽

S. BELYAKOV ◽

V. TILIKA ◽

A. EDZINA

Keyword(s):

Crystal Structure ◽

Nucleic Acid ◽

Hydrogen Bonds ◽

Base Pair ◽

Pair Type ◽

Acid Base ◽

Intermolecular Hydrogen Bonds ◽

X Ray ◽

Nucleic Acid Base

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Synthesis and X-ray crystal structure of a novel tetrathiafulvalene dimethyl[2,4-dioxo(1H,3H)pyrimido]tetrathiafulvalene, able to form intermolecular hydrogen bonds of nucleic acid base-pair type

Journal of the Chemical Society Chemical Communications ◽

10.1039/c39950000325 ◽

1995 ◽

pp. 325-326 ◽

Cited By ~ 38

Author(s):

Ojars Neilands ◽

Sergey Belyakov ◽

Vija Tilika ◽

Alma Edžina

Keyword(s):

Crystal Structure ◽

Nucleic Acid ◽

Hydrogen Bonds ◽

Base Pair ◽

Pair Type ◽

Acid Base ◽

Intermolecular Hydrogen Bonds ◽

X Ray ◽

Nucleic Acid Base

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Crystal structure of (uracil-1-ylethyl)(adenin-9-ylethyl)tryptophan dipeptide: An interaction model between nucleic acid base and aromatic amino acid.

Chemical and Pharmaceutical Bulletin ◽

10.1248/cpb.35.1691 ◽

1987 ◽

Vol 35 (5) ◽

pp. 1691-1701 ◽

Cited By ~ 5

Author(s):

TOSHIMASA ISHIDA ◽

YOSHIKO TOKURA ◽

MARI SHIMAMOTO ◽

MITSUNOBU DOI ◽

MASATOSHI INOUE

Keyword(s):

Crystal Structure ◽

Amino Acid ◽

Nucleic Acid ◽

Aromatic Amino Acid ◽

Interaction Model ◽

Acid Base ◽

Nucleic Acid Base

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Model for interactions of amino acid side chains with Watson-Crick base pair of guanine and cytosine: crystal structure of 9-(2-carbamoylethyl)guanine and 1-methylcytosine complex

Biochemistry ◽

10.1021/bi00323a039 ◽

1985 ◽

Vol 24 (2) ◽

pp. 508-512 ◽

Cited By ~ 6

Author(s):

Shigeo Fujita ◽

Akio Takenaka ◽

Yoshio Sasada

Keyword(s):

Crystal Structure ◽

Amino Acid ◽

Base Pair ◽

Side Chains ◽

Amino Acid Side Chains

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A standard reference frame for the description of nucleic acid base-pair geometry 1 1Edited by P. E. Wright 2 2This is a document of the Nomenclature Committee of IUBMB (NC-IUBMB)/IUPAC-IUBMB Joint Commission on Biochemical Nomenclature (JCBN), whose members are R. Cammack (chairman), A. Bairoch, H.M. Berman, S. Boyce, C.R. Cantor, K. Elliott, D. Horton, M. Kanehisa, A. Kotyk, G.P. Moss, N. Sharon and K.F. Tipton.

Journal of Molecular Biology ◽

10.1006/jmbi.2001.4987 ◽

2001 ◽

Vol 313 (1) ◽

pp. 229-237 ◽

Cited By ~ 371

Author(s):

Wilma K Olson ◽

Manju Bansal ◽

Stephen K Burley ◽

Richard E Dickerson ◽

Mark Gerstein ◽

...

Keyword(s):

Nucleic Acid ◽

Reference Frame ◽

Base Pair ◽

Joint Commission ◽

Acid Base ◽

Nomenclature Committee ◽

Biochemical Nomenclature ◽

Nucleic Acid Base

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Flexibly capped β-cyclodextrins by the hydrogen-bonded nucleic acid base pair. The pH-control of binding ability by an on-off-switched capping

Tetrahedron Letters ◽

10.1016/s0040-4039(00)98325-4 ◽

1985 ◽

Vol 26 (14) ◽

pp. 1735-1738 ◽

Cited By ~ 7

Author(s):

Katuyuki Nagai ◽

Shigeo Ukal ◽

Kenji Hayakawa ◽

Ken Kanematsu

Keyword(s):

Nucleic Acid ◽

Base Pair ◽

Ph Control ◽

Acid Base ◽

Binding Ability ◽

Nucleic Acid Base ◽

Hydrogen Bonded

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Nucleobase difunctionalized .beta.-cyclodextrins. Preparation and spectral observation of base stacking and the hydrogen-bonded nucleic acid base pair

The Journal of Organic Chemistry ◽

10.1021/jo00371a003 ◽

1986 ◽

Vol 51 (21) ◽

pp. 3931-3939 ◽

Cited By ~ 8

Author(s):

Katsuyuki Nagai ◽

Kenji Hayakawa ◽

Shigeo Ukai ◽

Ken Kanematsu

Keyword(s):

Nucleic Acid ◽

Base Pair ◽

Spectral Observation ◽

Base Stacking ◽

Acid Base ◽

Nucleic Acid Base ◽

Hydrogen Bonded

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Calculating stacking interactions in nucleic acid base-pair steps using spin-component scaling and local second order Møller–Plesset perturbation theory

Physical Chemistry Chemical Physics ◽

10.1039/b718691f ◽

2008 ◽

Vol 10 (19) ◽

pp. 2785 ◽

Cited By ~ 40

Author(s):

J. Grant Hill ◽

James A. Platts

Keyword(s):

Perturbation Theory ◽

Nucleic Acid ◽

Base Pair ◽

Second Order ◽

Spin Component ◽

Stacking Interactions ◽

Acid Base ◽

Nucleic Acid Base ◽

Moller Plesset ◽

Plesset Perturbation Theory

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A selective recognition mode of a nucleic acid base by an aromatic amino acid: L-phenylalanine-7-methylguanosine 5'-monophosphate stacking interaction

Nucleic Acids Research ◽

10.1093/nar/16.13.6175 ◽

1988 ◽

Vol 16 (13) ◽

pp. 6175-6190 ◽

Cited By ~ 22

Author(s):

T. Ishida ◽

M. Doi ◽

M. Inoue

Keyword(s):

Amino Acid ◽

Nucleic Acid ◽

Aromatic Amino Acid ◽

Selective Recognition ◽

Acid Base ◽

Stacking Interaction ◽

Nucleic Acid Base

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Prominent stacking interaction with aromatic amino acid by N-quarternization of nucleic acid base: X-ray crystallographic characteristics and biological implications

Archives of Biochemistry and Biophysics ◽

10.1016/0003-9861(90)90251-s ◽

1990 ◽

Vol 278 (1) ◽

pp. 217-227 ◽

Cited By ~ 12

Author(s):

Toshimasa Ishida ◽

Hitoshi Ueda ◽

Kayo Segawa ◽

Mitsunobu Doi ◽

Masatoshi Inoue

Keyword(s):

Amino Acid ◽

Nucleic Acid ◽

Aromatic Amino Acid ◽

Acid Base ◽

X Ray ◽

Stacking Interaction ◽

Nucleic Acid Base ◽

Crystallographic Characteristics

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