scholarly journals Isselite, Cu6(SO4)(OH)10(H2O)4⋅H2O, a new mineral species from Eastern Liguria, Italy

2020 ◽  
Vol 84 (5) ◽  
pp. 653-661
Author(s):  
Cristian Biagioni ◽  
Donato Belmonte ◽  
Cristina Carbone ◽  
Roberto Cabella ◽  
Nicola Demitri ◽  
...  
Keyword(s):  
New Mineral ◽  
Optical Orientation ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Orthorhombic Space Group ◽  
Light Blue ◽  
X Ray ◽  
Cell Parameters ◽  
New Mineral Species ◽  
Mining Complex

AbstractThe new mineral isselite, Cu6(SO4)(OH)10(H2O)4⋅H2O, has been discovered in the Lagoscuro mine, Monte Ramazzo mining complex, Genoa, Eastern Liguria, Italy. It occurs as sprays of blue acicular crystals, up to 0.1 mm long, associated with brochantite and posnjakite. Streak is light blue and the lustre is vitreous. Isselite is brittle, with irregular fracture and good cleavage on {001} and {100}. Measured density is 3.00(2) g/cm3. Isselite is optically biaxial (–), with α = 1.599(2), β = 1.633(2) and γ = 1.647(2) (determined in white light). The measured 2V is 63.6(5)°. Dispersion is moderate, with r > v. The optical orientation is X = b, Y = c and Z = a. Isselite is pleochroic, with X = light blue, Y = blue, Z = blue; X << Z < Y. Electron microprobe analyses give (wt.%): SO3 11.45(21), MgO 0.31(7), CoO 1.07(14), NiO 9.41(90), CuO 51.29(126), ZnO 1.10(20), H2Ocalc 24.21, total 98.84. The empirical formula of isselite, based on Σ(Mg,Co,Ni,Cu,Zn) = 6 atoms per formula unit, is (Cu4.80Ni0.94Co0.11Zn0.10Mg0.06)Σ6.00(S1.06O4.19)(OH)10⋅5H2O. Isselite is orthorhombic, space group Pmn21, with unit-cell parameters a = 6.8070(14), b = 5.8970(12), c = 20.653(4) Å, V = 829.0(3) Å3 and Z = 2. The crystal structure of isselite was refined from single-crystal X-ray diffraction data to R1 = 0.067 on the basis of 2964 reflections with Fo > 4σ(Fo). It shows a layered structure formed by zig-zag {001} layers of Cu-centred polyhedra. Sulfate groups occur in the interlayer along with one H2O group. Isselite is chemically related to redgillite and montetrisaite.

scholarly journals Crystallochemical aspects of two microlite-group new mineral species

2014 ◽  
Vol 70 (a1) ◽  
pp. C1095-C1095
Author(s):  
Marcelo Andrade ◽  
Javier Ellena ◽  
Daniel Atencio
Keyword(s):  
Microprobe Analysis ◽  
Electron Microprobe Analysis ◽  
New Mineral ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Space Group ◽  
X Ray ◽  
Cell Parameters ◽  
New Mineral Species ◽  
Group 1

Fluorcalciomicrolite, Ca1.5Ta2O6F, and hydroxycalciomicrolite, Ca1.5Ta2O6(OH), are new microlite-group [1] minerals found in the Volta Grande pegmatite, Nazareno, Minas Gerais, Brazil. Both occur as octahedral and rhombododecahedral crystals. The crystals are colourless, yellow and translucent, with vitreous to resinous luster. The densities calculated for fluorcalciomicrolite [2] and hydroxycalciomicrolite are 6.160 and 6.176 g/cm3, respectively. The empirical formulae obtained from electron microprobe analysis are (Ca1.07Na0.81□0.12)Σ2(Ta1.84Nb0.14Sn0.02)Σ2[O5.93(OH)0.07]Σ6.00[F0.79(OH)0.21] for fluorcalciomicrolite and (Ca1.48Na0.06Mn0.01)Σ1.55(Ta1.88Nb0.11Sn0.01)Σ2O6[(OH)0.76F0.20O0.04] for hydroxycalmicrolite. Fluorcalciomicrolite is cubic, space group Fd-3m, a = 10.4191(6) Å, V = 1131.07(11) Å3, and Z = 8. Hydroxycalciomicrolite is also cubic; however, the presence of P-lattice is confirmed by the large number of weak reflections observed by X-ray diffraction. As a result, the space group is P4332 and unit-cell parameters are a = 10.4211(8) Å, and V = 1131.72(15) Å3.

