scholarly journals A study on the early detection of colon cancer using the methods of wavelet feature extraction and SVM classifications of FTIR

2008 ◽  
Vol 22 (5) ◽  
pp. 397-404 ◽  
Author(s):  
Cun-Gui Cheng ◽  
Yu-Mei Tian ◽  
Wen-Ying Jin

This paper introduces a new method for the early detection of colon cancer using a combination of feature extraction based on wavelets for Fourier Transform Infrared Spectroscopy (FTIR) and classification using the Support Vector Machine (SVM). The FTIR data collected from 36 normal SD rats, 60 1,2-DMH-induced SD rats, and 44 second generation rats of those induced rats was first preprocessed. Then, 12 feature variants were extracted using continuous wavelet analysis. The extracted feature variants were then inputted into the SVM for classification of normal, dysplasia, early carcinoma, and advanced carcinoma. Among the kernel functions the SVM used, the Poly and RBF kernels had the highest accuracy rates. The accuracy of the Poly kernel in normal, dysplasia, early carcinoma, and advanced carcinoma were 100, 97.5, 95% and 100% respectively. The accuracy of RBF kernel in normal, dysplasia, early carcinoma, and advanced carcinoma was 100, 95, 95% and 100% respectively. The results indicated that this method could effectively and easily diagnose colon cancer in its early stages.

Symmetry ◽  
2020 ◽  
Vol 12 (4) ◽  
pp. 667
Author(s):  
Wismaji Sadewo ◽  
Zuherman Rustam ◽  
Hamidah Hamidah ◽  
Alifah Roudhoh Chusmarsyah

Early detection of pancreatic cancer is difficult, and thus many cases of pancreatic cancer are diagnosed late. When pancreatic cancer is detected, the cancer is usually well developed. Machine learning is an approach that is part of artificial intelligence and can detect pancreatic cancer early. This paper proposes a machine learning approach with the twin support vector machine (TWSVM) method as a new approach to detecting pancreatic cancer early. TWSVM aims to find two symmetry planes such that each plane has a distance close to one data class and as far as possible from another data class. TWSVM is fast in building a model and has good generalizations. However, TWSVM requires kernel functions to operate in the feature space. The kernel functions commonly used are the linear kernel, polynomial kernel, and radial basis function (RBF) kernel. This paper uses the TWSVM method with these kernels and compares the best kernel for use by TWSVM to detect pancreatic cancer early. In this paper, the TWSVM model with each kernel is evaluated using a 10-fold cross validation. The results obtained are that TWSVM based on the kernel is able to detect pancreatic cancer with good performance. However, the best kernel obtained is the RBF kernel, which produces an accuracy of 98%, a sensitivity of 97%, a specificity of 100%, and a running time of around 1.3408 s.


Author(s):  
Ilsya Wirasati ◽  
Zuherman Rustam ◽  
Jane Eva Aurelia ◽  
Sri Hartini ◽  
Glori Stephani Saragih

<span id="docs-internal-guid-9a30056f-7fff-8ff1-59e1-69f89f4280bd"><span>In the medical field, accurate classification of medical data is really important because of its impact on disease detection and patient’s treatment. Technology, machine learning, is needed to help medical staff to improve accuracy to classify disease. This research discussed some kernel functions, such as gaussian radial basis function (RBF) kernel, Polynomial kernel, and linear kernel with support vector machine (SVM) to classify thalassemia data. Thalassemia is a genetic blood disorder which is also one of the major public health problems. In this paper, there is an explanation about thalassemia, SVM, and some of the kernel functions that serve as a comprehensive source for the next research about this topic. Furthermore, there is a comparison result from three kernel functions to find out which one has the best performance. The result is gaussian RBF kernel with SVM is the best method with an average of accuracy 99,63%. </span></span>


Author(s):  
Suhas S ◽  
Dr. C. R. Venugopal

An enhanced classification system for classification of MR images using association of kernels with support vector machine is developed and presented in this paper along with the design and development of content-based image retrieval (CBIR) system. Content of image retrieval is the process of finding relevant image from large collection of image database using visual queries. Medical images have led to growth in large image collection. Oriented Rician Noise Reduction Anisotropic Diffusion filter is used for image denoising. A modified hybrid Otsu algorithm termed is used for image segmentation. The texture features are extracted using GLCM method. Genetic algorithm with Joint entropy is adopted for feature selection. The classification is done by support vector machine along with various kernels and the performance is validated. A classification accuracy of 98.83% is obtained using SVM with GRBF kernel. Various features have been extracted and these features are used to classify MR images into five different categories. Performance of the MC-SVM classifier is compared with different kernel functions. From the analysis and performance measures like classification accuracy, it is inferred that the brain and spinal cord MRI classification is best done using MC- SVM with Gaussian RBF kernel function than linear and polynomial kernel functions. The proposed system can provide best classification performance with high accuracy and low error rate.


