scholarly journals Augmentation in Healthcare: Augmented Biosignal Using Deep Learning and Tensor Representation

2021 ◽  
Vol 2021 ◽  
pp. 1-9
Author(s):  
Marwa Ibrahim ◽  
Mohammad Wedyan ◽  
Ryan Alturki ◽  
Muazzam A. Khan ◽  
Adel Al-Jumaily
Keyword(s):  
Feature Extraction ◽  
Deep Learning ◽  
Data Sets ◽  
Healthcare Applications ◽  
Raw Data ◽  
Multistage Model ◽  
Testing Dataset ◽  
Proposed Model ◽  
Health Practitioners ◽  
Extraction Algorithm

In healthcare applications, deep learning is a highly valuable tool. It extracts features from raw data to save time and effort for health practitioners. A deep learning model is capable of learning and extracting the features from raw data by itself without any external intervention. On the other hand, shallow learning feature extraction techniques depend on user experience in selecting a powerful feature extraction algorithm. In this article, we proposed a multistage model that is based on the spectrogram of biosignal. The proposed model provides an appropriate representation of the input raw biosignal that boosts the accuracy of training and testing dataset. In the next stage, smaller datasets are augmented as larger data sets to enhance the accuracy of the classification for biosignal datasets. After that, the augmented dataset is represented in the TensorFlow that provides more services and functionalities, which give more flexibility. The proposed model was compared with different approaches. The results show that the proposed approach is better in terms of testing and training accuracy.

Human Activity Recognition using Fourier Transform Inspired Deep Learning Combination Model

2019 ◽  
Vol 9 (1) ◽  
pp. 16-31
Author(s):  
Kyungkoo Jun
Keyword(s):  
Fourier Transform ◽  
Deep Learning ◽  
Short Term Memory ◽  
Window Size ◽  
Sensor Data ◽  
Data Sets ◽  
Data Set ◽  
Proposed Model ◽  
Testing Data ◽  
Labeling Scheme

Background & Objective: This paper proposes a Fourier transform inspired method to classify human activities from time series sensor data. Methods: Our method begins by decomposing 1D input signal into 2D patterns, which is motivated by the Fourier conversion. The decomposition is helped by Long Short-Term Memory (LSTM) which captures the temporal dependency from the signal and then produces encoded sequences. The sequences, once arranged into the 2D array, can represent the fingerprints of the signals. The benefit of such transformation is that we can exploit the recent advances of the deep learning models for the image classification such as Convolutional Neural Network (CNN). Results: The proposed model, as a result, is the combination of LSTM and CNN. We evaluate the model over two data sets. For the first data set, which is more standardized than the other, our model outperforms previous works or at least equal. In the case of the second data set, we devise the schemes to generate training and testing data by changing the parameters of the window size, the sliding size, and the labeling scheme. Conclusion: The evaluation results show that the accuracy is over 95% for some cases. We also analyze the effect of the parameters on the performance.

Multi Disease-Prediction Framework Using Hybrid Deep Learning: An Optimal Prediction Model (Preprint)

2020 ◽  
Author(s):  
Anusha Ampavathi ◽  
Vijaya Saradhi T
Keyword(s):  
Feature Extraction ◽  
Big Data ◽  
Deep Learning ◽  
Weight Function ◽  
Optimization Algorithm ◽  
Large Scale ◽  
Heuristic Algorithms ◽  
Disease Prediction ◽  
Health Care Decisions ◽  
Proposed Model

UNSTRUCTURED Big data and its approaches are generally helpful for healthcare and biomedical sectors for predicting the disease. For trivial symptoms, the difficulty is to meet the doctors at any time in the hospital. Thus, big data provides essential data regarding the diseases on the basis of the patient’s symptoms. For several medical organizations, disease prediction is important for making the best feasible health care decisions. Conversely, the conventional medical care model offers input as structured that requires more accurate and consistent prediction. This paper is planned to develop the multi-disease prediction using the improvised deep learning concept. Here, the different datasets pertain to “Diabetes, Hepatitis, lung cancer, liver tumor, heart disease, Parkinson’s disease, and Alzheimer’s disease”, from the benchmark UCI repository is gathered for conducting the experiment. The proposed model involves three phases (a) Data normalization (b) Weighted normalized feature extraction, and (c) prediction. Initially, the dataset is normalized in order to make the attribute's range at a certain level. Further, weighted feature extraction is performed, in which a weight function is multiplied with each attribute value for making large scale deviation. Here, the weight function is optimized using the combination of two meta-heuristic algorithms termed as Jaya Algorithm-based Multi-Verse Optimization algorithm (JA-MVO). The optimally extracted features are subjected to the hybrid deep learning algorithms like “Deep Belief Network (DBN) and Recurrent Neural Network (RNN)”. As a modification to hybrid deep learning architecture, the weight of both DBN and RNN is optimized using the same hybrid optimization algorithm. Further, the comparative evaluation of the proposed prediction over the existing models certifies its effectiveness through various performance measures.