Demagistrisite, the Missing Link in a Polysomatic Series from Lawsonite to Orientite

2021 ◽  
Author(s):  
Fernando Cámara ◽  
Anthony R. Kampf ◽  
Fabrizio Nestola ◽  
Marco E. Ciriotti ◽  
Deborah Spartà ◽  
...  
Keyword(s):  
Room Temperature ◽  
New Mineral ◽  
Optical Orientation ◽  
Unit Cell Parameters ◽  
Orthorhombic Space Group ◽  
X Ray ◽  
Cell Parameters ◽  
Orange Yellow ◽  
Cation Sites ◽  
Large Cation

Abstract Demagistrisite, ideally BaCa2Mn3+4(Si3O10)(Si2O7)(OH)4·3H2O, is a new mineral found at the Cerchiara mine (eastern Liguria, La Spezia province, Italy). The ore consists of rhythmic interlaying of braunite-bearing metasediments (5–15 cm thick) and hematite-rich cherts. Demagistrisite occurs in association with cerchiaraite-(Mn), namansilite, noelbensonite, orientite, richterite, ruizite, and saponite in matrix consisting of braunite, calcite, cryptomelane, orthoclase, and quartz. Demagistrisite crystals occur as tightly intergrown blades or as millimeter-sized prisms and needles with square cross-section, typically with irregular terminations, and rarely terminated by a low-angle pyramid. The mineral is orange brown to red brown, streak is beige, and luster is vitreous, translucent to transparent. Fracture is irregular. In thin section, it is orange brown. The mineral is optically biaxial (–) with α 1.805(5), β 1.825(5), γ 1.8305(5) (white light); 2Vmeas 58(5)°, 2Vcalc 54.7°; optical orientation X = c, Y = b, Z = a. Dispersion is very strong, r &gt; v. Pleochroism is strong with X orange yellow, Y red brown, Z red brown; X &lt;&lt; Z &lt; Y. It is unreactive in concentrated HCl at room temperature. Thirteen chemical analyses by WDS-EMPA gave the following empirical formula (based on 24 O apfu): (Ba0.69Ca1.25Mn2+0.70Sr0.21Na0.12Mg0.02)Σ2.99(Mn3+3.97Al0.03)Σ4(Si3O10)(Si2O7)(OH)3.87·3.13H2O. The mineral is orthorhombic, space group Amm2, with unit-cell parameters a 16.312(8), b 6.176(4), c 9.075(6) Å, V 914.2(10) Å3, and Z = 2. The seven strongest X-ray powder diffraction lines are [d Å (I%; hkl)]: 16.21 (49; 100), 4.86 (44; 111), 4.34 (56; 102,211), 2.871 (54; 220), 2.731 (100; 511,013), 2.671 (74; 320,113,502), and 2.426 (51; 222,313,611). The crystal structure (R1 = 0.0572 for 1485 reflections with I &gt; 2σI) is based on straight edge-sharing chains of Mn3+-centered octahedra extending along [010], which are bridged by disilicate (Si2O7) and trisilicate (Si3O10) groups, yielding a framework. Cavities within this framework contain two large cation sites. The structure of demagistrisite can be considered transitional between the structures of orientite and noelbensonite. Demagistrisite is named in honor of Leandro de Magistris (1906–1990).

scholarly journals Tazzoliite: a new mineral with a pyrochlore-related structure from the Euganei Hills, Padova, Italy

2012 ◽  
Vol 76 (4) ◽  
pp. 827-838 ◽  
Author(s):  
F. Cámara ◽  
F. Nestola ◽  
L. Bindi ◽  
A. Guastoni ◽  
F. Zorzi ◽  
...  
Keyword(s):  
Pyrochlore Structure ◽  
New Mineral ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Orthorhombic Space Group ◽  
Calculated Density ◽  
Oh Groups ◽  
X Ray ◽  
Cell Parameters ◽  
Perfect Cleavage

