scholarly journals The impact of persistent colonization by Vibrio fischeri on the metabolome of the host squid Euprymna scolopes

2020 ◽  
Vol 223 (16) ◽  
pp. jeb212860
Author(s):  
Eric J. Koch ◽  
Silvia Moriano-Gutierrez ◽  
Edward G. Ruby ◽  
Margaret McFall-Ngai ◽  
Manuel Liebeke
Keyword(s):  
Vibrio Fischeri ◽  
Circulatory System ◽  
The Body ◽  
Mass Spectrometry Analysis ◽  
Gas Chromatography Mass Spectrometry ◽  
Euprymna Scolopes ◽  
Spectrometry Analysis ◽  
Host Sex ◽  
Species Specific ◽  
The Impact

ABSTRACTAssociations between animals and microbes affect not only the immediate tissues where they occur, but also the entire host. Metabolomics, the study of small biomolecules generated during metabolic processes, provides a window into how mutualistic interactions shape host biochemistry. The Hawaiian bobtail squid, Euprymna scolopes, is amenable to metabolomic studies of symbiosis because the host can be reared with or without its species-specific symbiont, Vibrio fischeri. In addition, unlike many invertebrates, the host squid has a closed circulatory system. This feature allows a direct sampling of the refined collection of metabolites circulating through the body, a focused approach that has been highly successful with mammals. Here, we show that rearing E. scolopes without its natural symbiont significantly affected one-quarter of the more than 100 hemolymph metabolites defined by gas chromatography mass spectrometry analysis. Furthermore, as in mammals, which harbor complex consortia of bacterial symbionts, the metabolite signature oscillated on symbiont-driven daily rhythms and was dependent on the sex of the host. Thus, our results provide evidence that the population of even a single symbiont species can influence host hemolymph biochemistry as a function of symbiotic state, host sex and circadian rhythm.

scholarly journals Phytochemical Screening of Etlingera elatior (Torch Ginger) Cultivated on Different Dosage of Biochar

2019 ◽  
pp. 1-6
Author(s):  
Isaac John Umaru ◽  
Benedict Samling ◽  
Hauwa A. Umaru
Keyword(s):  
Capillary Column ◽  
Mass Spectrometry Analysis ◽  
Gas Chromatography Mass Spectrometry ◽  
Spectrometry Analysis ◽  
Analytical Instruments ◽  
Phytochemical Composition ◽  
Fertilized Soil ◽  
The Impact ◽  
Etlingera Elatior

Objective: This study was carried out with an objective to investigate the impact of biochar on phytochemical composition in plant especially Etlingera elatior cultivated on different dosage of biochar. Methods: Etlingera elatior was cultivated on the pot with 20 cm diameter and 35 cm height. 3 replicates for pots of Etlingera elatior was cultivated and label as 0%, 5% and 20%. The ordinary farm soil without biochar (0%) as control, fertilized soil with biochar; 5% and 20%. In a net house and watered twice daily. The gas chromatography mass spectrometry analysis was performed by using a non-polar BPX-5 capillary column with an initial temperature of 50°C hold for five minutes and then increased to 300°C at a rate of 5.0°C per minutes and hold 10 minutes. The biochar samples were analysed using an ATR-FTIR equipped with diamond crystal, controlled by OMNIC software (Thermo Nicolet Analytical Instruments, Madison, WI). A flat tip powder press was used to achieve even distribution and contact. Results: The result showed significantly increased in the phytochemical composition with increase in the biochar concentration. At 0% phytol (13%), Hexadecanoic acid (9.76%), Neophytadiene (6.51%), coumarin (5.65%), precocene (5.27%) and caryophyllene (4.59%). At 5% are Dihydrocucurbitacin (13.69%), Niacinamide (11.02%), α-Limonene (10.01%), Phyrahen (9.23%), Phytol (7.24%) and Neophytadiene (5.75%) and at 20% Linoleic acid (39.98%), 2-pinen-4-ol (12.32%), Hexatriacontyl pentafluoropropionate (6.89%), Benzofuran (5.12%), Acethophenon (4.41%) and furfural (4.03%). Conclusion: Application of biochar on soil can increase nutrient availability and enhance the development of phytochemical composition in plants. Without biochar, the chemical composition Etlingera elatior extract was slighlyt low. At 5% and 20% biochar, some compounds are increasing and new were obtained compared to 0% biochar. Most of the compounds known to be secondary metabolite which are rich in medicinal values. Thus, biochar could be used to increase the quantity and quality of phytochemicals in plant especially medicinal plants.