Automatic Segmentation and Classification of COVID-19 CT Image Using Deep Learning and Multi-Scale Recurrent Neural Network Based Classifier

2021 ◽  
Vol 11 (10) ◽  
pp. 2618-2625
Author(s):  
R. T. Subhalakshmi ◽  
S. Appavu Alias Balamurugan ◽  
S. Sasikala
Keyword(s):  
Neural Network ◽  
Feature Extraction ◽  
Deep Learning ◽  
Recurrent Neural Network ◽  
Automatic Segmentation ◽  
Ct Images ◽  
Superior Performance ◽  
Multi Scale ◽  
Proposed Model ◽  
Class Labels

In recent times, the COVID-19 epidemic turn out to be increased in an extreme manner, by the accessibility of an inadequate amount of rapid testing kits. Consequently, it is essential to develop the automated techniques for Covid-19 detection to recognize the existence of disease from the radiological images. The most ordinary symptoms of COVID-19 are sore throat, fever, and dry cough. Symptoms are able to progress to a rigorous type of pneumonia with serious impediment. As medical imaging is not recommended currently in Canada for crucial COVID-19 diagnosis, systems of computer-aided diagnosis might aid in early COVID-19 abnormalities detection and help out to observe the disease progression, reduce mortality rates potentially. In this approach, a deep learning based design for feature extraction and classification is employed for automatic COVID-19 diagnosis from computed tomography (CT) images. The proposed model operates on three main processes based pre-processing, feature extraction, and classification. The proposed design incorporates the fusion of deep features using GoogLe Net models. Finally, Multi-scale Recurrent Neural network (RNN) based classifier is applied for identifying and classifying the test CT images into distinct class labels. The experimental validation of the proposed model takes place using open-source COVID-CT dataset, which comprises a total of 760 CT images. The experimental outcome defined the superior performance with the maximum sensitivity, specificity, and accuracy.

An Investigation Into the Efficacy of Deep Learning Tools for Big Data Analysis in Health Care

2020 ◽  
pp. 1826-1838
Author(s):  
Rojalina Priyadarshini ◽  
Rabindra K. Barik ◽  
Chhabi Panigrahi ◽  
Harishchandra Dubey ◽  
Brojo Kishore Mishra
Keyword(s):  
Big Data ◽  
Deep Learning ◽  
Large Data ◽  
Big Data Analysis ◽  
Optimization Techniques ◽  
Data Sets ◽  
Learning Tools ◽  
Healthcare Applications ◽  
Proper Training ◽  
Future Prediction

This article describes how machine learning (ML) algorithms are very useful for analysis of data and finding some meaningful information out of them, which could be used in various other applications. In the last few years, an explosive growth has been seen in the dimension and structure of data. There are several difficulties faced by conventional ML algorithms while dealing with such highly voluminous and unstructured big data. The modern ML tools are designed and used to deal with all sorts of complexities of data. Deep learning (DL) is one of the modern ML tools which are commonly used to find the hidden structure and cohesion among these large data sets by giving proper training in parallel platforms with intelligent optimization techniques to further analyze and interpret the data for future prediction and classification. This article focuses on the use of DL tools and software which are used in past couple of years in various areas and especially in the area of healthcare applications.

scholarly journals ECOVNet: a highly effective ensemble based deep learning model for detecting COVID-19

2021 ◽  
Vol 7 ◽  
pp. e551
Author(s):  
Nihad Karim Chowdhury ◽  
Muhammad Ashad Kabir ◽  
Md. Muhtadir Rahman ◽  
Noortaz Rezoana
Keyword(s):  
Deep Learning ◽  
Detection System ◽  
Learning Model ◽  
Classification Performance ◽  
Data Sets ◽  
X Rays ◽  
Proposed Model ◽  
Highly Effective ◽  
Chest X Ray ◽  
Deep Learning Model

The goal of this research is to develop and implement a highly effective deep learning model for detecting COVID-19. To achieve this goal, in this paper, we propose an ensemble of Convolutional Neural Network (CNN) based on EfficientNet, named ECOVNet, to detect COVID-19 from chest X-rays. To make the proposed model more robust, we have used one of the largest open-access chest X-ray data sets named COVIDx containing three classes—COVID-19, normal, and pneumonia. For feature extraction, we have applied an effective CNN structure, namely EfficientNet, with ImageNet pre-training weights. The generated features are transferred into custom fine-tuned top layers followed by a set of model snapshots. The predictions of the model snapshots (which are created during a single training) are consolidated through two ensemble strategies, i.e., hard ensemble and soft ensemble, to enhance classification performance. In addition, a visualization technique is incorporated to highlight areas that distinguish classes, thereby enhancing the understanding of primal components related to COVID-19. The results of our empirical evaluations show that the proposed ECOVNet model outperforms the state-of-the-art approaches and significantly improves detection performance with 100% recall for COVID-19 and overall accuracy of 96.07%. We believe that ECOVNet can enhance the detection of COVID-19 disease, and thus, underpin a fully automated and efficacious COVID-19 detection system.