AbstractTazzoliite, ideally Ba2CaSr0.5Na0.5Ti2Nb3SiO17[PO2(OH)2]0.5, is a new mineral (IMA 2011-018) from Monte delle Basse, Euganei Hills, Galzignano Terme, Padova, Italy. It occurs as lamellar pale orange crystals, which are typically a few m m thick and up to 0.4 mm long, closely associated with a diopsidic pyroxene and titanite. Tazzoliite is transparent. It has a white streak, a pearly lustre, is not fluorescent and has a hardness of 6 (Mohs' scale). The tenacity is brittle and the crystals have a perfect cleavage along {010}. The calculated density is 4.517 g cm–3. Tazzoliite is biaxial (–) with 2Vmeas of ~50º, it is not pleochroic and the average refractive index is 2.04. No twinning was observed. Electronmicroprobe analyses gave the following chemical formula: (Ba1.93Ca1.20Sr0.52Na0.25Fe0.102+)Σ4 (Nb2.88Ti2.05Ta0.07Zr0.01V0.015+)Σ5.02SiO17[(P0.13Si0.12S0.07)Σ0.32O0.66(OH)0.66][F0.09(OH)0.23]Σ0.32.Tazzoliite is orthorhombic, space group Fmmm, with unit-cell parameters a = 7.4116(3), b = 20.0632(8), c = 21.4402(8) Å, V = 3188.2(2) Å3 and Z = 8. The crystal structure, obtained from single-crystal X-ray diffraction data, was refined to R1(F2) = 0.063. It consists of a framework of Nb(Ti) octahedra and BaO7 polyhedra sharing apexes or edges, and Si tetrahedra sharing apexes with Nb(Ti) octahedra and BaO7 polyhedra. The structure, which is related to the pyrochlore structure, contains three Nb(Ti) octahedra: two are Nb dominant and one is Ti dominant. Chains of A2O8 polyhedra [A2 being occupied by Sr(Ca, Fe)] extend along [100] and are surrounded by Nb octahedra. Channels formed by six Nb(Ti) octahedra and two tetrahedra, or four A1O8(OH) polyhedra (A1 being occupied by Ba), alternate along [100]. The channels are partially occupied by [PO2(OH)2] in two possible mutually exclusive positions, alternating with fully occupied A3O7 polyhedral pairs [A3 being occupied by Ca(Na)]. The seven strongest X-ray powder diffraction lines [d in Å (I/I0) (hkl)] are: 3.66 (60) (044), 3.16 (30) (153), 3.05 (100) (204), 2.98 (25) (240), 2.84 (50) (064), 1.85 (25) (400) and 1.82 (25) (268). Raman spectra of tazzoliite were collected in the range 150–3700 cm–1 and confirm the presence of OH groups. Tazzoliite is named in honour of Vittorio Tazzoli in recognition of his contributions to the fields of mineralogy and crystallography.

Arrheniusite-(Ce), CaMg[(Ce7Y3)Ca5](SiO4)3(Si3B3O18)(AsO4)(BO3)F11, a New Member of the Vicanite Group, from the Östanmossa Mine, Norberg, Sweden

2021 ◽  
Author(s):  
Dan Holtstam ◽  
Luca Bindi ◽  
Paola Bonazzi ◽  
Hans-Jürgen Förster ◽  
Ulf B. Andersson
Keyword(s):  
Structure Refinement ◽  
New Mineral ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Calculated Density ◽  
Epma Data ◽  
X Ray ◽  
Cell Parameters ◽  
Greenish Yellow ◽  
The Ideal

