Simplified Method to Measure Mouse Fertility

Endocrinology ◽  
2020 ◽  
Vol 161 (8) ◽  
Author(s):  
David J Handelsman ◽  
Kirsty A Walters ◽  
Lam P Ly

Abstract Estimating breeding performance from mouse mating trials has focused on lifetime mating trials, which are too slow and costly for characterizing the many novel genetic mouse lines produced in fertility research, an underpinning of reproductive pathophysiology research. This study introduces the fertility index, defined as the slope of the regression of cumulative number of pups produced by a female over elapsed time in a monogamous mating trial. By using a robust resampling technique, the Theil-Sen estimator (widely available in free or niche statistical software), to estimate the fertility index, the present study of 410 mating trials of mice from 7 genotypes lasting a median of 10 litters shows that it is possible to estimate the fertility index reliably over as few as 4 litters.

2021 ◽  
Vol 12 ◽  
Author(s):  
Cory W. Baumann ◽  
Angus Lindsay ◽  
Sylvia R. Sidky ◽  
James M. Ervasti ◽  
Gordon L. Warren ◽  
...  

Weakness and atrophy are key features of Duchenne muscular dystrophy (DMD). Dystrophin is one of the many proteins within the dystrophin glycoprotein complex (DGC) that maintains plasmalemmal integrity and cellular homeostasis. The dystrophin-deficient mdx mouse is also predisposed to weakness, particularly when subjected to eccentric (ECC) contractions due to electrophysiological dysfunction of the plasmalemma. Here, we determined if maintenance of plasmalemmal excitability during and after a bout of ECC contractions is dependent on intact and functional DGCs rather than, solely, dystrophin expression. Wild-type (WT) and dystrophic mice (mdx, mL172H and Sgcb−/− mimicking Duchenne, Becker and Limb-girdle Type 2E muscular dystrophies, respectively) with varying levels of dystrophin and DGC functionality performed 50 maximal ECC contractions with simultaneous torque and electromyographic measurements (M-wave root-mean-square, M-wave RMS). ECC contractions caused all mouse lines to lose torque (p<0.001); however, deficits were greater in dystrophic mouse lines compared to WT mice (p<0.001). Loss of ECC torque did not correspond to a reduction in M-wave RMS in WT mice (p=0.080), while deficits in M-wave RMS exceeded 50% in all dystrophic mouse lines (p≤0.007). Moreover, reductions in ECC torque and M-wave RMS were greater in mdx mice compared to mL172H mice (p≤0.042). No differences were observed between mdx and Sgcb−/− mice (p≥0.337). Regression analysis revealed ≥98% of the variance in ECC torque loss could be explained by the variance in M-wave RMS in dystrophic mouse lines (p<0.001) but not within WT mice (R2=0.211; p=0.155). By comparing mouse lines that had varying amounts and functionality of dystrophin and other DGC proteins, we observed that (1) when all DGCs are intact, plasmalemmal action potential generation and conduction is maintained, (2) deficiency of the DGC protein β-sarcoglycan is as disruptive to plasmalemmal excitability as is dystrophin deficiency and, (3) some functionally intact DGCs are better than none. Our results highlight the significant role of the DGC plays in maintaining plasmalemmal excitability and that a collective synergism (via each DGC protein) is required for this complex to function properly during ECC contractions.


Author(s):  
Valery Kostege ◽  
Sergey Chernyshev ◽  
Vladimir Vassiliev

Experimental and theoretical investigations show that unsteady effects like moving wakes, tip vortices, passing shocks, pulsating injections and other similar structures significantly affect the aerodynamic characteristics of turbines and compressors. They also influence the thermal state and lifetime of components. Therefore it is very important for designers of turbomachines to properly simulate these effects. On the other hand, time-accurate computations are still expensive and require substantial resources in CPU and computer memory. Moreover the elapsed time is high. However in certain cases the numerical model for unsteady calculations can be simplified, allowing proper capture of the unsteadiness impact, but with much less required computing capacity. This makes the approach acceptable for design applications. Such a simplified method, applicable to a simulation of a steady jets array interaction with rotating components, is described in this paper. The advantages and limitations are discussed, and the validation results and application examples are presented.


2021 ◽  
Vol 3 (1) ◽  
Author(s):  
Daryati Daryati ◽  
Riyan Arthur ◽  
Tommy Eka Miharja ◽  
Nasaruddin Ishak ◽  
Nur Rochimah

This service is carried out on the basis of statistics which is considered a difficult science because there are many formulas that require accuracy and precision in their calculations. As well as the many problems of students' inability to access data processing software caused by the low level of literacy in students. This service is a training activity for data processing research based on statistical software that aims to improve the quality of human resources through the ability of students to process research data. The partners of this service are universities around BODETABEK with a focus on training activities on statistical software-based data analysis techniques such as SPSS and JASP for final year students at BODETABEK. The methods used in this training activity include lectures, discussions, questions and answers, direct demonstrations and assignments. These methods were developed according to the current situation and conditions. The target to be achieved in the implementation of this activity is to improve the ability of students to carry out data analysis with the help of software such as SPSS and JASP. In addition, as an output, coaching participants are expected to be able to use SPSS and JASP software in thesis and research which can then be uploaded


2020 ◽  
Vol 493 (4) ◽  
pp. 5972-5986 ◽  
Author(s):  
Sungryong Hong ◽  
Donghui Jeong ◽  
Ho Seong Hwang ◽  
Juhan Kim ◽  
Sungwook E Hong ◽  
...  

