A comparison of methodological approaches to the subfamilial classification of the Naididae (Oligochaeta)

1987 ◽  
Vol 65 (3) ◽  
pp. 691-707 ◽  
Author(s):  
A. F. L. Nemec ◽  
R. O. Brinkhurst
Keyword(s):  
Data Matrix ◽  
Jaccard Coefficient ◽  
Data Set ◽  
Parsimony Method ◽  
Fit Statistics ◽  
Reconstruction Methods ◽  
Linkage Methods ◽  
The Family ◽  
First Time

A data matrix of 23 generic or subgeneric taxa versus 24 characters and a shorter matrix of 15 characters were analyzed by means of ordination, cluster analyses, parsimony, and compatibility methods (the last two of which are phylogenetic tree reconstruction methods) and the results were compared inter alia and with traditional methods. Various measures of fit for evaluating the parsimony methods were employed. There were few compatible characters in the data set, and much homoplasy, but most analyses separated a group based on Stylaria from the rest of the family, which could then be separated into four groups, recognized here for the first time as tribes (Naidini, Derini, Pristinini, and Chaetogastrini). There was less consistency of results within these groups. Modern methods produced results that do not conflict with traditional groupings. The Jaccard coefficient minimizes the significance of symplesiomorphy and complete linkage avoids chaining effects and corresponds to actual similarities, unlike single or average linkage methods, respectively. Ordination complements cluster analysis. The Wagner parsimony method was superior to the less flexible Camin–Sokal approach and produced better measure of fit statistics. All of the aforementioned methods contain areas susceptible to subjective decisions but, nevertheless, they lead to a complete disclosure of both the methods used and the assumptions made, and facilitate objective hypothesis testing rather than the presentation of conflicting phylogenies based on the different, undisclosed premises of manual approaches.

Phylogeny of the Mycetophiliformia, with proposal of the subfamilies  Heterotrichinae, Ohakuneinae, and Chiletrichinae for the Rangomaramidae (Diptera, Bibionomorpha)

Zootaxa ◽  
2007 ◽  
Vol 1535 (1) ◽  
pp. 1-92 ◽  
Author(s):  
DALTON DE SOUZA AMORIM ◽  
EIRIK RINDAL
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Sister Group ◽  
Data Matrix ◽  
Southern Brazil ◽  
The Family ◽  
First Time ◽  
A New Species ◽  
Transformation Series

A phylogenetic analysis of the Mycetophiliformia (= Sciaroidea) was performed to determine the relationships among its families and to place the following genera of uncertain position in the system: Heterotricha, Ohakunea, Colonomyia, Freemanomyia, Rhynchoheterotricha, Chiletricha, Afrotricha, Anisotricha, Kenyatricha, Nepaletricha, Sciarosoma, Sciaropota, Insulatricha, Cabamofa, Rogambara, and Starkomyia. Eratomyia n. gen. is described based on a new species from Ecuador. Colonomyia brasiliana sp.n. and Colonomyia freemani sp.n. are described respectively from southern Brazil and Chile. The male of Cabamofa mira Jaschhof is described for the first time. A total of 64 terminal taxa and 137 transformation series (with 202 characters) were included in the data matrix, with a number of new features from thoracic morphology. Willi Hennig’s 1973 system for the higher Bibionomorpha was adopted using the name Mycetophiliformia for the Sciaroidea. The Mycetophiliformia are monophyletic. The family Cecidomyiidae appears as the sister group of the remaining Mycetophiliformia, followed by the Sciaridae. In the preferred topology, the Rangomaramidae appear as the group sister of a clade consisting of (Ditomyiidae + Bolitophilidae + Diadocidiidae + Keroplatidae) and of (Lygistorrhinidae + Mycetophilidae). The topology within the Rangomaramidae is (Chiletrichinae subfam. n. (Heterotrichinae subfam. n. ((Rangomaraminae + Ohakuneinae subfam. n.))). The Chiletrichinae include the genera Kenyatricha, Rhynchoheterotricha, Insulatricha, Chiletricha, and Eratomyia n. gen. Heterotrichinae and Rangomaraminae are monotypic. The subfamily Ohakuneinae includes Ohakunea, Colonomyia, Cabamofa, and Rogambara. The positions of Freemanomyia, Loicia, Taxicnemis, Sciaropota, Starkomyia, Anisotricha, Nepaletricha, and Sciarosoma are considered. Afrotricha might belong to the Sciaridae. The similarities used by many authors to gather the Sciaridae and Mycetophilidae in a clade are shown to be a combination of plesiomorphies and homoplasies.

