A transgene insertional mutation at an imprinted locus in the mouse genome

Development ◽  
1990 ◽  
Vol 108 (Supplement) ◽  
pp. 73-79
Author(s):  
Julie A. DeLoia ◽  
Davor Solter

Genetic imprinting in mice results in functional differences in the oocyte and spermatocyte genomes, as evidenced by both genetic and pronuclear transfer experiments. To gain insights into the molecular mechansims involved in the imprinting process, researchers have studied methylation phenotypes and expression of hemizygous transgenes associated with parental origin. In this report, we describe a transgenic mouse lineage in which expression of both the transgene and an endogenous gene at the insertion site are determined by the parent of origin. The mutation caused by transgene insertion shows variable expressivity and incomplete penetrance in addition to a modified dominant pattern of inheritance.

Development ◽  
1990 ◽  
Vol 108 (Supplement) ◽  
pp. 99-106 ◽  
Author(s):  
Wolf Reik ◽  
Sarah K. Howlett ◽  
M. Azim Surani

A number of transgenes in the mouse show variation in methylation and expression phenotypes dependent on parental transmission. It appears that there exist at least two types of transgene imprinting; one is retained on an essentially homozygous background, while the other requires heterozygosity at some modifying loci in the genome and is observed as differences in phenotype in reciprocal crosses. For this type of imprinting to occur, the parental origin of the modifier locus itself is important, and parental asymmetry may involve specific interactions between egg cytoplasm and the chromosomes. Based on the identification of ‘methylation polymorphism’ in the mouse genome, we also show that endogenous gene sequences can undergo imprinting by DNA methylation.


2017 ◽  
Vol 8 (s1) ◽  
pp. s76-s78 ◽  
Author(s):  
I. Blunk ◽  
M. Mayer ◽  
H. Hamann ◽  
N. Reinsch

Genomic imprinting is a term applied to an epigenetic phenomenon where alleles are fully or partially inactivated depending on their parental origin. The relevance of this kind of parent-of-origin effects (POEs) for agriculturally important traits is widely known. A model (imprinting model) with a transmitting ability (TA) as sire and a TA as dam has been proposed that provides an estimate of the imprinting variance, whether the allelic inactivation is maternal, paternal, full or partial. Although the model can be used in a reduced version, large data sets still prevent the imprinting variance from being estimated. To further reduce the size of the equation system, we developed a parsimonious imprinting model with genetic effects for male ancestors only, as the TA as dam is replaced by her father’s TA. This parsimonious model was applied to 1 366 160 Simmental fattening bulls with slaughter data available on killing out percentage, net BW gain, EUROP class and fat score in a linear and generalised linear version. The pedigrees contained up to 2 637 761 ancestors. Proportion of the total genetic variance attributed to POEs ranged between 8.6% and 17.0%. On average, the maternal gamete accounted for the greater proportion of the imprinting variance. An equivalent version of the parsimonious model facilitated the estimation of POEs with reliabilities ranging between zero and 0.97.


Genomics ◽  
1991 ◽  
Vol 10 (4) ◽  
pp. 1003-1008 ◽  
Author(s):  
David R. Beier ◽  
J.Richard Chaillet ◽  
Emmett V. Schmidt ◽  
Philip Leder

2009 ◽  
Vol 297 (3) ◽  
pp. H1003-H1009 ◽  
Author(s):  
Cordelia J. Barrick ◽  
Anping Dong ◽  
Rebekah Waikel ◽  
Drew Corn ◽  
Fanmuyi Yang ◽  
...  

Left ventricular (LV) hypertrophy (LVH) is an independent risk factor for cardiovascular mortality and is commonly caused by hypertension. In rodents, transverse aortic constriction (TAC) is a model regularly employed in mechanistic studies of the response of the LV to pressure overload. We previously reported that inbred strains of male mice manifest different cardiac responses to TAC, with C57BL/6J (B6) developing LV dilatation and impaired contractility and 129S1/SvImJ (129) males displaying concentric LVH. In the present study, we investigated sex and parent-of-origin effects on the response to TAC by comparing cardiac function, organ weights, expression of cardiac hypertrophy markers, and histology in female B6 and female 129 mice and in F1 progeny of reciprocal crosses between B6 and 129 mice (B6129F1 and 129B6F1). Five weeks after TAC, heart weight increased to the greatest extent in 129B6F1 mice and the least extent in 129 and B6129F1 mice. Female 129B6F1 and B6 mice were relatively protected from the increase in heart weight that occurs in their male counterparts with pressure overload. The response to TAC in 129 consomic mice bearing the B6 Y chromosome resembled that of 129 rather than 129B6F1 mice, indicating that the B6 Y chromosome does not account for the differences in the reciprocal cross. Our results suggest that susceptibility to LVH is more complex than simple Mendelian inheritance and that parental origin effects strongly impact the LV response to TAC in these commonly used inbred strains.


