scholarly journals Mapping of the Retrotransposable Elements Rex1 and Rex3 in Chromosomes of Eigenmannia (Teleostei, Gymnotiformes, Sternopygidae)

2015 ◽  
Vol 146 (4) ◽  
pp. 319-324 ◽  
Author(s):  
Viviani F. de Sene ◽  
José C. Pansonato-Alves ◽  
Daniela C. Ferreira ◽  
Ricardo Utsunomia ◽  
Claudio Oliveira ◽  
...  
Keyword(s):  
Transposable Elements ◽  
X Chromosome ◽  
Physical Mapping ◽  
Sex Chromosomes ◽  
Differentiation Process ◽  
Retrotransposable Elements ◽  
Fish Group ◽  
Small Clusters ◽  
Eukaryote Genome

Transposable elements constitute a remarkable fraction of the eukaryote genome and show particular capacity to move and insert in specific regions of the genome. This study identified the retrotransposable elements Rex1 and Rex3 in the genomes of 6 cytotypes of Eigenmannia. The sequences were isolated by PCR, sequenced and physically mapped in the chromosomes of these cytotypes, aiming to investigate the organization and distribution of these elements in this fish group, mainly in the sex chromosomes. The FISH physical mapping revealed that both Rex1 and Rex3 elements are dispersed in small clusters throughout the chromosomes of all cytotypes analyzed. However, conspicuous blocks occur in several samples, including an accentuated accumulation of the Rex3 element in X1 and X2 chromosomes of Eigenmannia sp. 2 and in the X chromosome of E. virescens. The accumulations are coincident with heterochromatin-rich regions, suggesting that Rex3 played a role in the differentiation process of the sex chromosomes.

scholarly journals Bisection of the X chromosome disrupts the initiation of chromosome silencing during meiosis in Caenorhabditis elegans

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Yisrael Rappaport ◽  
Hanna Achache ◽  
Roni Falk ◽  
Omer Murik ◽  
Oren Ram ◽  
...  
Keyword(s):  
Caenorhabditis Elegans ◽  
Rna Polymerase Ii ◽  
X Chromosome ◽  
Sex Chromosomes ◽  
Sex Chromosome ◽  
Transcription Analysis ◽  
X Chromosomes ◽  
Unique Character ◽  
Active Transcription ◽  
Heterogametic Sex

AbstractDuring meiosis, gene expression is silenced in aberrantly unsynapsed chromatin and in heterogametic sex chromosomes. Initiation of sex chromosome silencing is disrupted in meiocytes with sex chromosome-autosome translocations. To determine whether this is due to aberrant synapsis or loss of continuity of sex chromosomes, we engineered Caenorhabditis elegans nematodes with non-translocated, bisected X chromosomes. In early meiocytes of mutant males and hermaphrodites, X segments are enriched with euchromatin assembly markers and active RNA polymerase II staining, indicating active transcription. Analysis of RNA-seq data showed that genes from the X chromosome are upregulated in gonads of mutant worms. Contrary to previous models, which predicted that any unsynapsed chromatin is silenced during meiosis, our data indicate that unsynapsed X segments are transcribed. Therefore, our results suggest that sex chromosome chromatin has a unique character that facilitates its meiotic expression when its continuity is lost, regardless of whether or not it is synapsed.

CHROMOSOMES AND DNA OF MICROTUS II. CONFIRMATION OF DELETION OF CONSTITUTIVE HETEROCHROMATIN IN M. AGRESTIS CELLS IN VITRO

1977 ◽  
Vol 19 (3) ◽  
pp. 537-541 ◽  
Author(s):  
J. E. K. Cooper
Keyword(s):  
Somatic Cell ◽  
Cell Line ◽  
Cell Lines ◽  
X Chromosome ◽  
Sex Chromosomes ◽  
Constitutive Heterochromatin ◽  
The Other ◽  
Microtus Agrestis ◽  
C Banding

The distribution of constitutive heterochromatin has been examined by C-banding in two somatic cell lines, grown in vitro, from a female Microtus agrestis. One line retains one intact X chromosome together with the short arm of the other X chromosome, while the other cell line retains only the short arm of one X chromosome. Thus, each cell line has lost substantial amounts of heterochromatin from the sex chromosomes, but this material has been deleted from the cells, and not translocated to other chromosomes. Nonetheless, both cell lines continue to propagate well in vitro.

scholarly journals Restricted X chromosome introgression and support for Haldane's rule in hybridizing damselflies