The comparative morphology of the male and female postabdomen of the Australian Tachinidae (Diptera), with descriptions of some first-instar larvae and pupae

1988 ◽  
Vol 2 (1) ◽  
pp. 81 ◽  
Author(s):  
BK Cantrell
Keyword(s):  
Comparative Morphology ◽  
Instar Larva ◽  
Taxonomic Position ◽  
Specific Level ◽  
Male And Female ◽  
First Instar ◽  
New Information ◽  
The Family ◽  
First Time

The comparactive morphology of the male and female postabdomen of the Australian Tachinidae was studied in a survey which included 152 species of representative genera from all subfamilies except Dufouriinae. The value of the structure of the postabdomen for the higher classification of the family was ascertained, and new information gained which has allowed a better understanding of the correct taxonomic position of some problem groups of tachinids. It was possible to recognise suites of characters for each sex to define each subfamily, but this was not possible at tribal or generic levels in most groups. The male terininalia are diagnostic at specific level. The survey also allowed the discovery of, or confirmed, the reproductive habit of the included genera and provided information on the first-instar larva of 52 species, many of which larvae are described below for the first time. Characters of puparia which may have taxonomic value are discussed and illustrated.

scholarly journals Classification of Ancient Roman Coins by Denomination Using Colour, a Forgotten Feature in Automatic Ancient Coin Analysis

Sci ◽  
2020 ◽  
Vol 2 (2) ◽  
pp. 37
Author(s):  
Yuanyuan Ma ◽  
Ognjen Arandjelović
Keyword(s):  
Relevant Information ◽  
Data Set ◽  
Roman Coins ◽  
Methodological Approaches ◽  
Ancient Coin ◽  
Number Of Classes ◽  
First Time ◽  
Enormous Number ◽  
Potential Use

Ancient numismatics, that is, the study of ancient currencies (predominantly coins), is an interesting domain for the application of computer vision and machine learning, and has been receiving an increasing amount of attention in recent years. Notwithstanding the number of articles published on the topic, the variety of different methodological approaches described, and the mounting realisation that the relevant problems in the field are most challenging indeed, all research to date has entirely ignored one specific, readily accessible modality: colour. Invariably, colour is discarded and images of coins treated as being greyscale. The present article is the first one to question this decision (and indeed, it is a decision). We discuss the reasons behind the said choice, present a case why it ought to be reexamined, and in turn investigate the issue for the first time in the published literature. Specifically, we propose two new colour-based representations specifically designed with the aim of being applied to ancient coin analysis, and argue why it is sensible to employ them in the first stages of the classification process as a means of drastically reducing the initially enormous number of classes involved in type matching ancient coins (tens of thousands, just for Ancient Roman Imperial coins). Furthermore, we introduce a new data set collected with the specific aim of denomination-based categorisation of ancient coins, where we hypothesised colour could be of potential use, and evaluate the proposed representations. Lastly, we report surprisingly successful performances which goes further than confirming our hypothesis—rather, they convincingly demonstrate a much higher relevant information content carried by colour than even we expected. Thus we trust that our findings will be noted by others in the field and that more attention and further research will be devoted to the use of colour in automatic ancient coin analysis.

