Evaluation of irradiance metrics with respect to predicting sapling growth

2007 ◽  
Vol 37 (7) ◽  
pp. 1203-1213 ◽  
Author(s):  
Richard K. Kobe ◽  
Leah J. Hogarth
Keyword(s):  
Acer Saccharum ◽  
Sugar Maple ◽  
Photosynthetic Photon Flux Density ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Canopy Openness ◽  
Beam Radiation ◽  
White Ash ◽  
Sapling Growth ◽  
Efficient Measurement

Accurate and efficient measurement of photosynthetically active radiation (PAR) is critical in ecological studies. We evaluated 25 metrics of PAR with respect to predicting growth of sugar maple ( Acer saccharum Marsh.) and white ash ( Fraxinus americana L.) saplings from understory to large gap conditions. PAR metrics were derived from gallium arsenide photodiodes, hemispherical canopy photographs (film and digital), and a LI-COR LAI-2000 plant canopy analyzer. In general, percent canopy openness, estimated with film photographs or LAI-2000, best predicted growth. Mean daily photosynthetic photon flux density (PPFD) from photodiodes ranked intermediate; direct beam radiation (from digital and film photographs) was among the poorest growth predictors. Metrics that integrate direct radiation may be relatively poor predictors of growth, because sunflecks were above PPFD levels at which photosynthesis saturates but fully contributed to the calculation of mean daily PPFD. Mean daily PPFD based on truncated sunflecks (to PPFD levels at which photosynthesis saturates) improved predictions of white ash radial growth. Film canopy photographs and the LAI-2000 had relatively low measurement error (indicated by repeatability). High contrast in film photographs, compared to digital, reduced ambiguity in manual thresholding. From a plant-centered perspective, percent canopy openness measured with either the LAI-2000 or film hemispherical photographs provided the best growth predictions.

scholarly journals Evaluation of several measures of canopy openness as predictors of photosynthetic photon flux density in deeply shaded conifer-dominated forest understory

1999 ◽  
Vol 29 (9) ◽  
pp. 1438-1444 ◽  
Author(s):  
José-Luis Machado ◽  
Peter B Reich
Keyword(s):  
Flux Density ◽  
Photosynthetic Photon Flux Density ◽  
Forest Understory ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Canopy Openness ◽  
Photosynthetic Photon Flux ◽  
Low Light ◽  
Light Gradient ◽  
Hemispherical Photograph

The ability to accurately estimate light levels in shaded environments is important for understanding plant adaptations to shade. This study evaluates the effectiveness of three rapid methods of estimating the long-term integrated percentage of above-canopy photosynthetic photon flux density (PPFD) in a deeply shaded conifer-dominated forest understory. These methods included (i) hemispherical canopy photography, (ii) hemispherical sensors (LAI-2000), and (iii) instantaneous %PPFD. Transmitted PPFD was continuously measured starting in June and ending in November using photodiodes at 60 measurement points ranging from 1 to 50% PPFD. Measurements from all methods were positively and linearly related to the mean daily %PPFD measured for two different periods of the year (foliage on and foliage off). However, the strength of the relationship and closeness to a 1:1 fit was weaker for the hemispherical photograph technique. During the foliage-on period, the hemispherical sensor (LAI-2000) explained 90% of the variation in mean daily %PPFD, while the instantaneous %PPFD and hemispherical photography explained 88 and 67%, respectively. Moreover, when examining low-light conditions only (<6 %PPFD), hemispherical photographs failed to detect differences in %PPFD, while the other two techniques were nearly as effective in low light as across the entire light gradient.

Comparing indices of understory light availability between hemlock and hardwood forest patches

2009 ◽  
Vol 39 (10) ◽  
pp. 1949-1957 ◽  
Author(s):  
Michael F. Tobin ◽  
Peter B. Reich
Keyword(s):  
Sugar Maple ◽  
Forest Canopy ◽  
Light Availability ◽  
Canopy Structure ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Canopy Openness ◽  
Forest Patches ◽  
Two Indices

We evaluated whether two indices of light availability resolved differences among microsites within deeply shaded understories (<12% of above-canopy photosynthetic photon flux density (PPFD)) and also whether marked differences in forest canopy structure affected how the two indices related to direct measures of incident photosynthetically active radiation (PAR). Incident PAR was measured with gallium–arsenide–phosphide photodiodes at numerous points in two adjacent forest patches in Michigan, USA: one dominated by the evergreen conifer eastern hemlock ( Tsuga canadensis (L.) Carrière), and the other by the deciduous hardwood sugar maple ( Acer saccharum Marsh.). The two indices tested were canopy openness, measured with the LI-COR LAI-2000 plant canopy analyzer, and the percentage of above-canopy PPFD measured in the understory during overcast conditions (%PPFD). Canopy openness and %PPFD did not effectively predict the long-term mean of daily PPFD. However, both indices reliably predicted the long-term mean of daily median PPFD, an alternative standard of directly measured incident PAR that reduces the relative contribution of sunflecks. The relationships of both indices with mean daily median PPFD differed between hemlock and hardwood patches. Hence, the effect of canopy structure should be considered when using these indices to draw conclusions about differences in light availability between forest patches, particularly when narrow ranges of light availability in deep shade are important.

scholarly journals LED Illumination Spectrum Manipulation for Increasing the Yield of Sweet Basil (Ocimum basilicum L.)