2021 ◽  
Author(s):  
Janne Swaegers ◽  
Rosa Ana Sanchez-Guillen ◽  
Pallavi Chauhan ◽  
Maren Wellenreuther ◽  
Bengt Hansson
Keyword(s):  
X Chromosome ◽  
Sex Chromosomes ◽  
Hybrid Zones ◽  
Haldane’S Rule ◽  
Haldane's Rule ◽  
Genome Wide ◽  
Determination System ◽  
Heterogametic Sex ◽  
Sex Determination System ◽  
Genomic Introgression

Contemporary hybrid zones act as natural laboratories for the investigation of species boundaries and allow to shed light on the little understood roles of sex chromosomes in species divergence. Sex chromosomes are considered to function as a hotspot of genetic divergence between species; indicated by less genomic introgression compared to autosomes during hybridisation. Moreover, they are thought to contribute to Haldane's rule which states that hybrids of the heterogametic sex are more likely to be inviable or sterile. To test these hypotheses, we used contemporary hybrid zones of Ischnura elegans, a damselfly species that has been expanding its range into the northern and western regions of Spain, leading to chronic hybridization with its sister species Ischnura graellsii. We analysed genome-wide SNPs in the Spanish I. elegans and I. graellsii hybrid zone and found (i) that the X chromosome shows less genomic introgression compared to autosomes and (ii) that males are underrepresented among admixed individuals as predicted by Haldane's rule. This is the first study in Odonata that suggests a role of the X chromosome in reproductive isolation. Moreover, our data adds to the few studies on species with X0 sex determination system and contradicts the hypothesis that the absence of a Y chromosome causes exceptions to Haldane's rule.

scholarly journals A Syntenic Region Conserved from Fish to Mammalian X Chromosome

2014 ◽  
Vol 2014 ◽  
pp. 1-10
Author(s):  
Guijun Guan ◽  
Meisheng Yi ◽  
Tohru Kobayashi ◽  
Yunhan Hong ◽  
Yoshitaka Nagahama
Keyword(s):  
X Chromosome ◽  
Sex Chromosomes ◽  
Random Amplified Polymorphic Dna ◽  
Comparative Genomic ◽  
X Chromosomes ◽  
Ancestral Origin ◽  
Dna Contents ◽  
Determining Factors ◽  
Unpaired Region ◽  
Syntenic Segment

Sex chromosomes bearing the sex-determining gene initiate development along the male or female pathway, no matter which sex is determined by XY male or ZW female heterogamety. Sex chromosomes originate from ancient autosomes but evolved rapidly after the acquisition of sex-determining factors which are highly divergent between species. In the heterogametic male system (XY system), the X chromosome is relatively evolutionary silent and maintains most of its ancestral genes, in contrast to its Y counterpart that has evolved rapidly and degenerated. Sex in a teleost fish, the Nile tilapia (Oreochromis niloticus), is determined genetically via an XY system, in which an unpaired region is present in the largest chromosome pair. We defined the differences in DNA contents present in this chromosome with a two-color comparative genomic hybridization (CGH) and the random amplified polymorphic DNA (RAPD) approach in XY males. We further identified a syntenic segment within this region that is well conserved in several teleosts. Through comparative genome analysis, this syntenic segment was also shown to be present in mammalian X chromosomes, suggesting a common ancestral origin of vertebrate sex chromosomes.

Genetic Content of the Neo-Sex Chromosomes in Ctenonotus and Norops (Squamata, Dactyloidae) and Degeneration of the Y Chromosome as Revealed by High-Throughput Sequencing of Individual Chromosomes

2019 ◽  
Vol 157 (1-2) ◽  
pp. 115-122 ◽  
Author(s):  
Artem P. Lisachov ◽  
Alexey I. Makunin ◽  
Massimo Giovannotti ◽  
Jorge C. Pereira ◽  
Anna S. Druzhkova ◽  
...  
Keyword(s):  
Y Chromosome ◽  
X Chromosome ◽  
High Throughput ◽  
Sex Chromosomes ◽  
High Throughput Sequencing ◽  
Anolis Carolinensis ◽  
Pseudoautosomal Region ◽  
Central Component ◽  
Similar System ◽  
Divergence Estimates