A STUDY OF THE SYSTEMATICS OF THE WATER MITE FAMILY PIONIDAE (PROSTIGMATA: PARASITENGONA)

1976 ◽  
Vol 108 (S98) ◽  
pp. 1-249 ◽  
Author(s):  
Ian M. Smith
Keyword(s):  
Morphological Data ◽  
Water Mite ◽  
Male Adult ◽  
The Family ◽  
Species Groups ◽  
Three New Species ◽  
First Time ◽  
Insight Into ◽  
Mite Family

AbstractA phylogeny is proposed for the 30 species groups in the 13 genera here included in the family Pionidae. The phylogeny is based upon a detailed analysis of available morphological data for larval and adult stages according to the methodology advocated by Hennig. This methodology is outlined and discussed. The proposed phylogeny provides the basis for a revised classification of the pionids and permits new insight into certain biological manifestations of phylogeny, namely habitat diversification, life history modification, and geographic distribution, in the group.Original descriptions are provided for the larvae of 41 pionid species (20 for the first time) representing 24 species groups in eight genera. Three new species, Wettina ontario n. sp., Forelia pinguipalpis n. sp., and Tiphys cooki n. sp., are described along with the previously undescribed male adult of Pseudofeltria multipora Cook and female adults of Forelia cayuga Habeeb and Forelia onondaga Habeeb. Keys and new diagnoses are presented for pionid genera and species groups. Keys to the larvae and adults, and new distributional data, are included for the pionid species known to occur in Ontario.

A new predatory leech from Vietnam (Hirudinida : Arhynchobdellida : Salifidae): its phylogenetic position with comments on the classification of the family

2015 ◽  
Vol 29 (5) ◽  
pp. 473 ◽  
Author(s):  
Takafumi Nakano ◽  
Son Truong Nguyen
Keyword(s):  
Phylogenetic Relationships ◽  
Phylogenetic Analyses ◽  
Morphological Characteristics ◽  
Molecular Data ◽  
Phylogenetic Position ◽  
12S Rrna ◽  
The Family ◽  
Morphological And Molecular Data ◽  
First Time

The family Salifidae is a predaceous leech taxon in the suborder Erpobdelliformes. Although Salifidae is widely distributed in the African, Oriental, Indo-Malayan, Sino-Japanese and Australasian regions, the phylogenetic relationships of the family Salifidae have never been tested using molecular data obtained from leeches collected from the family distributional range. A salifid species was collected for the first time in Vietnam, and relevant morphological and molecular data are presented here. Because the Vietnamese salifid species possesses unique morphological characteristics among the known salifid species, this species is herein described as a new species, Salifa motokawai, sp. nov. Phylogenetic analyses based on nuclear 18S rRNA and histone H3, as well as mitochondrial cytochrome c oxidase subunit I, tRNACys, tRNAMet, 12S rRNA, tRNAVal, 16S rRNA, tRNALeu and NADH dehydrogenase subunit 1 markers demonstrate that the Vietnamese salifid species is a close congener with the African Salifa perspicax and the Malagasy Linta be. Furthermore, molecular data revealed non-monophyly of the Asian salifid leeches. According to the observed phylogenetic relationships and morphological characteristics of the Vietnamese Salifa motokawai, sp. nov., the current classification of salifid taxa should be revised.

scholarly journals Phylogenetic evidence for an expanded circumscription of Gabura (Arctomiaceae)

2020 ◽  
Vol 52 (1) ◽  
pp. 3-15
Author(s):  
Nicolas Magain ◽  
Toby Spribille ◽  
Joseph DiMeglio ◽  
Peter R. Nelson ◽  
Jolanta Miadlikowska ◽  
...  
Keyword(s):  
South Africa ◽  
North America ◽  
Molecular Taxonomy ◽  
Distinct Species ◽  
New Combinations ◽  
Morphological Convergence ◽  
The Family ◽  
Phylogenetic Lineages ◽  
First Time