ABSTRACT Arrheniusite-(Ce) is a new mineral (IMA 2019-086) from the Östanmossa mine, one of the Bastnäs-type deposits in the Bergslagen ore region, Sweden. It occurs in a metasomatic F-rich skarn, associated with dolomite, tremolite, talc, magnetite, calcite, pyrite, dollaseite-(Ce), parisite-(Ce), bastnäsite-(Ce), fluorbritholite-(Ce), and gadolinite-(Nd). Arrheniusite-(Ce) forms anhedral, greenish-yellow translucent grains, exceptionally up to 0.8 mm in diameter. It is optically uniaxial (–), with ω = 1.750(5), ε = 1.725(5), and non-pleochroic in thin section. The calculated density is 4.78(1) g/cm3. Arrheniusite-(Ce) is trigonal, space group R3m, with unit-cell parameters a = 10.8082(3) Å, c = 27.5196(9) Å, and V = 2784.07(14) Å3 for Z = 3. The crystal structure was refined from X-ray diffraction data to R1 = 3.85% for 2286 observed reflections [Fo &gt; 4σ(Fo)]. The empirical formula for the fragment used for the structural study, based on EPMA data and results from the structure refinement, is: (Ca0.65As3+0.35)Σ1(Mg0.57Fe2+0.30As5+0.10Al0.03)Σ1[(Ce2.24Nd2.13La0.86Gd0.74Sm0.71Pr0.37)Σ7.05(Y2.76Dy0.26Er0.11Tb0.08Tm0.01Ho0.04Yb0.01)Σ3.27Ca4.14]Σ14.46(SiO4)3[(Si3.26B2.74)Σ6O17.31F0.69][(As5+0.65Si0.22P0.13)Σ1O4](B0.77O3)F11; the ideal formula obtained is CaMg[(Ce7Y3)Ca5](SiO4)3(Si3B3O18)(AsO4)(BO3)F11. Arrheniusite-(Ce) belongs to the vicanite group of minerals and is distinct from other isostructural members mainly by having a Mg-dominant, octahedrally coordinated site (M6); it can be considered a Mg-As analog to hundholmenite-(Y). The threefold coordinated T5 site is partly occupied by B, like in laptevite-(Ce) and vicanite-(Ce). The mineral name honors C.A. Arrhenius (1757–1824), a Swedish officer and chemist, who first discovered gadolinite-(Y) from the famous Ytterby pegmatite quarry.

scholarly journals Purification, crystallization and preliminary crystallographic analysis of a 4-thiouridine synthetase–RNA complex

2013 ◽  
Vol 69 (4) ◽  
pp. 421-424 ◽  
Author(s):  
Peter-Thomas Naumann ◽  
Charles T. Lauhon ◽  
Ralf Ficner
Keyword(s):  
Diffraction Data ◽  
Thermotoga Maritima ◽  
Crystallographic Analysis ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Orthorhombic Space Group ◽  
X Ray ◽  
Cell Parameters ◽  
Dependent Modification ◽  
Rna Complex

The sulfurtransferase 4-thiouridine synthetase (ThiI) is involved in the ATP-dependent modification of U8 in tRNA. ThiI fromThermotoga maritimawas cloned, overexpressed and purified. A complex comprising ThiI and a truncated tRNA was prepared and crystallized, and X-ray diffraction data were collected to a resolution of 3.5 Å. The crystals belonged to the orthorhombic space groupP212121, with unit-cell parametersa= 102.9,b= 112.8,c= 132.8 Å.

scholarly journals Na-dominant (at the M2 site) eudialyte analogue: crystal structure and indicatory significance

2020 ◽  
Vol 9 ◽  
pp. 19-25
Author(s):  
R. K. Rastsvetaeva ◽  
◽  
N. V. Chukanov ◽  
Ch. Schäfer ◽  
Keyword(s):  
Crystal Structure ◽  
Electron Probe ◽  
New Mineral ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Eudialyte Group ◽  
X Ray ◽  
Cell Parameters ◽  
Atomic Displacements ◽  
Alkaline Massif

Minerals of the eudialyte group from ultra-agpaitic associations are often characterized by high contents (up to the dominance) of sodium at the M2 site, which is populated with iron in eudialyte. The features of blocky isomorphism with the replacement of IVFe2+ by IVNa and VNa at the M2 micro-region are discussed. Using the methods of electron probe microanalysis, X-ray diffraction and IR spectroscopy, a potentially new mineral, M2Na-dominant analogue of eudialyte from the Ilimaussaq alkaline massif (Greenland), was investigated. Its crystal structure was refined to R = 5.6 % in the anisotropic approximation of atomic displacements using 1095 independent reflections with F > 3(F). The unit-cell parameters are: a = 14.208(1), c = 30.438(1) Å, V = 5321(1) Å3; the space group is R-3m. The idealized formula of the mineral is (Z = 3): (Na,H3O)15Ca6Zr3[Na2Fe][Si26O72](OH)2Cl∙2H2O.

