The site of 5S RNA genes in human chromosome 1

1975 ◽  
Vol 15 (1) ◽  
pp. 50-54 ◽  
Author(s):  
K.C. Atwood ◽  
M.T. Yu ◽  
L.D. Johnson ◽  
A.S. Henderson
1975 ◽  
Vol 14 (3-6) ◽  
pp. 434-438 ◽  
Author(s):  
D.M. Steffensen ◽  
W. Prensky ◽  
D. Mutton ◽  
J.L. Hamerton
Keyword(s):  
5S Rna ◽  

1983 ◽  
Vol 3 (12) ◽  
pp. 2211-2220
Author(s):  
E Lund ◽  
C Bostock ◽  
M Robertson ◽  
S Christie ◽  
J L Mitchen ◽  
...  

The majority, and perhaps all, of the genes for human U1 small nuclear RNA (U1 RNA) were shown to be located on the short arm of human chromosome 1. These genes were mapped by Southern blot analysis of DNA from rodent-human somatic cell hybrids, using the 5' region of a human U1 RNA gene as a human-specific probe. This probe hybridized to DNA fragments present only in digests of total human DNA or to the DNAs of cell lines which contained human chromosome 1. The major families of human U1 RNA genes were identified, but some human genes may have gone undetected. Also, the presence of a few U1 RNA genes on human chromosome 19 could not be ruled out. In spite of the lack of extensive 5'-flanking-region homology between the human and mouse U1 RNA genes, the genes of both species were efficiently transcribed in the hybrid cells, and the U1 RNAs of both species were incorporated into specific ribonucleoprotein particles.


Nature ◽  
1974 ◽  
Vol 252 (5485) ◽  
pp. 741-743 ◽  
Author(s):  
DALE M. STEFFENSEN ◽  
P. DUFFEY ◽  
W. PRENSKY

1983 ◽  
Vol 3 (12) ◽  
pp. 2211-2220 ◽  
Author(s):  
E Lund ◽  
C Bostock ◽  
M Robertson ◽  
S Christie ◽  
J L Mitchen ◽  
...  

The majority, and perhaps all, of the genes for human U1 small nuclear RNA (U1 RNA) were shown to be located on the short arm of human chromosome 1. These genes were mapped by Southern blot analysis of DNA from rodent-human somatic cell hybrids, using the 5' region of a human U1 RNA gene as a human-specific probe. This probe hybridized to DNA fragments present only in digests of total human DNA or to the DNAs of cell lines which contained human chromosome 1. The major families of human U1 RNA genes were identified, but some human genes may have gone undetected. Also, the presence of a few U1 RNA genes on human chromosome 19 could not be ruled out. In spite of the lack of extensive 5'-flanking-region homology between the human and mouse U1 RNA genes, the genes of both species were efficiently transcribed in the hybrid cells, and the U1 RNAs of both species were incorporated into specific ribonucleoprotein particles.


2002 ◽  
Vol 33 (2) ◽  
pp. 91-96 ◽  
Author(s):  
H. S. Sun ◽  
C. K. Tuggle ◽  
A. Goureau ◽  
C. J. Fitzsimmons ◽  
P. Pinton ◽  
...  

Nature ◽  
2006 ◽  
Vol 443 (7114) ◽  
pp. 1013-1013
Author(s):  
S. G. Gregory ◽  
K. F. Barlow ◽  
K. E. McLay ◽  
R. Kaul ◽  
D. Swarbreck ◽  
...  

1990 ◽  
Vol 172 (1) ◽  
pp. 263-272 ◽  
Author(s):  
M L Watson ◽  
S F Kingsmore ◽  
G I Johnston ◽  
M H Siegelman ◽  
M M Le Beau ◽  
...  

A structurally and functionally related group of genes, lymph node homing receptor (LHR), granule membrane protein 140 (GMP-140), and endothelial leukocyte adhesion molecule 1 (ELAM-1) are shown to constitute a gene cluster on mouse and human chromosome 1. In situ hybridization mapped GMP-140 to human chromosome 1 bands 21-24 consistent with chromosomal localization of LHR. Gene linkage analysis in the mouse indicated that these genes and serum coagulation factor V (FV) all map to a region of distal mouse chromosome 1 that is syntenic with human chromosome 1, with no crossovers identified between these four genes in 428 meiotic events. Moreover, long range restriction site mapping demonstrated that these genes map to within 300 kb in both the human and mouse genomes. These data suggest that LHR, ELAM-1, and GMP-140 comprise an adhesion protein family, the selectins, that arose by multiple gene duplication events before divergence of mouse and human. Furthermore, the location of these genes on mouse and human chromosome 1 is consistent with a close evolutionary relationship to the complement receptor-related genes, which also are positioned on the same chromosomes in both species and with which these genes share a region of sequence homology. These data characterize the organization of a genomic region that may be critical for intercellular communication within the immune system.


1991 ◽  
Vol 10 (8) ◽  
pp. 559-569 ◽  
Author(s):  
ZHIGANG HE ◽  
RITSU YAMAMOTO ◽  
EMMA E. FURTH ◽  
LAURA J. SCHANTZ ◽  
SUSAN L. NAYLOR ◽  
...  

1983 ◽  
Vol 3 (4) ◽  
pp. 720-730
Author(s):  
D Young ◽  
D Carroll

The chromatin structure of the oocyte-type 5S RNA genes in Xenopus laevis was investigated. Blot hybridization analysis of DNA from micrococcal nuclease digests of erythrocyte nuclei showed that 5S DNA has the same average nucleosome repeat length, 192 +/- 4 base pairs, as two Xenopus satellite DNAs and bulk erythrocyte chromatin. The positions of nuclease-sensitive regions in the 5S DNA repeats of purified DNA and chromatin from erythrocytes were mapped by using an indirect end-labeling technique. Although most of the sites cleaved in purified DNA were also cleaved in chromatin, the patterns of intensities were strikingly different in the two cases. In 5S chromatin, three nuclease-sensitive regions were spaced approximately a nucleosome length apart, suggesting a single, regular arrangement of nucleosomes on most of the 5S DNA repeats. The observed nucleosome locations are discussed with respect to nucleotide sequences known to be important for expression of 5S RNA. Because the preferred locations appear to be reestablished in each repeating unit, despite spacer length heterogeneity, we suggest that the regular chromatin structure reflects the presence of a sequence-specific DNA-binding component on inactive 5S RNA genes.


Nature ◽  
1978 ◽  
Vol 271 (5642) ◽  
pp. 205-206 ◽  
Author(s):  
Peter Ford
Keyword(s):  
5S Rna ◽  

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