Genetic relationship of wood and plains bison based on restriction fragment length polymorphisms

1991 ◽  
Vol 69 (1) ◽  
pp. 43-48 ◽  
Author(s):  
A. M. Bork ◽  
C. M. Strobeck ◽  
F. C. Yeh ◽  
R. J. Hudson ◽  
R. K. Salmon

To evaluate the genetic relationship within and between wood and plains bison of Elk Island National Park, genomic DNA samples were screened for restriction fragment length polymorphisms (RFLP) with cDNA probes for growth hormone, growth hormone releasing factor, somatostatin, and insulin-like growth factor-1. Of the 28 fragments identified, two revealed RFLPs, both of which were associated with the growth hormone releasing factor locus. The observed frequencies of the polymorphic sites did not differ from a Hardy–Weinberg distribution in either population, which is indicative of random mating populations. The contingency χ2 tests for homogeneity indicate that the fragment frequencies of the polymorphic restriction sites differ significantly (P = 0.00) between the wood and plains bison. The number of net nucleotide substitutions between the two populations was 0.0007, indicative of a recent divergence. Conversion of the bison nucleotide divergence results in a relative protein divergence of 0.007 to 0.018. This converted divergence corresponds closely to the divergence reported for other geographically isolated populations; thus, this preliminary analysis suggests the bison have at least reached the stage of geographic isolation in their evolutionary divergence.

1995 ◽  
Vol 66 (2) ◽  
pp. 109-126 ◽  
Author(s):  
Jinrui Shi ◽  
David G. Heckel ◽  
Marian R. Goldsmith

SummaryWe present data for the initial construction of a molecular linkage map for the domesticated silkworm, Bombyx mori, based on 52 progeny from an F2 cross from a pair mating of inbred strains p50 and C108, using restriction fragment length polymorphisms (RFLPs). The map contains 15 characterized single copy sequences, 36 anonymous sequences derived from a follicular cDNA library, and 10 loci corresponding to a low copy number retrotransposon, mag. The 15 linkage groups and 8 ungrouped loci account for 23 of the 28 chromosomes and span a total recombination length of 413 cM; 10 linkage groups were correlated with established classic genetic maps. Scoring data from Southern blots were analysed using two Pascal programs written specifically to analyse linkage data in Lepidoptera, where females are the heterogametic sex and have achiasmatic meiosis (no crossing-over). These first examine evidence for linkage by calculating the maximum lod score under the hypothesis that the two loci are linked over the likelihood under the hypothesis that the two loci assort independently, and then determine multilocus linkage maps for groups of putatively syntenic loci by calculating the maximum likelihood estimate of the recombination fractions and the log likelihood using the EM algorithm for a specified order of loci along the chromosome. In addition, the possibility of spurious linkage was exhaustively tested by searching for genotypes forbidden by the absence of crossing-over in one sex.


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