scholarly journals Ion diffusion may introduce spurious current sources in current-source density (CSD) analysis

2017 ◽  
Vol 118 (1) ◽  
pp. 114-120 ◽  
Author(s):  
Geir Halnes ◽  
Tuomo Mäki-Marttunen ◽  
Klas H. Pettersen ◽  
Ole A. Andreassen ◽  
Gaute T. Einevoll

Current-source density (CSD) analysis is a well-established method for analyzing recorded local field potentials (LFPs), that is, the low-frequency part of extracellular potentials. Standard CSD theory is based on the assumption that all extracellular currents are purely ohmic, and thus neglects the possible impact from ionic diffusion on recorded potentials. However, it has previously been shown that in physiological conditions with large ion-concentration gradients, diffusive currents can evoke slow shifts in extracellular potentials. Using computer simulations, we here show that diffusion-evoked potential shifts can introduce errors in standard CSD analysis, and can lead to prediction of spurious current sources. Further, we here show that the diffusion-evoked prediction errors can be removed by using an improved CSD estimator which accounts for concentration-dependent effects. NEW & NOTEWORTHY Standard CSD analysis does not account for ionic diffusion. Using biophysically realistic computer simulations, we show that unaccounted-for diffusive currents can lead to the prediction of spurious current sources. This finding may be of strong interest for in vivo electrophysiologists doing extracellular recordings in general, and CSD analysis in particular.

PLoS ONE ◽  
2015 ◽  
Vol 10 (8) ◽  
pp. e0136125
Author(s):  
Sean P. Flynn ◽  
Sylvain Barriere ◽  
Rod C. Scott ◽  
Pierre-Pascal Lenck-Santini ◽  
Gregory L. Holmes

Epilepsia ◽  
2004 ◽  
Vol 45 (s4) ◽  
pp. 48-56 ◽  
Author(s):  
Istvan Ulbert ◽  
Gary Heit ◽  
Joseph Madsen ◽  
George Karmos ◽  
Eric Halgren

PLoS ONE ◽  
2015 ◽  
Vol 10 (7) ◽  
pp. e0132630
Author(s):  
Sean P. Flynn ◽  
Sylvain Barrier ◽  
Rod C. Scott ◽  
Pierre-Pascal Lenck- Santini ◽  
Gregory L. Holmes

2012 ◽  
Vol 24 (2) ◽  
pp. 541-575 ◽  
Author(s):  
Jan Potworowski ◽  
Wit Jakuczun ◽  
Szymon Łȩski ◽  
Daniel Wójcik

Local field potentials (LFP), the low-frequency part of extracellular electrical recordings, are a measure of the neural activity reflecting dendritic processing of synaptic inputs to neuronal populations. To localize synaptic dynamics, it is convenient, whenever possible, to estimate the density of transmembrane current sources (CSD) generating the LFP. In this work, we propose a new framework, the kernel current source density method (kCSD), for nonparametric estimation of CSD from LFP recorded from arbitrarily distributed electrodes using kernel methods. We test specific implementations of this framework on model data measured with one-, two-, and three-dimensional multielectrode setups. We compare these methods with the traditional approach through numerical approximation of the Laplacian and with the recently developed inverse current source density methods (iCSD). We show that iCSD is a special case of kCSD. The proposed method opens up new experimental possibilities for CSD analysis from existing or new recordings on arbitrarily distributed electrodes (not necessarily on a grid), which can be obtained in extracellular recordings of single unit activity with multiple electrodes.


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