scholarly journals Transforming Retinal Photographs to Entropy Images in Deep Learning to Improve Automated Detection for Diabetic Retinopathy

2018 ◽  
Vol 2018 ◽  
pp. 1-6 ◽  
Author(s):  
Gen-Min Lin ◽  
Mei-Juan Chen ◽  
Chia-Hung Yeh ◽  
Yu-Yang Lin ◽  
Heng-Yu Kuo ◽  
...  
Keyword(s):  
Diabetic Retinopathy ◽  
Deep Learning ◽  
Sensitivity And Specificity ◽  
Block Size ◽  
Detection Accuracy ◽  
Data Sets ◽  
Feature Maps ◽  
Data Set ◽  
Fundus Photographs ◽  
Grade 3

Entropy images, representing the complexity of original fundus photographs, may strengthen the contrast between diabetic retinopathy (DR) lesions and unaffected areas. The aim of this study is to compare the detection performance for severe DR between original fundus photographs and entropy images by deep learning. A sample of 21,123 interpretable fundus photographs obtained from a publicly available data set was expanded to 33,000 images by rotating and flipping. All photographs were transformed into entropy images using block size 9 and downsized to a standard resolution of 100 × 100 pixels. The stages of DR are classified into 5 grades based on the International Clinical Diabetic Retinopathy Disease Severity Scale: Grade 0 (no DR), Grade 1 (mild nonproliferative DR), Grade 2 (moderate nonproliferative DR), Grade 3 (severe nonproliferative DR), and Grade 4 (proliferative DR). Of these 33,000 photographs, 30,000 images were randomly selected as the training set, and the remaining 3,000 images were used as the testing set. Both the original fundus photographs and the entropy images were used as the inputs of convolutional neural network (CNN), and the results of detecting referable DR (Grades 2–4) as the outputs from the two data sets were compared. The detection accuracy, sensitivity, and specificity of using the original fundus photographs data set were 81.80%, 68.36%, 89.87%, respectively, for the entropy images data set, and the figures significantly increased to 86.10%, 73.24%, and 93.81%, respectively (all p values <0.001). The entropy image quantifies the amount of information in the fundus photograph and efficiently accelerates the generating of feature maps in the CNN. The research results draw the conclusion that transformed entropy imaging of fundus photographs can increase the machinery detection accuracy, sensitivity, and specificity of referable DR for the deep learning-based system.

scholarly journals Key Parts of Transmission Line Detection Using Improved YOLO v3

2021 ◽  
Vol 18 (6) ◽  
Author(s):  
Tu Renwei ◽  
Zhu Zhongjie ◽  
Bai Yongqiang ◽  
Gao Ming ◽  
Ge Zhifeng
Keyword(s):  
Transmission Line ◽  
Detection Accuracy ◽  
Data Sets ◽  
Feature Maps ◽  
Data Set ◽  
Detection Model ◽  
The Neural Network ◽  
Low Efficiency ◽  
The One ◽  
Detection Speed

Unmanned Aerial Vehicle (UAV) inspection has become one of main methods for current transmission line inspection, but there are still some shortcomings such as slow detection speed, low efficiency, and inability for low light environment. To address these issues, this paper proposes a deep learning detection model based on You Only Look Once (YOLO) v3. On the one hand, the neural network structure is simplified, that is the three feature maps of YOLO v3 are pruned into two to meet specific detection requirements. Meanwhile, the K-means++ clustering method is used to calculate the anchor value of the data set to improve the detection accuracy. On the other hand, 1000 sets of power tower and insulator data sets are collected, which are inverted and scaled to expand the data set, and are fully optimized by adding different illumination and viewing angles. The experimental results show that this model using improved YOLO v3 can effectively improve the detection accuracy by 6.0%, flops by 8.4%, and the detection speed by about 6.0%.

scholarly journals Research on Network Security Application Based on Deep Learning

