Spatial and temporal trends and effects of population size on the frequency of color phenotypes in the wild red fox (Vulpes vulpes)

1996 ◽  
Vol 74 (9) ◽  
pp. 1622-1631 ◽  
Author(s):  
Bradley J. Swanson ◽  
Donald R. Johnson
Keyword(s):  
Vulpes Vulpes ◽  
Red Fox ◽  
Meta Analysis ◽  
Temporal Trends ◽  
Selective Advantage ◽  
Data Sets ◽  
Data Set ◽  
Color Morphs ◽  
In The Wild ◽  
Spatial And Temporal Trends

We analyzed the hypothesized relationships of temporal, spatial, and harvest trends with frequency of red fox (Vulpes vulpes) color morphs in 57 Hudson's Bay Company posts over a 20- to 26-year period, but found none of the strong relationships postulated to exist. A meta-analysis of each data set suggested a weak inverse relationship between latitude and frequency of the red morph. Meta-analysis further indicated a weak positive relationship with time and the frequency of the red phase, although this trend was not due to climate change. No relationship was found between harvest size and color phase, or between a 1-year lagged harvest size and color phase, which evaluated the effects of dispersal. The data sets did not allow conclusive determination of the mechanisms behind the trends, but it is postulated that a slight selective advantage is found for the dark morphs at high latitudes, while the temporal increase in frequency of the red phenotype is probably the result of northward dispersal from southern populations.

scholarly journals Explora: Interactive Querying of Multidimensional Data in the Context of Smart Cities

Sensors ◽  
2020 ◽  
Vol 20 (9) ◽  
pp. 2737
Author(s):  
Leandro Ordonez-Ante ◽  
Gregory Van Seghbroeck ◽  
Tim Wauters ◽  
Bruno Volckaert ◽  
Filip De Turck
Keyword(s):  
Smart City ◽  
Smart Cities ◽  
Temporal Trends ◽  
Multidimensional Data ◽  
Data Sets ◽  
Distributed Data ◽  
Key Factors ◽  
Distributed Data Processing ◽  
Spatial And Temporal Trends ◽  
Query Latency

Citizen engagement is one of the key factors for smart city initiatives to remain sustainable over time. This in turn entails providing citizens and other relevant stakeholders with the latest data and tools that enable them to derive insights that add value to their day-to-day life. The massive volume of data being constantly produced in these smart city environments makes satisfying this requirement particularly challenging. This paper introduces Explora, a generic framework for serving interactive low-latency requests, typical of visual exploratory applications on spatiotemporal data, which leverages the stream processing for deriving—on ingestion time—synopsis data structures that concisely capture the spatial and temporal trends and dynamics of the sensed variables and serve as compacted data sets to provide fast (approximate) answers to visual queries on smart city data. The experimental evaluation conducted on proof-of-concept implementations of Explora, based on traditional database and distributed data processing setups, accounts for a decrease of up to 2 orders of magnitude in query latency compared to queries running on the base raw data at the expense of less than 10% query accuracy and 30% data footprint. The implementation of the framework on real smart city data along with the obtained experimental results prove the feasibility of the proposed approach.

scholarly journals Global whole-rock geochemical database compilation

2019 ◽  
Author(s):  
Matthew Gard ◽  
Derrick Hasterok ◽  
Jacqueline Halpin
Keyword(s):  
Database Management ◽  
Temporal Trends ◽  
Physical Property ◽  
Database Management System ◽  
Geochemical Data ◽  
Data Sets ◽  
Unique Contribution ◽  
Data Set ◽  
Wide Range ◽  
Geochemical Indices

Abstract. Dissemination and collation of geochemical data are critical to promote rapid, creative and accurate research and place new results in an appropriate global context. To this end, we have assembled a global whole-rock geochemical database, with other associated sample information and properties, sourced from various existing databases and supplemented with numerous individual publications and corrections. Currently the database stands at 1,023,490 samples with varying amounts of associated information including major and trace element concentrations, isotopic ratios, and location data. The distribution both spatially and temporally is quite heterogeneous, however temporal distributions are enhanced over some previous database compilations, particularly in terms of ages older than ~ 1000 Ma. Also included are a wide range of computed geochemical indices, physical property estimates and naming schema on a major element normalized version of the geochemical data for quick reference. This compilation will be useful for geochemical studies requiring extensive data sets, in particular those wishing to investigate secular temporal trends. The addition of physical properties, estimated by sample chemistry, represents a unique contribution to otherwise similar geochemical databases. The data is published in .csv format for the purposes of simple distribution but exists in a format acceptable for database management systems (e.g. SQL). One can either manipulate this data using conventional analysis tools such as MATLAB®, Microsoft® Excel, or R, or upload to a relational database management system for easy querying and management of the data as unique keys already exist. This data set will continue to grow, and we encourage readers to contact us or other database compilations contained within about any data that is yet to be included. The data files described in this paper are available at https://doi.org/10.5281/zenodo.2592823 (Gard et al., 2019).