Pleurodont lizards are characterized by an ancient system of sex chromosomes. Along with stability of the central component of the system (homologous to the X chromosome of Anolis carolinensis [Dactyloidae], ACAX), in some genera the ancestral sex chromosomes are fused with microautosomes, forming neo-sex chromosomes. The genus Ctenonotus (Dactyloidae) is characterized by multiple X1X1X2X2/X1X2Y sex chromosomes. According to cytogenetic data, the large neo-Y chromosome is formed by fusion of the ancestral Y chromosome with 2 microautosomes (homologous to ACA10 or ACA11 and ACA12), the X1 chromosome is formed by fusion of the ancestral X chromosome with the autosome homologous to ACA10 or ACA11, and the X2 chromosome is homologous to autosome ACA12. To determine more precisely the content and evolution of the Ctenonotus sex chromosomes, we sequenced flow-sorted chromosomes (both sex chromosomes and microautosomes as control) of 2 species with a similar system: C. pogus and C. sabanus. Our results indicate that the translocated part of the X1 is homologous to ACA11, X2 is homologous to ACA12, and the Y contains segments homologous to both ACA11 and ACA12. Molecular divergence estimates suggest that the ancestral X-derived part has completely degenerated in the Y of Ctenonotus, similar to the degeneration of the Norops sagrei Y chromosome (Dactyloidae). The newly added regions show loss of DNA content, but without degeneration of the conserved regions. We hypothesize that the translocation of autosomal blocks onto sex chromosomes facilitated rapid degeneration of the pseudoautosomal region on the ancestral Y.

scholarly journals Studies on Metatherian Sex Chromosomes. IX. Sex Chromosomes of the Greater Glider (Marsupialia : Petauridae)

1979 ◽  
Vol 32 (3) ◽  
pp. 375 ◽  
Author(s):  
JD Murray ◽  
GM McKay ◽  
GB Sharman
Keyword(s):  
X Chromosome ◽  
Sex Chromosomes ◽  
National Park ◽  
Secondary Constriction ◽  
X Chromosomes ◽  
Cultured Fibroblasts ◽  
Multiple Sex Chromosomes ◽  
Eastern Australia ◽  
Xy Bivalent ◽  
Secondary Constrictions

The greater glider, currently but incorrectly known as Schoinobates vo/ans, is widely distributed in forested regions in eastern Australia. All animals studied from six different localities had 20 autosomes but there were four chromosomally distinct populations. At Royal National Park, N.S.W., all female greater gliders studied had 22 chromosomes including two large submetacentric X chromosomes with subterminal secondary constrictions in their longer arms. This form of X chromosome occurred also at Bondo State Forest, Myall Lakes and Coff's Harbour, N.S.W., and at Eidsvold, Qld. At Coomooboolaroo, Qld, the X chromosome was also a large submetacentric but a secondary constriction occurred in the shorter arm. Two chromosomally distinct types apparently occur in Royal National Park, one with XY m,ales as in all other populations, and one with XY1Y2 males. Y or Yb but not Y 2, chromosomes were eliminated from the bone marrow in all populations but were present in spermatogonia, primary sperrnatocytes and cultured fibroblasts. Animals from Bondo State Forest had three or more acrocentric or metacentric supernumerary chromosomes. [Other keywords: C-banding, eytotaxonomy, multiple sex chromosomes, XY bivalent.]

Genetic and Physical Mapping of the Bovine X Chromosome

Genomics ◽  
1996 ◽  
Vol 32 (2) ◽  
pp. 245-252 ◽  
Author(s):  
Chen Chen Yeh ◽  
J.F. Taylor ◽  
D.S. Gallagher ◽  
J.O. Sanders ◽  
J.W. Turner ◽  
...  
Keyword(s):  
X Chromosome ◽  
Physical Mapping ◽  
Genetic And Physical Mapping

scholarly journals Live Cell Imaging of the Nascent Inactive X Chromosome during the Early Differentiation Process of Naive ES Cells towards Epiblast Stem Cells

PLoS ONE ◽  
2014 ◽  
Vol 9 (12) ◽  
pp. e116109 ◽  
Author(s):  
Aurélia Guyochin ◽  
Sylvain Maenner ◽  
Erin Tsi-Jia Chu ◽  
Asma Hentati ◽  
Mikael Attia ◽  
...  
Keyword(s):  
Stem Cells ◽  
X Chromosome ◽  
Live Cell Imaging ◽  
Cell Imaging ◽  
Es Cells ◽  
Live Cell ◽  
Differentiation Process ◽  
Early Differentiation ◽  
Epiblast Stem Cells ◽  
Inactive X Chromosome
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