Spectrophotometry Measurement of Polynuclear Aromatic Hydrocarbons in Hamilton Harbour Sediments

1991 ◽  
Vol 26 (1) ◽  
pp. 1-16 ◽  
Author(s):  
T.P. Murphy ◽  
H. Brouwer ◽  
M.E. Fox ◽  
E. Nagy
Keyword(s):  
Aromatic Hydrocarbons ◽  
Total Concentration ◽  
Coal Tar ◽  
Sediment Cores ◽  
Polynuclear Aromatic Hydrocarbons ◽  
Mass Spectrometry Analysis ◽  
Gas Chromatography Mass Spectrometry ◽  
Near Surface ◽  
Spectrometry Analysis ◽  
Hamilton Harbour

Abstract Eighty-one sediment cores were collected to determine the extent of coal tar contamination in a toxic area of Hamilton Harbour. Over 800 samples were analyzed by a UV spectrophotometric technique that was standardized with gas chromatography/mass spectrometry analysis. The coal tar distribution was variable. The highest concentrations were near the Stelco outfalls and the Hamilton-Wentworth combined sewer outfalls. The total concentration of the 16 polynuclear aromatic hydrocarbons (PAHs) in 48,300 m3 of near-surface sediments exceeded 200 µg/g.

scholarly journals Biodegradation and metabolic pathway of fenvalerate by Citrobacter freundii CD-9

AMB Express ◽  
2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Jie Tang ◽  
Dan Lei ◽  
Min Wu ◽  
Qiong Hu ◽  
Qing Zhang
Keyword(s):  
Environmental Pollution ◽  
Environmental Remediation ◽  
High Efficiency ◽  
Mass Spectrometry Analysis ◽  
Gas Chromatography Mass Spectrometry ◽  
Citrobacter Freundii ◽  
16S Rrna Sequence ◽  
Intracellular Enzyme ◽  
Pyrethroid Insecticides ◽  
Spectrometry Analysis

Abstract Fenvalerate is a pyrethroid insecticide with rapid action, strong targeting, broad spectrum, and high efficiency. However, continued use of fenvalerate has resulted in its widespread presence as a pollutant in surface streams and soils, causing serious environmental pollution. Pesticide residues in the soil are closely related to food safety, yet little is known regarding the kinetics and metabolic behaviors of fenvalerate. In this study, a fenvalerate-degrading microbial strain, CD-9, isolated from factory sludge, was identified as Citrobacter freundii based on morphological, physio-biochemical, and 16S rRNA sequence analysis. Response surface methodology analysis showed that the optimum conditions for fenvalerate degradation by CD-9 were pH 6.3, substrate concentration 77 mg/L, and inoculum amount 6% (v/v). Under these conditions, approximately 88% of fenvalerate present was degraded within 72 h of culture. Based on high-performance liquid chromatography and gas chromatography-mass spectrometry analysis, ten metabolites were confirmed after the degradation of fenvalerate by strain CD-9. Among them, o-phthalaldehyde is a new metabolite for fenvalerate degradation. Based on the identified metabolites, a possible degradation pathway of fenvalerate by C. freundii CD-9 was proposed. Furthermore, the enzyme localization method was used to study CD-9 bacteria and determine that its degrading enzyme is an intracellular enzyme. The degradation rate of fenvalerate by a crude enzyme solution for over 30 min was 73.87%. These results showed that strain CD-9 may be a suitable organism to eliminate environmental pollution by pyrethroid insecticides and provide a future reference for the preparation of microbial degradation agents and environmental remediation.

Feline Spongy Encephalopathy With a Mutation in the ASPA Gene

2021 ◽  
pp. 030098582110021
Author(s):  
Yuta Takaichi ◽  
James K. Chambers ◽  
Moeko Shiroma-Kohyama ◽  
Makoto Haritani ◽  
Yumi Une ◽  
...  
Keyword(s):  
Cerebral Cortex ◽  
Canavan Disease ◽  
Mass Spectrometry Analysis ◽  
Intensity Change ◽  
Gas Chromatography Mass Spectrometry ◽  
Clinical Genetic ◽  
Gene Encoding ◽  
Spongy Degeneration ◽  
Spectrometry Analysis ◽  
Dense Granules

Canavan disease is an autosomal recessive leukodystrophy caused by mutations in the gene encoding aspartoacylase (ASPA), which hydrolyses N-acetylaspartate (NAA) to acetate and aspartate. A similar feline neurodegenerative disease associated with a mutation in the ASPA gene is reported herein. Comprehensive clinical, genetic, and pathological analyses were performed on 4 affected cats. Gait disturbance and head tremors initially appeared at 1 to 19 months of age. These cats eventually exhibited dysstasia and seizures and died at 7 to 53 months of age. Magnetic resonance imaging of the brain revealed diffuse symmetrical intensity change of the cerebral cortex, brainstem, and cerebellum. Gas chromatography–mass spectrometry analysis of urine showed significant excretion of NAA. Genetic analysis of the 4 affected cats identified a missense mutation (c.859G>C) in exon 6 of the ASPA gene, which was not detected in 4 neurologically intact cats examined as controls. Postmortem analysis revealed vacuolar changes predominantly distributed in the gray matter of the cerebrum and brain stem as well as in the cerebellar Purkinje cell layer. Immunohistochemically, these vacuoles were surrounded by neurofilaments and sometimes contained MBP- and Olig2-positive cells. Ultrastructurally, a large number of intracytoplasmic vacuoles containing mitochondria and electron-dense granules were detected in the cerebral cortex. All 4 cats were diagnosed as spongy encephalopathy with a mutation in the ASPA gene, a syndrome analogous to human Canavan disease. The histopathological findings suggest that feline ASPA deficiency induces intracytoplasmic edema in neurons and oligodendrocytes, resulting in spongy degeneration of the central nervous system.

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