Blood ◽  
2005 ◽  
Vol 106 (11) ◽  
pp. 1596-1596
Author(s):  
Bin Yin ◽  
David A. Largaespada ◽  
James R. Downing

Abstract The AML1/ETO fusion gene is caused by chromosomal translocation t(8;21), which is among the most frequent chromosomal rearrangement seen in acute myeloid leukemia (AML). AML1/ETO functions in a dominant negative fashion to directly repress AML1-mediated transcriptional activation, and block the differentiation of myeloid progenitors. Notably, although it is oncogenic, AML1/ETO is not by itself sufficient to cause fully malignant AML, but can do so when there are concurrent oncogenic mutations (Higuchi 2002). This suggests that AML1/ETO requires cooperation with additional genetic alterations that are as yet largely unknown. The BXH-2 mouse strain is characterized by high frequency of spontaneous leukemia caused via insertional mutagenesis by a B-ecotropic murine leukemia virus. The proviral insertion site can then be used as a molecular tag, proviral insertion tag (PIT), to identify mutations/dysregulations of genes involved in leukemogenesis. Indeed, the BXH-2 strain has been utilized as a powerful forward genetic system to identify a number of leukemia-associated genes by our lab and collaborators. In this study, we have attempted to identify AML-related genes and pathways that could cooperate with AML1/ETO expression in development of AML. We have introduced the conditional AML1/ETO allele and Mx1-Cre, whose expression is induced by pIpC, into BXH-2 strain background to generate AEB mice after 4~6 consecutive backcrossing, and monitored daily these mice for sign of disease. Notably, the latency of leukemia in pIpC-injected AEB mice (mostly 5~8 months) is significantly shorter than that in saline-injected AEB control mice (mostly over one year). Immunophenotyping the tumor cells showed positivity for myeloid cell surface markers. Furthermore, leukemogenicity was tested and confirmed by transplanting the tumor cells generated from enlarged lymph nodes into B6C3F1 recipients. These data suggest that these mice developed a fatal, aggressive myeloid leukemia. Southern blot showed, that in these leukemic cells, the recombined allele of AML1/ETO was formed by Cre induction. Induced expression of AML1/ETO was not only detected in peripheral white blood cells but also in tumors. Importantly, these AML1/ETO AML also harbor clonal proviral insertions, indicating that AML1/ETO-initiated leukemia is dramatically accelerated by chronic retroviral infection in our model. To identify AML1/ETO-cooperative leukemia genes, we have isolated several PITs from AML1/ETO-accelerated leukemias. These PITs have also been mapped onto mouse genome using Celera and Ensembl mouse genome databases, and been found to target new candidate genes. Interestingly, we have discovered a new common PIT, which have not been reported in previous work which has identified over 2000 PITs. This common PIT targets a G-protein coupled receptor-like gene, a member of the GPCR family. We believe that these studies will provide important information for better understanding the mechanisms of development of leukemia with t(8;21), and reveal promising candidate genes or pathways serving as the potential therapeutic targets for improving AML treatment.


Blood ◽  
2010 ◽  
Vol 116 (21) ◽  
pp. 2499-2499
Author(s):  
Rachel L Novak ◽  
David P Harper ◽  
David L. Caudell ◽  
Sarah H Beachy ◽  
Yang Jo Chung ◽  
...  

