scholarly journals Comparative Genomic Analysis of Delftia tsuruhatensis MTQ3 and the Identification of Functional NRPS Genes for Siderophore Production

2016 ◽  
Vol 2016 ◽  
pp. 1-8 ◽  
Author(s):  
Haimeng Guo ◽  
Yanan Yang ◽  
Kai Liu ◽  
Wenfeng Xu ◽  
Jianyong Gao ◽  
...  
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Genetic Relationships ◽  
Draft Genome ◽  
Genomic Analysis ◽  
Plant Growth Promoting Rhizobacteria ◽  
Siderophore Production ◽  
Comparative Genomic ◽  
Plant Growth Promoting ◽  
Delftia Tsuruhatensis

Plant growth-promoting rhizobacteria (PGPR) are a group of rhizosphere bacteria that promote plant growth. Delftia tsuruhatensis MTQ3 is a member of PGPR that produces siderophores. The draft genome sequence of MTQ3 has been reported. Here, we analyzed the genome sequence of MTQ3 and performed a comparative genome analysis of four sequenced Delftia strains, revealing genetic relationships among these strains. In addition, genes responsible for bacteriocin and nonribosomal peptide synthesis were detected in the genomes of each strain. To reveal the functions of NRPS genes in siderophore production in D. tsuruhatensis MTQ3, three NRPS genes were knocked out to obtain the three mutants MTQ3-Δ1941, MTQ3-Δ1945, and MTQ3-Δ1946, which were compared with the wild-type strain. In qualitative and quantitative analyses using CAS assay, the mutants failed to produce siderophores. Accordingly, the NRPS genes in MTQ3 were functionally related to siderophore production. These results clarify one mechanism by which plant growth is promoted in MTQ3 and have important applications in agricultural production.

scholarly journals Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270

2016 ◽  
Vol 11 (1) ◽  
Author(s):  
Julie E. Hernández-Salmerón ◽  
Rocio Hernández-León ◽  
Ma. Del Carmen Orozco-Mosqueda ◽  
Eduardo Valencia-Cantero ◽  
Gabriel Moreno-Hagelsieb ◽  
...  
Keyword(s):  
Plant Growth ◽  
Pseudomonas Fluorescens ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Plant Growth Promoting ◽  
Growth Promoting

scholarly journals Draft Genome Sequence of Brevibacillus brevis DZQ7, a Plant Growth-Promoting Rhizobacterium with Broad-Spectrum Antimicrobial Activity

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Qihui Hou ◽  
Chengqiang Wang ◽  
Xiaoyang Hou ◽  
Zhilin Xia ◽  
Jiangping Ye ◽  
...  
Keyword(s):  
Antimicrobial Activity ◽  
Plant Growth ◽  
Genome Sequence ◽  
Broad Spectrum ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Functional Genes ◽  
Plant Growth Promoting ◽  
Brevibacillus Brevis ◽  
Growth Promoting

Brevibacillus brevis DZQ7 is a plant growth-promoting rhizobacterium (PGPR) isolated from tobacco rhizosphere. Here, we report the draft genome sequence of B. brevis DZQ7. Several functional genes related to antimicrobial activity were identified in the genome.

scholarly journals Draft Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas pseudoalcaligenes KB-10

2021 ◽  
Vol 10 (20) ◽  
Author(s):  
M. M. A. Khan ◽  
Jin Duan ◽  
Bernard R. Glick ◽  
Patrick M. Finnegan ◽  
Saleh A. Kabli ◽  
...  
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Circular Chromosome ◽  
Pseudomonas Pseudoalcaligenes ◽  
Content Type ◽  
Plant Growth Promoting ◽  
Growth Promoting

ABSTRACT Pseudomonas pseudoalcaligenes KB-10 can enhance salinity tolerance in coriander plants. We report a draft genome sequence of P. pseudoalcaligenes KB-10, comprising a 5,241,174-bp circular chromosome containing 4,921 genes, with a GC content of 62.97%.

scholarly journals Draft Genome Sequence of Root-Associated Sugarcane Growth-Promoting Microbispora sp. Strain GKU 823

2017 ◽  
Vol 5 (29) ◽  
Author(s):  
Worarat Kruasuwan ◽  
Paul A. Hoskisson ◽  
Arinthip Thamchaipenet
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Plant Growth Promoting Traits

ABSTRACT The endophytic plant growth-promoting Microbispora sp. strain GKU 823 was isolated from the roots of sugarcane cultivated in Thailand. It has an estimated 9.4-Mbp genome and a G+C content of 71.3%. The genome sequence reveals several genes associated with plant growth-promoting traits and extensive specialized metabolite biosynthesis.

scholarly journals Draft Genome Sequence of Plant Growth-Promoting Rhizobium Mesorhizobium amorphae, Isolated from Zinc-Lead Mine Tailings

2012 ◽  
Vol 194 (3) ◽  
pp. 736-737 ◽  
Author(s):  
X. Hao ◽  
Y. Lin ◽  
L. Johnstone ◽  
D. A. Baltrus ◽  
S. J. Miller ◽  
...  
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Mine Tailings ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Plant Growth Promoting ◽  
Growth Promoting

scholarly journals Draft Genome Sequence of the Plant Growth-Promoting Cupriavidus gilardii Strain JZ4 Isolated from the Desert Plant Tribulus terrestris

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Feras F. Lafi ◽  
Ameerah Bokhari ◽  
Intikhab Alam ◽  
Vladimir B. Bajic ◽  
Heribert Hirt ◽  
...  
Keyword(s):  
Plant Growth ◽  
Genome Sequence ◽  
Draft Genome ◽  
Endophytic Bacterium ◽  
Draft Genome Sequence ◽  
Desert Plant ◽  
Tribulus Terrestris ◽  
Plant Growth Promoting ◽  
Plant Growth Promoting Activity ◽  
Growth Promoting

We isolated the plant endophytic bacterium Cupriavidus gilardii strain JZ4 from the roots of the desert plant Tribulus terrestris , collected from the Jizan region, Saudi Arabia. We report here the draft genome sequence of JZ4, together with several enzymes related to plant growth-promoting activity, environmental adaption, and antifungal activity.

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