CONVERTER ◽  
2021 ◽  
pp. 598-605
Author(s):  
Zhao Jianchao
Keyword(s):  
Deep Learning ◽  
Learning Algorithm ◽  
Rapid Development ◽  
Internet Security ◽  
Detection Accuracy ◽  
Data Sets ◽  
Learning Technology ◽  
Data Set ◽  
Deep Learning Algorithm ◽  
Internet Industry

Behind the rapid development of the Internet industry, Internet security has become a hidden danger. In recent years, the outstanding performance of deep learning in classification and behavior prediction based on massive data makes people begin to study how to use deep learning technology. Therefore, this paper attempts to apply deep learning to intrusion detection to learn and classify network attacks. Aiming at the nsl-kdd data set, this paper first uses the traditional classification methods and several different deep learning algorithms for learning classification. This paper deeply analyzes the correlation among data sets, algorithm characteristics and experimental classification results, and finds out the deep learning algorithm which is relatively good at. Then, a normalized coding algorithm is proposed. The experimental results show that the algorithm can improve the detection accuracy and reduce the false alarm rate.

scholarly journals DNA Methylation Markers for Pan-Cancer Prediction by Deep Learning

Genes ◽  
2019 ◽  
Vol 10 (10) ◽  
pp. 778 ◽  
Author(s):  
Liu ◽  
Liu ◽  
Pan ◽  
Li ◽  
Yang ◽  
...  
Keyword(s):  
Dna Methylation ◽  
Deep Learning ◽  
Sensitivity And Specificity ◽  
Test Data ◽  
Data Sets ◽  
Methylation Data ◽  
Average Sensitivity ◽  
Validation Data ◽  
Data Set ◽  
Cancer Types

For cancer diagnosis, many DNA methylation markers have been identified. However, few studies have tried to identify DNA methylation markers to diagnose diverse cancer types simultaneously, i.e., pan-cancers. In this study, we tried to identify DNA methylation markers to differentiate cancer samples from the respective normal samples in pan-cancers. We collected whole genome methylation data of 27 cancer types containing 10,140 cancer samples and 3386 normal samples, and divided all samples into five data sets, including one training data set, one validation data set and three test data sets. We applied machine learning to identify DNA methylation markers, and specifically, we constructed diagnostic prediction models by deep learning. We identified two categories of markers: 12 CpG markers and 13 promoter markers. Three of 12 CpG markers and four of 13 promoter markers locate at cancer-related genes. With the CpG markers, our model achieved an average sensitivity and specificity on test data sets as 92.8% and 90.1%, respectively. For promoter markers, the average sensitivity and specificity on test data sets were 89.8% and 81.1%, respectively. Furthermore, in cell-free DNA methylation data of 163 prostate cancer samples, the CpG markers achieved the sensitivity as 100%, and the promoter markers achieved 92%. For both marker types, the specificity of normal whole blood was 100%. To conclude, we identified methylation markers to diagnose pan-cancers, which might be applied to liquid biopsy of cancers.

scholarly journals Diabetic Retinopathy detection through integration of Deep Learning classification framework

2017 ◽  
Author(s):  
Alexander Rakhlin
Keyword(s):  
Diabetic Retinopathy ◽  
Deep Learning ◽  
State Of The Art ◽  
Data Sets ◽  
Deep Convolutional Neural Networks ◽  
Data Set ◽  
Diabetic Retinopathy Screening ◽  
Classification Framework ◽  
Ongoing Project ◽  
Retinopathy Screening

AbstractThis document represents a brief account of ongoing project for Diabetic Retinopathy Detection (DRD) through integration of state-of the art Deep Learning methods. We make use of deep Convolutional Neural Networks (CNNs), which have proven revolutionary in multiple fields of computer vision including medical imaging, and we bring their power to the diagnosis of eye fundus images. For training our models we used publicly available Kaggle data set. For testing we used portion of Kaggle data withheld from training and Messidor-2 reference standard. Neither withheld Kaggle images, nor Messidor-2 were used for training. For Messidor-2 we achieved sensitivity 99%, specificity 71%, and AUC 0.97. These results close to recent state-of-the-art models trained on much larger data sets and surpass average results of diabetic retinopathy screening when performed by trained optometrists. With continuous development of our Deep Learning models we expect to further increase the accuracy of the method and expand it to cataract and glaucoma diagnostics.