Abstract Abstract 2499 Acute myeloid leukemias (AMLs) are thought to result from a series of complementary mutations that affect several vital pathways, including differentiation, self-renewal, apoptosis, and proliferation. Several mutations associated with AML (MLL fusions, NUP98 fusions, CALM-AF10 fusion, and NPM1 mutations) are thought to impair hematopoietic differentiation by dysregulation of target genes; one of the most consistently dysregulated target genes is HOXA9. Mice that express a CALM-AF10 (CA10) or NUP98-HOXD13 (NHD13) fusion gene overexpress HOXA9 and develop AML with a delayed onset and incomplete penetrance, suggesting the need for complementary mutations. We have used three techniques including candidate gene resequencing, retroviral insertional mutagenesis (RIM), and gene expression profiling to compare and contrast the complementary mutations that occur in these mice. The frequency of Ras pathway mutations is similar for both CA10 (20%) and NHD13 (32%) leukemic mice, and previously reported RIM studies identified common integration sites near Mn1 and Evi1 in both models, suggesting that dysregulation of similar collaborative pathways can lead to leukemia in both models. However, there were significant differences between these models. The aforementioned RIM studies identified Zeb2 as the most frequent insertion site for CA10 leukemias, suggesting that Zeb2 collaborated with CA10, whereas no Zeb2 insertions were found in the NHD13 RIM study. Another distinction between the NHD13 and CA10 leukemias is the expression of the HOXA9 co-regulatory factor Meis1. Meis1 is markedly upregulated in bone marrow from clinically healthy, pre-leukemic CA10 mice and CA10 leukemic tissues compared to wildtype bone marrow. Conversely, Meis1 expression was decreased in bone marrow from clinically healthy NHD13 mice compared to wildtype, and only occasionally overexpressed in NHD13 leukemias. Interestingly, RIM analysis of NHD13 mice identified Meis1 as the most frequent insertion site, suggesting that Meis1 overexpression can collaborate with NHD13 during leukemic transformation. Flt3, which is frequently mutated in patients with AML, has been shown to be transcriptionally activated by Meis1. Of note, Flt3 is consistently overexpressed in CA10 leukemias but is overexpressed only in those NHD13 leukemias that have upregulated Meis1. Intriguingly, the frequency of Flt3 activating mutations in CA10 leukemias (which overexpress Flt3) was 25%, but none were found in the NHD13 leukemias (which do not overexpress Flt3). Lastly, using gene expression arrays, N-myc was identified as one of the most differentially overexpressed mRNAs, suggesting that it may cooperate with CA10 during leukemic transformation. Furthermore, N-myc has recently been shown to promote AML in mice, and our preliminary experiments suggest that N-myc and CA10 collaborate and lead to increased cell number and replating potential in bone marrow colony formation assays. In conclusion, we have taken several genetic approaches to identify key similarities and differences in the biology of two leukemic models (CA10 and NHD13), both of which overexpress HOXA9. Disclosures: No relevant conflicts of interest to declare.


Author(s):  
Hisato Kobayashi

Genomic imprinting is an epigenetic phenomenon that results in unequal expression of homologous maternal and paternal alleles. This process is initiated in the germline, and the parental epigenetic memories can be maintained following fertilization and induce further allele-specific transcription and chromatin modifications of single or multiple neighboring genes, known as imprinted genes. To date, more than 260 imprinted genes have been identified in the mouse genome, most of which are controlled by imprinted germline differentially methylated regions (gDMRs) that exhibit parent-of-origin specific DNA methylation, which is considered primary imprint. Recent studies provide evidence that a subset of gDMR-less, placenta-specific imprinted genes is controlled by maternal-derived histone modifications. To further understand DNA methylation-dependent (canonical) and -independent (non-canonical) imprints, this review summarizes the loci under the control of each type of imprinting in the mouse and compares them with the respective homologs in other rodents. Understanding epigenetic systems that differ among loci or species may provide new models for exploring genetic regulation and evolutionary divergence.


Author(s):  
Chiara Sacco ◽  
Cinzia Viroli ◽  
Mario Falchi

AbstractGenomic imprinting is an epigenetic mechanism that leads to differential contributions of maternal and paternal alleles to offspring gene expression in a parent-of-origin manner. We propose a novel test for detecting the parent-of-origin effects (POEs) in genome wide genotype data from related individuals (twins) when the parental origin cannot be inferred. The proposed method exploits a finite mixture of linear mixed models: the key idea is that in the case of POEs the population can be clustered in two different groups in which the reference allele is inherited by a different parent. A further advantage of this approach is the possibility to obtain an estimation of parental effect when the parental information is missing. We will also show that the approach is flexible enough to be applicable to the general scenario of independent data. The performance of the proposed test is evaluated through a wide simulation study. The method is finally applied to known imprinted genes of the MuTHER twin study data.


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