A systematical approach to classification problems with feature space heterogeneity

Kybernetes ◽  
2019 ◽  
Vol 48 (9) ◽  
pp. 2006-2029
Author(s):  
Hongshan Xiao ◽  
Yu Wang
Keyword(s):  
Factor Analysis ◽  
Meta Analysis ◽  
Feature Space ◽  
Classification Performance ◽  
Classification Algorithm ◽  
Significant Feature ◽  
Data Sets ◽  
Data Set ◽  
Classification Techniques ◽  
Content Type

Purpose Feature space heterogeneity exists widely in various application fields of classification techniques, such as customs inspection decision, credit scoring and medical diagnosis. This paper aims to study the relationship between feature space heterogeneity and classification performance. Design/methodology/approach A measurement is first developed for measuring and identifying any significant heterogeneity that exists in the feature space of a data set. The main idea of this measurement is derived from a meta-analysis. For the data set with significant feature space heterogeneity, a classification algorithm based on factor analysis and clustering is proposed to learn the data patterns, which, in turn, are used for data classification. Findings The proposed approach has two main advantages over the previous methods. The first advantage lies in feature transform using orthogonal factor analysis, which results in new features without redundancy and irrelevance. The second advantage rests on samples partitioning to capture the feature space heterogeneity reflected by differences of factor scores. The validity and effectiveness of the proposed approach is verified on a number of benchmarking data sets. Research limitations/implications Measurement should be used to guide the heterogeneity elimination process, which is an interesting topic in future research. In addition, to develop a classification algorithm that enables scalable and incremental learning for large data sets with significant feature space heterogeneity is also an important issue. Practical implications Measuring and eliminating the feature space heterogeneity possibly existing in the data are important for accurate classification. This study provides a systematical approach to feature space heterogeneity measurement and elimination for better classification performance, which is favorable for applications of classification techniques in real-word problems. Originality/value A measurement based on meta-analysis for measuring and identifying any significant feature space heterogeneity in a classification problem is developed, and an ensemble classification framework is proposed to deal with the feature space heterogeneity and improve the classification accuracy.

scholarly journals Has open data arrived at the British Medical Journal (BMJ)? An observational study

BMJ Open ◽  
2016 ◽  
Vol 6 (10) ◽  
pp. e011784 ◽  
Author(s):  
Anisa Rowhani-Farid ◽  
Adrian G Barnett
Keyword(s):  
Medical Journal ◽  
British Medical Journal ◽  
Observational Study ◽  
Data Sharing ◽  
Meta Analysis ◽  
Open Data ◽  
Research Articles ◽  
Data Sets ◽  
Data Set ◽  
Article 50

ObjectiveTo quantify data sharing trends and data sharing policy compliance at the British Medical Journal (BMJ) by analysing the rate of data sharing practices, and investigate attitudes and examine barriers towards data sharing.DesignObservational study.SettingThe BMJ research archive.Participants160 randomly sampled BMJ research articles from 2009 to 2015, excluding meta-analysis and systematic reviews.Main outcome measuresPercentages of research articles that indicated the availability of their raw data sets in their data sharing statements, and those that easily made their data sets available on request.Results3 articles contained the data in the article. 50 out of 157 (32%) remaining articles indicated the availability of their data sets. 12 used publicly available data and the remaining 38 were sent email requests to access their data sets. Only 1 publicly available data set could be accessed and only 6 out of 38 shared their data via email. So only 7/157 research articles shared their data sets, 4.5% (95% CI 1.8% to 9%). For 21 clinical trials bound by the BMJ data sharing policy, the per cent shared was 24% (8% to 47%).ConclusionsDespite the BMJ's strong data sharing policy, sharing rates are low. Possible explanations for low data sharing rates could be: the wording of the BMJ data sharing policy, which leaves room for individual interpretation and possible loopholes; that our email requests ended up in researchers spam folders; and that researchers are not rewarded for sharing their data. It might be time for a more effective data sharing policy and better incentives for health and medical researchers to share their data.