AbstractSince the advent of molecular taxonomy, numerous lichen-forming fungi with homoiomerous thalli initially classified in the family Collemataceae Zenker have been transferred to other families, highlighting the extent of morphological convergence within Lecanoromycetes O. E. Erikss. & Winka. While the higher level classification of these fungi might be clarified by such transfers, numerous specific and generic classifications remain to be addressed. We examined the relationships within the broadly circumscribed genus Arctomia Th. Fr., which has been the recipient of several transfers from Collemataceae. We demonstrated that Arctomia insignis (P. M. Jørg. & Tønsberg) Ertz does not belong to Arctomia s. str. but forms a strong monophyletic group with Gabura fascicularis (L.) P. M. Jørg. We also confirmed that Arctomia borbonica Magain & Sérus. and the closely related Arctomia insignis represent two species. We formally transferred A. insignis and A. borbonica to the genus Gabura Adans. and introduced two new combinations: Gabura insignis and Gabura borbonica. We reported Gabura insignis from Europe (Scotland and Ireland) for the first time. While material from Europe and North America is genetically almost identical, specimens from Madagascar, South Africa and Reunion Island belong to three distinct phylogenetic lineages, all of which are present in the latter area and may represent distinct species. In its current circumscription, the genus Gabura may contain up to six species, whereas Arctomia s. str. includes only two species (A. delicatula Th. Fr. and A. teretiuscula P. M. Jørg.). The Gabura insignis group is shown to have an unexpectedly large, subcosmopolitan distribution. With the extended sampling from Arctomiaceae Th. Fr., the placement of Steinera sorediata P. James & Henssen in the genus Steinera Zahlbr. is confirmed and the presence of a new Steinera species from Chile is highlighted.

Reassessment of the classification of the Ophiuroidea (Echinodermata), based on morphological characters. I. General character evaluation and delineation of the families Ophiomyxidae and Ophiacanthidae

Zootaxa ◽  
2019 ◽  
Vol 2697 (1) ◽  
pp. 1 ◽  
Author(s):  
ALEXANDER MARTYNOV
Keyword(s):  
Morphological Characters ◽  
General Character ◽  
New Genus And Species ◽  
Type Specimens ◽  
The Family ◽  
Taxonomic Marker ◽  
First Time ◽  
The Relationship ◽  
Made In