A new mineral, zincolibethenite, CuZnPO4OH, a stoichiometric species of specific site occupancy

2005 ◽  
Vol 69 (2) ◽  
pp. 145-153 ◽  
Author(s):  
R. S. W. Braithwaite ◽  
R. G. Pritchard ◽  
W. H. Paar ◽  
R. A. D. Pattrick
Keyword(s):  
Atmospheric Pressure ◽  
Site Occupancy ◽  
New Mineral ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Cation Site ◽  
Calculated Density ◽  
X Ray ◽  
Cell Parameters ◽  
Jahn Teller

AbstractTiny green crystals from Kabwe, Zambia, associated with hopeite and tarbuttite (and probably first recorded in 1908 but never adequately characterized because of their scarcity) have been studied by X-ray diffraction, microchemical and electron probe microanalysis, infrared spectroscopy, and synthesis experiments. They are shown to be orthorhombic, stoichiometric CuZnPO4OH, of species rank, forming the end-member of a solid-solution series to libethenite, Cu2PO4OH, and are named zincolibethenite. The libethenite structure is unwilling to accommodate any more Zn substituting for Cu at atmospheric pressure, syntheses using Zn-rich solutions precipitating a mixture of zincolibethenite with hopeite, Zn3(PO4)2.4H2O. Single-crystal X-ray data confirm that the Cu(II) occupies the Jahn-Teller distorted 6-coordinate cation site in the libethenite lattice, and the Zn(II) occupies the 5-coordinate site. The space group of zincolibethenite is Pnnm, the same as that of libethenite, with unit-cell parameters a = 8.326, b = 8.260, c = 5.877 Å , V = 404.5 Å 3, Z = 4, calculated density = 3.972 g/cm3 (libethenite has a = 8.076, b = 8.407, c = 5.898 Å , V = 400.44 Å 3, Z = 4, calculated density = 3.965 g/cm3). Zincolibethenite is biaxial negative, with 2Vα(calc.) of 49°, r<v, and α = 1.660, β = 1.705, and γ = 1.715 The mineral is named for its relationship to libethenite.

Leisingite, Cu(Mg,Cu,Fe,Zn)2Te6+O6·6H2O, a new mineral species from the Centennial Eureka mine, Juab County, Utah

1996 ◽  
Vol 60 (401) ◽  
pp. 653-657 ◽  
Author(s):  
Andrew C. Roberts ◽  
Lee A. Groat ◽  
Joel D. Grice ◽  
Robert A. Gault ◽  
Martin C. Jensen ◽  
...  
Keyword(s):  
Absorption Spectrum ◽  
Infrared Absorption Spectrum ◽  
Thin Plates ◽  
New Mineral ◽  
Unit Cell Parameters ◽  
X Ray ◽  
Cell Parameters ◽  
Pale Yellow ◽  
Orange Yellow ◽  
New Mineral Species

AbstractLeisingite, ideally Cu(Mg,Cu,Fe,Zn)2Te6+O6·6H2O, is hexagonal, P3 (143), with unit-cell parameters refined from powder data: a = 5.305(1), c = 9.693(6) Å, V = 236.2(2) Å3, c/a = 1.8271, Z = 1. The strongest six reflections of the X-ray powder-diffraction pattern [d in Å (I) (hkl)] are: 9.70 (100) (001), 4.834 (80) (002), 4.604 (60) (100), 2.655 (60) (110), 2.556 (70) (111) and 2.326 (70) (112). The mineral is found on the dumps of the Centennial Eureka mine, Juab County, Utah U.S.A. where it occurs as isolated, or rarely as clusters of, hexagonal-shaped very thin plates or foliated masses in small vugs of crumbly to drusy white to colourless quartz. Associated minerals are jensenite, cesbronite and hematite. Individual crystals are subhedral to euhedral and average less than 0.1 mm in size. Cleavage {001} perfect. Forms are: {001} major; {100}, {110} minute. The mineral is transparent to somewhat translucent, pale yellow to pale orange-yellow, with a pale yellow streak and an uneven fracture. Leisingite is vitreous with a somewhat satiny to frosted appearance, brittle to somewhat flexible and nonfluorescent; H(Mohs) 3–4; D(calc.) 3.41 for the idealized formula; uniaxial negative, ω = 1.803(3), ɛ = 1.581 (calc.). Averaged electron-microprobe analyses yielded CuO 24.71, FeO 6.86, MgO 6.19, ZnO 0.45, TeO3 36.94, H2O (calc.) [21.55], total [96.70] wt.%, leading to the empirical formula based on O = 12. The infrared absorption spectrum shows definite bands for structural H2O with an O-H stretching frequency centered at 3253 cm−1 and a H-O-H flexing frequency centered at 1670 cm−l. The mineral name honours Joseph F. Leising, Reno, Nevada, who helped collect the discovery specimens.