scholarly journals Investigating the Role of Culture on Negative Emotion Expressions in the Wild

2021 ◽  
Vol 15 ◽  
Author(s):  
Emma Hughson ◽  
Roya Javadi ◽  
James Thompson ◽  
Angelica Lim
Keyword(s):  
Emotion Recognition ◽  
North American ◽  
Affective Computing ◽  
Negative Emotion ◽  
Negative Emotions ◽  
Support Vector ◽  
Data Sets ◽  
Social Signals ◽  
Data Set ◽  
In The Wild

Even though culture has been found to play some role in negative emotion expression, affective computing research primarily takes on a basic emotion approach when analyzing social signals for automatic emotion recognition technologies. Furthermore, automatic negative emotion recognition systems still train data that originates primarily from North America and contains a majority of Caucasian training samples. As such, the current study aims to address this problem by analyzing what the differences are of the underlying social signals by leveraging machine learning models to classify 3 negative emotions, contempt, anger and disgust (CAD) amongst 3 different cultures: North American, Persian, and Filipino. Using a curated data set compiled from YouTube videos, a support vector machine (SVM) was used to predict negative emotions amongst differing cultures. In addition a one-way ANOVA was used to analyse the differences that exist between each culture group in-terms of level of activation of underlying social signal. Our results not only highlighted the significant differences in the associated social signals that were activated for each culture, but also indicated the specific underlying social signals that differ in our cross-cultural data sets. Furthermore, the automatic classification methods showed North American expressions of CAD to be well-recognized, while Filipino and Persian expressions were recognized at near chance levels.

scholarly journals Scientific impact of MODIS C5 calibration degradation and C6+ improvements

2014 ◽  
Vol 7 (12) ◽  
pp. 4353-4365 ◽  
Author(s):  
A. Lyapustin ◽  
Y. Wang ◽  
X. Xiong ◽  
G. Meister ◽  
S. Platnick ◽  
...  
Keyword(s):  
Vegetation Index ◽  
Near Infrared ◽  
Atmospheric Correction ◽  
Temporal Trends ◽  
Polarization Sensitivity ◽  
Data Sets ◽  
Surface Reflectance ◽  
Data Set ◽  
Cross Calibration ◽  
Calibration Approach

Abstract. The Collection 6 (C6) MODIS (Moderate Resolution Imaging Spectroradiometer) land and atmosphere data sets are scheduled for release in 2014. C6 contains significant revisions of the calibration approach to account for sensor aging. This analysis documents the presence of systematic temporal trends in the visible and near-infrared (500 m) bands of the Collection 5 (C5) MODIS Terra and, to lesser extent, in MODIS Aqua geophysical data sets. Sensor degradation is largest in the blue band (B3) of the MODIS sensor on Terra and decreases with wavelength. Calibration degradation causes negative global trends in multiple MODIS C5 products including the dark target algorithm's aerosol optical depth over land and Ångström exponent over the ocean, global liquid water and ice cloud optical thickness, as well as surface reflectance and vegetation indices, including the normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI). As the C5 production will be maintained for another year in parallel with C6, one objective of this paper is to raise awareness of the calibration-related trends for the broad MODIS user community. The new C6 calibration approach removes major calibrations trends in the Level 1B (L1B) data. This paper also introduces an enhanced C6+ calibration of the MODIS data set which includes an additional polarization correction (PC) to compensate for the increased polarization sensitivity of MODIS Terra since about 2007, as well as detrending and Terra–Aqua cross-calibration over quasi-stable desert calibration sites. The PC algorithm, developed by the MODIS ocean biology processing group (OBPG), removes residual scan angle, mirror side and seasonal biases from aerosol and surface reflectance (SR) records along with spectral distortions of SR. Using the multiangle implementation of atmospheric correction (MAIAC) algorithm over deserts, we have also developed a detrending and cross-calibration method which removes residual decadal trends on the order of several tenths of 1% of the top-of-atmosphere (TOA) reflectance in the visible and near-infrared MODIS bands B1–B4, and provides a good consistency between the two MODIS sensors. MAIAC analysis over the southern USA shows that the C6+ approach removed an additional negative decadal trend of Terra ΔNDVI ~ 0.01 as compared to Aqua data. This change is particularly important for analysis of vegetation dynamics and trends in the tropics, e.g., Amazon rainforest, where the morning orbit of Terra provides considerably more cloud-free observations compared to the afternoon Aqua measurements.