ABSTRACT By utilizing large-scale graph analytic tools implemented in the modern big data platform, apache spark, we investigate the topological structure of gravitational clustering in five different universes produced by cosmological N-body simulations with varying parameters: (1) a WMAP 5-yr compatible ΛCDM cosmology, (2) two different dark energy equation of state variants, and (3) two different cosmic matter density variants. For the big data calculations, we use a custom build of standalone Spark/Hadoop cluster at Korea Institute for Advanced Study and Dataproc Compute Engine in Google Cloud Platform with sample sizes ranging from 7 to 200 million. We find that among the many possible graph-topological measures, three simple ones: (1) the average of number of neighbours (the so-called average vertex degree) α, (2) closed-to-connected triple fraction (the so-called transitivity) $\tau _\Delta$, and (3) the cumulative number density ns ≥ 5 of subgraphs with connected component size s ≥ 5, can effectively discriminate among the five model universes. Since these graph-topological measures are directly related with the usual n-points correlation functions of the cosmic density field, graph-topological statistics powered by big data computational infrastructure opens a new, intuitive, and computationally efficient window into the dark Universe.


2018 ◽  
Vol 41 ◽  
Author(s):  
Wei Ji Ma

AbstractGiven the many types of suboptimality in perception, I ask how one should test for multiple forms of suboptimality at the same time – or, more generally, how one should compare process models that can differ in any or all of the multiple components. In analogy to factorial experimental design, I advocate for factorial model comparison.


2020 ◽  
Vol 43 ◽  
Author(s):  
David Spurrett

Abstract Comprehensive accounts of resource-rational attempts to maximise utility shouldn't ignore the demands of constructing utility representations. This can be onerous when, as in humans, there are many rewarding modalities. Another thing best not ignored is the processing demands of making functional activity out of the many degrees of freedom of a body. The target article is almost silent on both.


2020 ◽  
Vol 43 ◽  
Author(s):  
Michael Tomasello

Abstract My response to the commentaries focuses on four issues: (1) the diversity both within and between cultures of the many different faces of obligation; (2) the possible evolutionary roots of the sense of obligation, including possible sources that I did not consider; (3) the possible ontogenetic roots of the sense of obligation, including especially children's understanding of groups from a third-party perspective (rather than through participation, as in my account); and (4) the relation between philosophical accounts of normative phenomena in general – which are pitched as not totally empirical – and empirical accounts such as my own. I have tried to distinguish comments that argue for extensions of the theory from those that represent genuine disagreement.


1997 ◽  
Vol 161 ◽  
pp. 179-187
Author(s):  
Clifford N. Matthews ◽  
Rose A. Pesce-Rodriguez ◽  
Shirley A. Liebman

AbstractHydrogen cyanide polymers – heterogeneous solids ranging in color from yellow to orange to brown to black – may be among the organic macromolecules most readily formed within the Solar System. The non-volatile black crust of comet Halley, for example, as well as the extensive orangebrown streaks in the atmosphere of Jupiter, might consist largely of such polymers synthesized from HCN formed by photolysis of methane and ammonia, the color observed depending on the concentration of HCN involved. Laboratory studies of these ubiquitous compounds point to the presence of polyamidine structures synthesized directly from hydrogen cyanide. These would be converted by water to polypeptides which can be further hydrolyzed to α-amino acids. Black polymers and multimers with conjugated ladder structures derived from HCN could also be formed and might well be the source of the many nitrogen heterocycles, adenine included, observed after pyrolysis. The dark brown color arising from the impacts of comet P/Shoemaker-Levy 9 on Jupiter might therefore be mainly caused by the presence of HCN polymers, whether originally present, deposited by the impactor or synthesized directly from HCN. Spectroscopic detection of these predicted macromolecules and their hydrolytic and pyrolytic by-products would strengthen significantly the hypothesis that cyanide polymerization is a preferred pathway for prebiotic and extraterrestrial chemistry.


Author(s):  
K. Yoshida ◽  
F. Murata ◽  
S. Ohno ◽  
T. Nagata

IntroductionSeveral methods of mounting emulsion for radioautography at the electron microscopic level have been reported. From the viewpoint of quantitative radioautography, however, there are many critical problems in the procedure to produce radioautographs. For example, it is necessary to apply and develop emulsions in several experimental groups under an identical condition. Moreover, it is necessary to treat a lot of grids at the same time in the dark room for statistical analysis. Since the complicated process and technical difficulties in these procedures are inadequate to conduct a quantitative analysis of many radioautographs at once, many factors may bring about unexpected results. In order to improve these complicated procedures, a simplified dropping method for mass production of radioautographs under an identical condition was previously reported. However, this procedure was not completely satisfactory from the viewpoint of emulsion homogeneity. This paper reports another improved procedure employing wire loops.


Author(s):  
Benjamin F. Trump ◽  
Irene K. Berezesky ◽  
Raymond T. Jones

The role of electron microscopy and associated techniques is assured in diagnostic pathology. At the present time, most of the progress has been made on tissues examined by transmission electron microscopy (TEM) and correlated with light microscopy (LM) and by cytochemistry using both plastic and paraffin-embedded materials. As mentioned elsewhere in this symposium, this has revolutionized many fields of pathology including diagnostic, anatomic and clinical pathology. It began with the kidney; however, it has now been extended to most other organ systems and to tumor diagnosis in general. The results of the past few years tend to indicate the future directions and needs of this expanding field. Now, in addition to routine EM, pathologists have access to the many newly developed methods and instruments mentioned below which should aid considerably not only in diagnostic pathology but in investigative pathology as well.


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