Most of the taxonomically reliable internal and microstructural characters (e.g. jaws, dental plate, genital plates, vertebrae) of the recent Ophiuroidea are studied using SEM on a broad comparative basis for the first time, including examination of the arm spine articulation shape in 178 species from 105 genera and 16 families encompassing all major ophiuroid generic diversity. Numerous taxonomic contradictions caused by “over-applying” of external characters to traditional ophiuroid systematics are found and analyzed. Among newly applied microstructural characters, the shape of the arm spine articulations is found to be of great importance for ophiuroid taxonomy at all levels, from order to species. An identification key of the ophiuroid families based exclusively on the shape of the arm spine articulations is presented. Major genera of Ophiacanthidae were studied in order to delineate this family. The group of taxa, traditionally known as the ophiacanthid subfamily Ophiotominae (Paterson, 1985) that was apparently intermediate between Ophiomyxidae and Ophiacanthidae, including the genera Amphilimna Verrill, 1899, Ophiocymbium Lyman, 1880, Ophiodaces Koehler, 1922, Ophiodelos Koehler, 1930, Ophiolimna Verrill, 1899, Ophiologimus H.L. Clark, 1911, Ophiomedea Koehler, 1906, Ophiophrura H.L. Clark, 1911, Ophiopristis Verrill, 1899, Ophioprium H.L. Clark, 1915, Ophiosparte Koehler, 1922, Ophiotoma Lyman, 1883, Ophiotrema Koehler, 1896 was studied in detail using most of available type specimens. In order to study interspecific variability and usefulness as a taxonomic marker of the arm spine articulations, four new species of the apparently ophiotomin genus Ophiocymbium are described: O. antarcticus sp. nov., O. ninae sp. nov., O. tanyae sp. nov. and O. rarispinum sp. nov. A new genus and species, which has affinities to Ophiotominae, Ophioplexa condita gen. et sp. nov. is described. It is demonstrated that many of the genera traditionally included in the subfamily Ophiotominae, e.g. the genera Ophiocymbium, Ophiologimus, Ophiophrura, Ophioprium and Ophioplexa condita gen. et sp. nov., belong to the family Ophiomyxidae instead of Ophiacanthidae. Another apparently intermediate taxon, Ophiorupta discrepans (Koehler, 1922) comb. nov. is also considered as an ophiomyxid. Several further genera with disputed taxonomic placement, e.g. Amphilimna, Ophiopsila, Ophiolimna, Ophioconis, were studied especially and their revised placement is proposed. The following genera are exluded from the family Ophiacanthidae: Amphilimna, Ophiocymbium, Opiodaces, Ophiodelos, Ophiologimus, Ophiophrura, Ophioprium and Ophiosparte. The previously proposed paraphyly of the family Ophiacanthidae (Smith et al., 1995) was to a great extent caused by including a number of genera from distantly related families. The relationship between extinct Oegophiurida and recent ophiuroids was analyzed. A remarkable similarity between arm spine articulations of some Paleozoic oegophiurids and the recent ophiomyxid Ophioscolex glacialis Müller & Troschel, 1842 was discovered. Oegophiurid groove spines are suggested to be homologous with the tentacle scales of the remaining Ophiuroidea. It is suggested that the family Ophiomyxidae thus may be related to some crown Oegophiurida that had already acquired fused vertebrae. The higher ophiuroid taxonomy, based on the genital plate patterns, is critically analyzed in the light of the present data. It is suggested that instead of earlier proposed numerous ophiuroid subgroups most ophiuroid families are closely related. It is suggested, that most of the ophiuroid families (includes Ophiomyxidae, Ophiacanthidae, Ophiodermatidae, Ophiocomidae, Ophionereididae, Ophiochitonidae, Amphilepididae, Amphiuridae, Ophiactidae, Ophiolepididae, Hemieuryalidae, Ophiotrichidae) form a compact group with numerous intermediate taxa even between apparently very different families, whereas the family Ophiuridae and the traditional order Euryalida are more distantly related to the rest of Ophiuroidea. An appropriate name for this higher ophiuroid group will be suggested after a detailed analysis of other ophiuroid groups, which will be made in further publications of this series.

NEUE GATTUNGEN UND ARTEN DER ACALYPTERATAE

1969 ◽  
Vol 101 (6) ◽  
pp. 589-633 ◽  
Author(s):  
Von Willi Hennig
Keyword(s):  
New Species ◽  
New Genus ◽  
New Genera ◽  
The Family ◽  
The World ◽  
Two New Species ◽  
Three New Species ◽  
First Time ◽  
One New Species

AbstractSome 35 species (mostly Neotropical, 22 new) of acalypterate flies representing 17 genera (3 new) in six families, as follows, are treated: Family Cypselosomatidae. One species from Nepal, Cypselosoma gephyrae Hendel (?), is discussed.Family Pseudopomyzidae. The classification of the family is reviewed, and a key to the world genera is provided. The genus Latheticomyia Wheeler is placed here for the first time, and two new species, L. longiterebra (Peru) and L. rotundicornis (Mexico), are described. Two new genera, Pseudopomyzella and Rhinopomyzella, are erected for three new species, P. flava (Peru), R. albimana (Brazil), and R. nigrimana (Brazil).Family Periscelidae. The genus Periscelis Loew is recorded from Mexico and Peru. Neoscutops peruvianus and Scutops striatus, both from Peru, are described as new.Family Aulacigastridae. The classification of the family is reviewed and a key to the world genera is provided. Schizochroa plesiomorphica (Peru), S. minuta (Ecuador), S. ecuadoriensis (Ecuador), Cyamops neotropicus (Peru), C. australicus (Queensland), and Planinasus venezuelensis (Venezuela) are described as new.Family Odiniidae. The classification of the family is reviewed and a key to the subfamilies and the world genera is provided. Two new species of Schildomyia Malloch, S. peruviana (Peru) and S. trinidadensis, are described. A new genus, Shewellia, is erected for the species S. agromyzina (Peru).Family Heleomyzidae. One new species of Cephodapedon Malloch, C. nigriventer (Chile), is described. The genera Mayomyia Malloch and Cinderella Steyskal are reviewed and placed in this family for the first time. Four species of Cinderella, C. macalpinei (Ecuador), C. pollinosa (Chile), C. hirsuta (Chile), and C. steyskali are described as new.The paper is accompanied by 72 illustrations.