Human Activity Recognition using Fourier Transform Inspired Deep Learning Combination Model

2019 ◽  
Vol 9 (1) ◽  
pp. 16-31
Author(s):  
Kyungkoo Jun
Keyword(s):  
Fourier Transform ◽  
Deep Learning ◽  
Short Term Memory ◽  
Window Size ◽  
Sensor Data ◽  
Data Sets ◽  
Data Set ◽  
Proposed Model ◽  
Testing Data ◽  
Labeling Scheme

Background & Objective: This paper proposes a Fourier transform inspired method to classify human activities from time series sensor data. Methods: Our method begins by decomposing 1D input signal into 2D patterns, which is motivated by the Fourier conversion. The decomposition is helped by Long Short-Term Memory (LSTM) which captures the temporal dependency from the signal and then produces encoded sequences. The sequences, once arranged into the 2D array, can represent the fingerprints of the signals. The benefit of such transformation is that we can exploit the recent advances of the deep learning models for the image classification such as Convolutional Neural Network (CNN). Results: The proposed model, as a result, is the combination of LSTM and CNN. We evaluate the model over two data sets. For the first data set, which is more standardized than the other, our model outperforms previous works or at least equal. In the case of the second data set, we devise the schemes to generate training and testing data by changing the parameters of the window size, the sliding size, and the labeling scheme. Conclusion: The evaluation results show that the accuracy is over 95% for some cases. We also analyze the effect of the parameters on the performance.

scholarly journals Investigating the impact of pre-processing techniques and pre-trained word embeddings in detecting Arabic health information on social media

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Yahya Albalawi ◽  
Jim Buckley ◽  
Nikola S. Nikolov
Keyword(s):  
Social Media ◽  
Deep Learning ◽  
Comprehensive Evaluation ◽  
Classification Problem ◽  
Data Sets ◽  
Word Embeddings ◽  
Data Set ◽  
Lower Accuracy ◽  
Health Related ◽  
The Impact

AbstractThis paper presents a comprehensive evaluation of data pre-processing and word embedding techniques in the context of Arabic document classification in the domain of health-related communication on social media. We evaluate 26 text pre-processings applied to Arabic tweets within the process of training a classifier to identify health-related tweets. For this task we use the (traditional) machine learning classifiers KNN, SVM, Multinomial NB and Logistic Regression. Furthermore, we report experimental results with the deep learning architectures BLSTM and CNN for the same text classification problem. Since word embeddings are more typically used as the input layer in deep networks, in the deep learning experiments we evaluate several state-of-the-art pre-trained word embeddings with the same text pre-processing applied. To achieve these goals, we use two data sets: one for both training and testing, and another for testing the generality of our models only. Our results point to the conclusion that only four out of the 26 pre-processings improve the classification accuracy significantly. For the first data set of Arabic tweets, we found that Mazajak CBOW pre-trained word embeddings as the input to a BLSTM deep network led to the most accurate classifier with F1 score of 89.7%. For the second data set, Mazajak Skip-Gram pre-trained word embeddings as the input to BLSTM led to the most accurate model with F1 score of 75.2% and accuracy of 90.7% compared to F1 score of 90.8% achieved by Mazajak CBOW for the same architecture but with lower accuracy of 70.89%. Our results also show that the performance of the best of the traditional classifier we trained is comparable to the deep learning methods on the first dataset, but significantly worse on the second dataset.

scholarly journals METAnnotatorX2: a Comprehensive Tool for Deep and Shallow Metagenomic Data Set Analyses

mSystems ◽  
2021 ◽  
Vol 6 (3) ◽  
Author(s):  
Christian Milani ◽  
Gabriele Andrea Lugli ◽  
Federico Fontana ◽  
Leonardo Mancabelli ◽  
Giulia Alessandri ◽  
...  
Keyword(s):  
Sensitivity And Specificity ◽  
Metagenomic Data ◽  
Data Sets ◽  
Data Set