scholarly journals Towards Mapping Images to Text Using Deep-Learning Architectures

Mathematics ◽  
2020 ◽  
Vol 8 (9) ◽  
pp. 1606
Author(s):  
Daniela Onita ◽  
Adriana Birlutiu ◽  
Liviu P. Dinu
Keyword(s):  
Neural Network ◽  
Feature Extraction ◽  
Deep Learning ◽  
Image Features ◽  
The Other ◽  
Data Sets ◽  
Network Architectures ◽  
Learning Approaches ◽  
Data Set ◽  
Pixel Value

Images and text represent types of content that are used together for conveying a message. The process of mapping images to text can provide very useful information and can be included in many applications from the medical domain, applications for blind people, social networking, etc. In this paper, we investigate an approach for mapping images to text using a Kernel Ridge Regression model. We considered two types of features: simple RGB pixel-value features and image features extracted with deep-learning approaches. We investigated several neural network architectures for image feature extraction: VGG16, Inception V3, ResNet50, Xception. The experimental evaluation was performed on three data sets from different domains. The texts associated with images represent objective descriptions for two of the three data sets and subjective descriptions for the other data set. The experimental results show that the more complex deep-learning approaches that were used for feature extraction perform better than simple RGB pixel-value approaches. Moreover, the ResNet50 network architecture performs best in comparison to the other three deep network architectures considered for extracting image features. The model error obtained using the ResNet50 network is less by approx. 0.30 than other neural network architectures. We extracted natural language descriptors of images and we made a comparison between original and generated descriptive words. Furthermore, we investigated if there is a difference in performance between the type of text associated with the images: subjective or objective. The proposed model generated more similar descriptions to the original ones for the data set containing objective descriptions whose vocabulary is simpler, bigger and clearer.

An Investigation Into the Efficacy of Deep Learning Tools for Big Data Analysis in Health Care

2018 ◽  
Vol 10 (3) ◽  
pp. 1-13 ◽  
Author(s):  
Rojalina Priyadarshini ◽  
Rabindra K. Barik ◽  
Chhabi Panigrahi ◽  
Harishchandra Dubey ◽  
Brojo Kishore Mishra
Keyword(s):  
Big Data ◽  
Deep Learning ◽  
Large Data ◽  
Optimization Techniques ◽  
Large Data Sets ◽  
Data Sets ◽  
Learning Tools ◽  
Healthcare Applications ◽  
Proper Training ◽  
Future Prediction

This article describes how machine learning (ML) algorithms are very useful for analysis of data and finding some meaningful information out of them, which could be used in various other applications. In the last few years, an explosive growth has been seen in the dimension and structure of data. There are several difficulties faced by conventional ML algorithms while dealing with such highly voluminous and unstructured big data. The modern ML tools are designed and used to deal with all sorts of complexities of data. Deep learning (DL) is one of the modern ML tools which are commonly used to find the hidden structure and cohesion among these large data sets by giving proper training in parallel platforms with intelligent optimization techniques to further analyze and interpret the data for future prediction and classification. This article focuses on the use of DL tools and software which are used in past couple of years in various areas and especially in the area of healthcare applications.

scholarly journals Analyzing Large Microbiome Datasets Using Machine Learning and Big Data

2021 ◽  
Vol 1 (3) ◽  
pp. 138-165
Author(s):  
Thomas Krause ◽  
Jyotsna Talreja Wassan ◽  
Paul Mc Kevitt ◽  
Haiying Wang ◽  
Huiru Zheng ◽  
...  
Keyword(s):  
Machine Learning ◽  
Big Data ◽  
Deep Learning ◽  
Machine Learning Algorithms ◽  
Metagenomic Data ◽  
Data Sets ◽  
Raw Data ◽  
Public And Private ◽  
Rumen Microbiome

Metagenomics promises to provide new valuable insights into the role of microbiomes in eukaryotic hosts such as humans. Due to the decreasing costs for sequencing, public and private repositories for human metagenomic datasets are growing fast. Metagenomic datasets can contain terabytes of raw data, which is a challenge for data processing but also an opportunity for advanced machine learning methods like deep learning that require large datasets. However, in contrast to classical machine learning algorithms, the use of deep learning in metagenomics is still an exception. Regardless of the algorithms used, they are usually not applied to raw data but require several preprocessing steps. Performing this preprocessing and the actual analysis in an automated, reproducible, and scalable way is another challenge. This and other challenges can be addressed by adjusting known big data methods and architectures to the needs of microbiome analysis and DNA sequence processing. A conceptual architecture for the use of machine learning and big data on metagenomic data sets was recently presented and initially validated to analyze the rumen microbiome. The same architecture can be used for clinical purposes as is discussed in this paper.

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