LARVAE OF WATER MITES OF SOME GENERA OF ATURIDAE (PROSTIGMATA: HYGROBATOIDEA) IN NORTH AMERICA WITH COMMENTS ON PHYLOGENY AND CLASSIFICATION OF THE FAMILY

1984 ◽  
Vol 116 (3) ◽  
pp. 307-374 ◽  
Author(s):  
Ian M. Smith
Keyword(s):  
North America ◽  
Comparative Data ◽  
Water Mites ◽  
The Family ◽  
First Time ◽  
Host Associations

AbstractLarvae of species representing 8 genera of the family Aturidae from North America are described, including members of the genera Ljania, Neobrachypoda, Estellacarus, and Aturus for the first time adequately. Larvae of species of Woolastookia, Brachypoda, Axonopsis, and Albia are also described to provide comparative data for these genera. A key to the genera of Aturidae, and preliminary diagnoses for the family, currently accepted subfamilies, and genera are provided based upon larval characters. Information on host associations is reviewed for each taxon. Observations on morphology and host associations of larvae provide the basis for a discussion of the phylogeny of these genera, and a review of the classification of the family.

Phylogeny of the Neotropical genus Gephyrocharax (Characiformes: Characidae: Stevardiinae), with remarks on the tribe Stevardiini

2017 ◽  
Vol 182 (4) ◽  
pp. 808-829 ◽  
Author(s):  
James A Vanegas-Ríos
Keyword(s):  
Sister Group ◽  
Data Matrix ◽  
Morphological Evidence ◽  
Phylogenetic Study ◽  
Adult Males ◽  
Current Definition ◽  
The Family ◽  
Recent Classification ◽  
Definition Of

AbstractStevardiinae, which consists of 326 species and 44 genera, is a monophyletic subfamily within the family Characidae. In a recent classification of the subfamily, the tribe Stevardiini was expanded from three (Corynopoma, Gephyrocharax and Pterobrycon) to six genera by the addition of Chrysobrycon, Hysteronotus and Pseudocorynopoma. However, no morphological evidence has supported this definition of the tribe and the monophyly of Gephyrocharax. To address these issues, a phylogenetic study of most stevardiins focusing on Gephyrocharax was conducted. A data matrix including 532 characters and 213 taxa (73 stevardiines, 19 of which were stevardiins) was processed using maximum parsimony in TNT 1.5. All characters were analysed under extended implied weighting, exploring 21 k values. A strict consensus (comprising the most stables trees obtained) was used as the final topology. The results support the current definition of Stevardiini, as well as the monophyly of Chrysobrycon, Gephyrocharax and Pterobrycon. Corynopoma was obtained as the sister group of Gephyrocharax, the latter being phylogenetically diagnosed by two synapomorphies associated with caudal-fin morphology of adult males. The following interspecific relationships within Gephyrocharax are hypothesised: (G. martae ((G. chocoensis (G. major (G. atracaudatus, G. intermedius))) (G. venezuelae (G. sinuensis (G. valencia (G. caucanus (G. melanocheir, G. torresi)))))))).

Sign in / Sign up

Export Citation Format

Share Document