Author(s):  
G. Jayagopi ◽  
S. Pushpa

<span>Heart diseases had been molded as potential threats to human lives, especially to elderly people in recent days due to the dynamically varying food habits among the people. However, these diseases could be easily caught by proper analysis of Electrocardiogram (ECG) signals acquired from individuals. This paper proposes a better method to detect and classify the arrhythmia using 15 features which include 4 R-R interval features, 3 statistical and 6 chaotic features estimated from ECG signals. Additionally, Entropy and Energy features had been gained after converting one dimensional ECG signals to two dimensional data and applied Tetrolet transforms on that.  Total numbers of 15 features had been utilized to classify the heart beats from the benchmark MIT-Arrhythmia database using Support Vector Machines (SVM). The classification performance was analyzed under various kernel functions and different Tetrolet decomposition levels. It is found that Radial Basis Function (RBF) kernel could perform better than linear and polynomial kernels. This research attempt yielded an accuracy of 99.35 % against the existing works. Moreover, addition of two more features had introduced a negligible overhead of time. Hence, this method is better suitable to detect and classify the Arrhythmia in both online and offline.</span>


2010 ◽  
Vol 07 (04) ◽  
pp. 347-356
Author(s):  
E. SIVASANKAR ◽  
R. S. RAJESH

In this paper, Principal Component Analysis is used for feature extraction, and a statistical learning based Support Vector Machine is designed for functional classification of clinical data. Appendicitis data collected from BHEL Hospital, Trichy is taken and classified under three classes. Feature extraction transforms the data in the high-dimensional space to a space of fewer dimensions. The classification is done by constructing an optimal hyperplane that separates the members from the nonmembers of the class. For linearly nonseparable data, Kernel functions are used to map data to a higher dimensional space and there the optimal hyperplane is found. This paper works with different SVMs based on radial basis and polynomial kernels, and their performances are compared.


Author(s):  
Khalid AA Abakar ◽  
Chongwen Yu

This work demonstrated the possibility of using the data mining techniques such as artificial neural networks (ANN) and support vector machine (SVM) based model to predict the quality of the spinning yarn parameters. Three different kernel functions were used as SVM kernel functions which are Polynomial and Radial Basis Function (RBF) and Pearson VII Function-based Universal Kernel (PUK) and ANN model were used as data mining techniques to predict yarn properties. In this paper, it was found that the SVM model based on Person VII kernel function (PUK) have the same performance in prediction of spinning yarn quality in comparison with SVM based RBF kernel. The comparison with the ANN model showed that the two SVM models give a better prediction performance than an ANN model.


2019 ◽  
Vol 12 (1) ◽  
pp. 96 ◽  
Author(s):  
James Brinkhoff ◽  
Justin Vardanega ◽  
Andrew J. Robson

Land cover mapping of intensive cropping areas facilitates an enhanced regional response to biosecurity threats and to natural disasters such as drought and flooding. Such maps also provide information for natural resource planning and analysis of the temporal and spatial trends in crop distribution and gross production. In this work, 10 meter resolution land cover maps were generated over a 6200 km2 area of the Riverina region in New South Wales (NSW), Australia, with a focus on locating the most important perennial crops in the region. The maps discriminated between 12 classes, including nine perennial crop classes. A satellite image time series (SITS) of freely available Sentinel-1 synthetic aperture radar (SAR) and Sentinel-2 multispectral imagery was used. A segmentation technique grouped spectrally similar adjacent pixels together, to enable object-based image analysis (OBIA). K-means unsupervised clustering was used to filter training points and classify some map areas, which improved supervised classification of the remaining areas. The support vector machine (SVM) supervised classifier with radial basis function (RBF) kernel gave the best results among several algorithms trialled. The accuracies of maps generated using several combinations of the multispectral and radar bands were compared to assess the relative value of each combination. An object-based post classification refinement step was developed, enabling optimization of the tradeoff between producers’ accuracy and users’ accuracy. Accuracy was assessed against randomly sampled segments, and the final map achieved an overall count-based accuracy of 84.8% and area-weighted accuracy of 90.9%. Producers’ accuracies for the perennial crop classes ranged from 78 to 100%, and users’ accuracies ranged from 63 to 100%. This work develops methods to generate detailed and large-scale maps that accurately discriminate between many perennial crops and can be updated frequently.


Author(s):  
B. Yekkehkhany ◽  
A. Safari ◽  
S. Homayouni ◽  
M. Hasanlou

In this paper, a framework is developed based on Support Vector Machines (SVM) for crop classification using polarimetric features extracted from multi-temporal Synthetic Aperture Radar (SAR) imageries. The multi-temporal integration of data not only improves the overall retrieval accuracy but also provides more reliable estimates with respect to single-date data. Several kernel functions are employed and compared in this study for mapping the input space to higher Hilbert dimension space. These kernel functions include linear, polynomials and Radial Based Function (RBF). <br><br> The method is applied to several UAVSAR L-band SAR images acquired over an agricultural area near Winnipeg, Manitoba, Canada. In this research, the temporal alpha features of H/A/α decomposition method are used in classification. The experimental tests show an SVM classifier with RBF kernel for three dates of data increases the Overall Accuracy (OA) to up to 3% in comparison to using linear kernel function, and up to 1% in comparison to a 3rd degree polynomial kernel function.


2020 ◽  
Vol 37 (5) ◽  
pp. 812-822
Author(s):  
Behnam Asghari Beirami ◽  
Mehdi Mokhtarzade

In this paper, a novel feature extraction technique called SuperMNF is proposed, which is an extension of the minimum noise fraction (MNF) transformation. In SuperMNF, each superpixel has its own transformation matrix and MNF transformation is performed on each superpixel individually. The basic idea behind the SuperMNF is that each superpixel contains its specific signal and noise covariance matrices which are different from the adjacent superpixels. The extracted features, owning spatial-spectral content and provided in the lower dimension, are classified by maximum likelihood classifier and support vector machines. Experiments that are conducted on two real hyperspectral images, named Indian Pines and Pavia University, demonstrate the efficiency of SuperMNF since it yielded more promising results than some other feature extraction methods (MNF, PCA, SuperPCA, KPCA, and MMP).


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