scholarly journals Combining linkage data sets for meta-analysis and mega-analysis: the GAW15 rheumatoid arthritis data set

2007 ◽  
Vol 1 (Suppl 1) ◽  
pp. S104 ◽  
Author(s):  
Ricardo Segurado ◽  
Marian L Hamshere ◽  
Beate Glaser ◽  
Ivan Nikolov ◽  
Valentina Moskvina ◽  
...  
Keyword(s):  
Rheumatoid Arthritis ◽  
Meta Analysis ◽  
Linkage Data ◽  
Data Sets ◽  
Data Set ◽  
Rheumatoid Arthritis Data

Historical operational data analysis for defence preparedness planning

2016 ◽  
Vol 15 (2) ◽  
pp. 231-244
Author(s):  
Kamran Shafi ◽  
Essam Debie ◽  
David Oliver
Keyword(s):  
Data Analysis ◽  
Descriptive Analysis ◽  
Temporal Trends ◽  
Predictive Analysis ◽  
Data Set ◽  
Preparedness Planning ◽  
Australian Defence Force ◽  
Spatial And Temporal Trends ◽  
National Defence ◽  
Operational Data

Preparedness is an important function of defence planning that involves developing defence capabilities to deal with emergent situations relating to national defence and security. Preparedness planning relies on a number of inputs, including requirement analysis, to identify critical capability gaps. Modern data analysis can play an important role in identifying such future requirements. To this end, this paper presents an analytical study, consisting of both descriptive as well as predictive analysis, of historical defence operational data. The descriptive analysis component of the methodology focuses on identifying useful features in the collected data for building a predictive model. The predictive analysis investigates existing patterns in the data, including spatial and temporal trends. An artificial neural network based time series forecasting model is developed to predict future operations based on the identified features. The proposed methodology is applied to a defence operational data set, built from a number of unclassified sources relating to the historical operational deployments of the Australian Defence Force between 1885 and 2012. Implications are also discussed.

scholarly journals Global whole-rock geochemical database compilation

2019 ◽  
Vol 11 (4) ◽  
pp. 1553-1566 ◽  
Author(s):  
Matthew Gard ◽  
Derrick Hasterok ◽  
Jacqueline A. Halpin
Keyword(s):  
Database Management ◽  
Temporal Trends ◽  
Temporal Distribution ◽  
Physical Property ◽  
Database Management System ◽  
Geochemical Data ◽  
Data Sets ◽  
Unique Contribution ◽  
Data Set ◽  
Geochemical Indices

Abstract. Collation and dissemination of geochemical data are critical to promote rapid, creative, and accurate research and place new results in an appropriate global context. To this end, we have compiled a global whole-rock geochemical database, sourced from various existing databases and supplemented with an extensive list of individual publications. Currently the database stands at 1 022 092 samples with varying amounts of associated sample data, including major and trace element concentrations, isotopic ratios, and location information. Spatial and temporal distribution is heterogeneous; however, temporal distributions are enhanced over some previous database compilations, particularly in ages older than ∼ 1000 Ma. Also included are a range of geochemical indices, various naming schema, and physical property estimates computed on a major element normalized version of the geochemical data for quick reference. This compilation will be useful for geochemical studies requiring extensive data sets, in particular those wishing to investigate secular temporal trends. The addition of physical properties, estimated from sample chemistry, represents a unique contribution to otherwise similar geochemical databases. The data are published in .csv format for the purposes of simple distribution, but exist in a structure format acceptable for database management systems (e.g. SQL). One can either manipulate these data using conventional analysis tools such as MATLAB®, Microsoft® Excel, or R, or upload them to a relational database management system for easy querying and management of the data as unique keys already exist. The data set will continue to grow and be improved, and we encourage readers to contact us or other database compilations within about any data that are yet to be included. The data files described in this paper are available at https://doi.org/10.5281/zenodo.2592822 (Gard et al., 2019a).

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