We developed a novel tool, i.e., METAnnotatorX2, that includes a number of new advanced features for analysis of deep and shallow metagenomic data sets and is accompanied by (regularly updated) customized databases for archaea, bacteria, fungi, protists, and viruses. Both software and databases were developed so as to maximize sensitivity and specificity while including support for shallow metagenomic data sets.

scholarly journals Classification of Clinically Significant Prostate Cancer on Multi-Parametric MRI: A Validation Study Comparing Deep Learning and Radiomics

Cancers ◽  
2021 ◽  
Vol 14 (1) ◽  
pp. 12
Author(s):  
Jose M. Castillo T. ◽  
Muhammad Arif ◽  
Martijn P. A. Starmans ◽  
Wiro J. Niessen ◽  
Chris H. Bangma ◽  
...  
Keyword(s):  
Prostate Cancer ◽  
Deep Learning ◽  
Characteristic Curve ◽  
Model Development ◽  
Learning Model ◽  
Multiparametric Mri ◽  
Data Sets ◽  
Data Set ◽  
Test Sets ◽  
Deep Learning Model

The computer-aided analysis of prostate multiparametric MRI (mpMRI) could improve significant-prostate-cancer (PCa) detection. Various deep-learning- and radiomics-based methods for significant-PCa segmentation or classification have been reported in the literature. To be able to assess the generalizability of the performance of these methods, using various external data sets is crucial. While both deep-learning and radiomics approaches have been compared based on the same data set of one center, the comparison of the performances of both approaches on various data sets from different centers and different scanners is lacking. The goal of this study was to compare the performance of a deep-learning model with the performance of a radiomics model for the significant-PCa diagnosis of the cohorts of various patients. We included the data from two consecutive patient cohorts from our own center (n = 371 patients), and two external sets of which one was a publicly available patient cohort (n = 195 patients) and the other contained data from patients from two hospitals (n = 79 patients). Using multiparametric MRI (mpMRI), the radiologist tumor delineations and pathology reports were collected for all patients. During training, one of our patient cohorts (n = 271 patients) was used for both the deep-learning- and radiomics-model development, and the three remaining cohorts (n = 374 patients) were kept as unseen test sets. The performances of the models were assessed in terms of their area under the receiver-operating-characteristic curve (AUC). Whereas the internal cross-validation showed a higher AUC for the deep-learning approach, the radiomics model obtained AUCs of 0.88, 0.91 and 0.65 on the independent test sets compared to AUCs of 0.70, 0.73 and 0.44 for the deep-learning model. Our radiomics model that was based on delineated regions resulted in a more accurate tool for significant-PCa classification in the three unseen test sets when compared to a fully automated deep-learning model.

Semi supervised inspection algorithm of automatic packaging curve based on deep learning

2021 ◽  
pp. 1-10
Author(s):  
Yong He
Keyword(s):  
Deep Learning ◽  
Supervised Learning ◽  
Optimization Algorithm ◽  
Posterior Probability ◽  
Detection Method ◽  
Detection System ◽  
Experimental Results ◽  
Detection Accuracy ◽  
Data Set ◽  
Packaging Process

The current automatic packaging process is complex, requires high professional knowledge, poor universality, and difficult to apply in multi-objective and complex background. In view of this problem, automatic packaging optimization algorithm has been widely paid attention to. However, the traditional automatic packaging detection accuracy is low, the practicability is poor. Therefore, a semi-supervised detection method of automatic packaging curve based on deep learning and semi-supervised learning is proposed. Deep learning is used to extract features and posterior probability to classify unlabeled data. KDD CUP99 data set was used to verify the accuracy of the algorithm. Experimental results show that this method can effectively improve the performance of automatic packaging curve semi-supervised detection system.

Sign in / Sign up

Export Citation Format

Share Document