scholarly journals Optimizing Biomedical Ontology Alignment through a Compact Multiobjective Particle Swarm Optimization Algorithm Driven by Knee Solution

2020 ◽  
Vol 2020 ◽  
pp. 1-10
Author(s):  
Xingsi Xue ◽  
Xiaojing Wu ◽  
Junfeng Chen

Nowadays, most real-world decision problems consist of two or more incommensurable or conflicting objectives to be optimized simultaneously, so-called multiobjective optimization problems (MOPs). Usually, a decision maker (DM) prefers only a single optimum solution in the Pareto front (PF), and the PF’s knee solution is logically the one if there are no user-specific or problem-specific preferences. In this context, the biomedical ontology matching problem in the Semantic Web (SW) domain is investigated, which can be of help to integrate the biomedical knowledge and facilitate the translational discoveries. Since biomedical ontologies often own large-scale concepts with rich semantic meanings, it is difficult to find a perfect alignment that could meet all DM’s requirements, and usually, the matching process needs to trade-off two conflict objectives, i.e., the alignment’s recall and precision. To this end, in this work, the biomedical ontology matching problem is first defined as a MOP, and then a compact multiobjective particle swarm optimization algorithm driven by knee solution (CMPSO-K) is proposed to address it. In particular, a compact evolutionary mechanism is proposed to efficiently optimize the alignment’s quality, and a max-min approach is used to determine the PF’s knee solution. In the experiment, three biomedical tracks provided by Ontology Alignment Evaluation Initiative (OAEI) are used to test CMPSO-K’s performance. The comparisons with OAEI’s participants and PSO-based matching technique show that CMPSO-K is both effective and efficient.

Author(s):  
Arindam Majumder ◽  
Rajib Ghosh

This study deals with a plant layout where there were ninety predefined locations which have to be inspected by using three multiple robots in such a way that there would not be any collisions between the robots. A heuristic integrated multiobjective particle swarm optimization algorithm (HPSO) is developed for allocating tasks to each robot and planning of path while moving from one task location to another. For optimal path planning of each robot the research utilized A* algorithm. The task allocation for each robot is carried out using a modified multiobjective particle swarm optimization algorithm where the earliest completion time (ECT) inspired technique is used to make the algorithm applicable in multi robot task allocation problems. At the later stage of this study, in order to test the capability of HPSO an instance is solved by the algorithm and is compared with the existing solutions of a genetic algorithm with the A* algorithm. The computational results showed the superiority of the proposed algorithm over existing algorithms.


2017 ◽  
Vol 2017 ◽  
pp. 1-12 ◽  
Author(s):  
Huan Zhang ◽  
Rennong Yang ◽  
Changyue Sun ◽  
Haiyan Han

For the problem of multiaircraft cooperative suppression interference array (MACSIA) against the enemy air defense radar network in electronic warfare mission planning, firstly, the concept of route planning security zone is proposed and the solution to get the minimum width of security zone based on mathematical morphology is put forward. Secondly, the minimum width of security zone and the sum of the distance between each jamming aircraft and the center of radar network are regarded as objective function, and the multiobjective optimization model of MACSIA is built, and then an improved multiobjective particle swarm optimization algorithm is used to solve the model. The decomposition mechanism is adopted and the proportional distribution is used to maintain diversity of the new found nondominated solutions. Finally, the Pareto optimal solutions are analyzed by simulation, and the optimal MACSIA schemes of each jamming aircraft suppression against the enemy air defense radar network are obtained and verify that the built multiobjective optimization model is corrected. It also shows that the improved multiobjective particle swarm optimization algorithm for solving the problem of MACSIA is feasible and effective.


2020 ◽  
Vol 2020 ◽  
pp. 1-26
Author(s):  
Wusi Yang ◽  
Li Chen ◽  
Yi Wang ◽  
Maosheng Zhang

The recently proposed multiobjective particle swarm optimization algorithm based on competition mechanism algorithm cannot effectively deal with many-objective optimization problems, which is characterized by relatively poor convergence and diversity, and long computing runtime. In this paper, a novel multi/many-objective particle swarm optimization algorithm based on competition mechanism is proposed, which maintains population diversity by the maximum and minimum angle between ordinary and extreme individuals. And the recently proposed θ-dominance is adopted to further enhance the performance of the algorithm. The proposed algorithm is evaluated on the standard benchmark problems DTLZ, WFG, and UF1-9 and compared with the four recently proposed multiobjective particle swarm optimization algorithms and four state-of-the-art many-objective evolutionary optimization algorithms. The experimental results indicate that the proposed algorithm has better convergence and diversity, and its performance is superior to other comparative algorithms on most test instances.