Wesselsite, SrCu[Si4O10], a further new gillespite-group mineral from the Kalahari Manganese Field, South Africa

1996 ◽  
Vol 60 (402) ◽  
pp. 795-798 ◽  
Author(s):  
G. Giester ◽  
B. Rieck
Keyword(s):  
South Africa ◽  
New Mineral ◽  
Solid Solution Series ◽  
Blue Colour ◽  
Unit Cell Parameters ◽  
Calculated Density ◽  
Light Blue ◽  
Cell Parameters ◽  
New Mineral Species ◽  
Perfect Cleavage

AbstractWesselsite, SrCu[Si4O10], is a new mineral species from the Wessels mine, Kalahari Manganese Field, South Africa, and it belongs to the gillespite group. Wesselsite is tetragonal, space group P4/ncc; the unit cell parameters, refined from Gandolfi film data, are a = 7.366(1), c = 15.574(3) Å V = 845.01 Å3. The strongest lines are (dobs/lobs/hkl) (7.79/35/002), (4.33/20/112), (3.89/20/004), (3.44/40/104), (3.33/100/202), (3.12/55/114), (3.03/50/212), (2.68/25/204), (2.61/30/220) and (2.32/30/116). Wesselsite is associated with hennomartinite, embedded in a matrix of sugilite, xonotlite, quartz and pectolite. Microprobe analyses of 111 samples show that it is the end-member of a solid solution series with effenbergerite, BaCu[Si4O10], with substitutions of Sr by Ba up to 50 mol.%. Wesselsite forms tiny subhedral plates in sizes not exceeding 50 × 50 × 5 µm, arranged in clusters of up to 200 µm. It shows a perfect cleavage parallel to {001}, has blue colour, white to light blue streak, and is uniaxial negative with ω = 1.630(2), ε = 1.590(5), strongly pleochroic from blue (ω) to pale blue (ε). The calculated density is 3.32 g cm−3, the measured density is 3.2(1) g cm−3.

scholarly journals Purification, crystallization and preliminary X-ray crystallographic studies of Drep2 CIDE domain

2014 ◽  
Vol 70 (10) ◽  
pp. 1414-1417 ◽  
Author(s):  
Seung Mi Lee ◽  
Hyun Ho Park
Keyword(s):  
Fruit Fly ◽  
Diffusion Method ◽  
Amino Acid Residues ◽  
X Ray Diffraction ◽  
Hanging Drop ◽  
Unit Cell Parameters ◽  
Orthorhombic Space Group ◽  
X Ray ◽  
Cell Parameters ◽  
Protein Protein Interaction

Drep2 is a novel nuclease from the fruit fly that might have a similar function in apoptosis to DFF40 and DFF45, which are primary players in apoptotic DNA fragmentation. Drep2 contains a conserved CIDE domain of ∼90 amino-acid residues that is involved in protein–protein interaction. In this study, the Drep2 CIDE domain was purified and crystallized by the hanging-drop vapour-diffusion method. X-ray diffraction data were then collected to a resolution of 2.3 Å. The crystals were found to belong to the orthorhombic space groupP212121, with unit-cell parametersa= 50.28,b= 88.70,c= 113.37 Å.

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