2014 ◽  
Vol 687-691 ◽  
pp. 1380-1384
Author(s):  
Jian Jun Zhao ◽  
Wen Jie Zhao

In this paper, we propose a fast multiobjective particle swarm optimization algorithm (called CBR-fMOPSO for short). In the algorithm, a case-based reasoning (CBR) technique is used to retrieve history optimization results and experts’ experience and add them into the population of multiobjective particle swarm optimization algorithm (MOPSO) in dynamic environment. The optimal solutions found by CBR-fMOPSO are used to mend the case library to improve the accuracy of solving based on CBR in next solving. The results from a suit of experiments in electric furnaces show that the proposed algorithm maintains good performances however the environment changes.


2021 ◽  
Vol 2021 ◽  
pp. 1-11
Author(s):  
Hai Zhu ◽  
Xingsi Xue ◽  
Aifeng Geng ◽  
He Ren

In recent years, innovative positioning and mobile communication techniques have been developing to achieve Location-Based Services (LBSs). With the help of sensors, LBS is able to detect and sense the information from the outside world to provide location-related services. To implement the intelligent LBS, it is necessary to develop the Semantic Sensor Web (SSW), which makes use of the sensor ontologies to implement the sensor data interoperability, information sharing, and knowledge fusion among intelligence systems. Due to the subjectivity of sensor ontology engineers, the heterogeneity problem is introduced, which hampers the communications among these sensor ontologies. To address this problem, sensor ontology matching is introduced to establish the corresponding relationship between different sensor terms. Among all ontology matching technologies, Particle Swarm Optimization (PSO) can represent a contributing method to deal with the low-quality ontology alignment problem. For the purpose of further enhancing the quality of matching results, in our work, sensor ontology matching is modeled as the meta-matching problem firstly, and then based on this model, aiming at various similarity measures, a Simulated Annealing PSO (SAPSO) is proposed to optimize their aggregation weights and the threshold. In particular, the approximate evaluation metrics for evaluating quality of alignment without reference are proposed, and a Simulated Annealing (SA) strategy is applied to PSO’s evolving process, which is able to help the algorithm avoid the local optima and enhance the quality of solution. The well-known Ontology Alignment Evaluation Initiative’s benchmark (OAEI’s benchmark) and three real sensor ontologies are used to verify the effectiveness of SAPSO. The experimental results show that SAPSO is able to effectively match the sensor ontologies.


2021 ◽  
Vol 2021 ◽  
pp. 1-9
Author(s):  
Peyman Almasinejad ◽  
Amin Golabpour ◽  
Mohammad Reza Mollakhalili Meybodi ◽  
Kamal Mirzaie ◽  
Ahmad Khosravi

Missing data occurs in all research, especially in medical studies. Missing data is the situation in which a part of research data has not been reported. This will result in the incompatibility of the sample and the population and misguided conclusions. Missing data is usual in research, and the extent of it will determine how misinterpreted the conclusions will be. All methods of parameter estimation and prediction models are based on the assumption that the data are complete. Extensive missing data will result in false predictions and increased bias. In the present study, a novel method has been proposed for the imputation of medical missing data. The method determines what algorithm is suitable for the imputation of missing data. To do so, a multiobjective particle swarm optimization algorithm was used. The algorithm imputes the missing data in a way that if a prediction model is applied to the data, both specificity and sensitivity will be optimized. Our proposed model was evaluated using real data of gastric cancer and acute T-cell leukemia (ATLL). First, the model was then used to impute the missing data. Then, the missing data were imputed using deletion, average, expectation maximization, MICE, and missForest methods. Finally, the prediction model was applied for both imputed datasets. The accuracy of the prediction model for the first and the second imputation methods was 0.5 and 16.5, respectively. The novel imputation method was more accurate than similar algorithms like expectation maximization and MICE.


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