Plants ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 344
Author(s):  
Md Momtazur Rahman ◽  
Mikhail Vasiliev ◽  
Kamal Alameh
Keyword(s):  
Growth Rate ◽  
Fold Increase ◽  
Photosynthetic Photon Flux Density ◽  
Ocimum Basilicum ◽  
Photon Flux ◽  
Photon Flux Density ◽  
White Led ◽  
Experimental Conditions ◽  
Sweet Basil ◽  
Optimal Illumination

Manipulation of the LED illumination spectrum can enhance plant growth rate and development in grow tents. We report on the identification of the illumination spectrum required to significantly enhance the growth rate of sweet basil (Ocimum basilicum L.) plants in grow tent environments by controlling the LED wavebands illuminating the plants. Since the optimal illumination spectrum depends on the plant type, this work focuses on identifying the illumination spectrum that achieves significant basil biomass improvement compared to improvements reported in prior studies. To be able to optimize the illumination spectrum, several steps must be achieved, namely, understanding plant biology, conducting several trial-and-error experiments, iteratively refining experimental conditions, and undertaking accurate statistical analyses. In this study, basil plants are grown in three grow tents with three LED illumination treatments, namely, only white LED illumination (denoted W*), the combination of red (R) and blue (B) LED illumination (denoted BR*) (relative red (R) and blue (B) intensities are 84% and 16%, respectively) and a combination of red (R), blue (B) and far-red (F) LED illumination (denoted BRF*) (relative red (R), blue (B) and far-red (F) intensities are 79%, 11%, and 10%, respectively). The photosynthetic photon flux density (PPFD) was set at 155 µmol m−2 s−1 for all illumination treatments, and the photoperiod was 20 h per day. Experimental results show that a combination of blue (B), red (R), and far-red (F) LED illumination leads to a one-fold increase in the yield of a sweet basil plant in comparison with only white LED illumination (W*). On the other hand, the use of blue (B) and red (R) LED illumination results in a half-fold increase in plant yield. Understanding the effects of LED illumination spectrum on the growth of plant sweet basil plants through basic horticulture research enables farmers to significantly improve their production yield, thus food security and profitability.

scholarly journals Plant buffering against the high-light stress-induced accumulation of CsGA2ox8 transcripts via alternative splicing to finely tune gibberellin levels and maintain hypocotyl elongation

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Bin Liu ◽  
Shuo Zhao ◽  
Pengli Li ◽  
Yilu Yin ◽  
Qingliang Niu ◽  
...  
Keyword(s):  
Alternative Splicing ◽  
Light Intensity ◽  
Intron Retention ◽  
Light Stress ◽  
Photosynthetic Photon Flux Density ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Rna Seq ◽  
Multiple Transcripts ◽  
Novel Transcript

AbstractIn plants, alternative splicing (AS) is markedly induced in response to environmental stresses, but it is unclear why plants generate multiple transcripts under stress conditions. In this study, RNA-seq was performed to identify AS events in cucumber seedlings grown under different light intensities. We identified a novel transcript of the gibberellin (GA)-deactivating enzyme Gibberellin 2-beta-dioxygenase 8 (CsGA2ox8). Compared with canonical CsGA2ox8.1, the CsGA2ox8.2 isoform presented intron retention between the second and third exons. Functional analysis proved that the transcript of CsGA2ox8.1 but not CsGA2ox8.2 played a role in the deactivation of bioactive GAs. Moreover, expression analysis demonstrated that both transcripts were upregulated by increased light intensity, but the expression level of CsGA2ox8.1 increased slowly when the light intensity was >400 µmol·m−2·s−1 PPFD (photosynthetic photon flux density), while the CsGA2ox8.2 transcript levels increased rapidly when the light intensity was >200 µmol·m−2·s−1 PPFD. Our findings provide evidence that plants might finely tune their GA levels by buffering against the normal transcripts of CsGA2ox8 through AS.

scholarly journals Effects of Light Quality on the Chlorophyll Degradation Pathway in Rice Seedling Leaves

2016 ◽  
Vol 44 (2) ◽  
pp. 393-398
Author(s):  
Chang-Chang CHEN ◽  
Kuan-Hung LIN ◽  
Meng-Yuan HUANG ◽  
Wen-Dar HUANG ◽  
Chi-Ming YANG
Keyword(s):  
Light Quality ◽  
Protoporphyrin Ix ◽  
Degradation Pathway ◽  
Photosynthetic Photon Flux Density ◽  
Rice Seedling ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Rice Seedlings ◽  
Rice Varieties ◽  
Enriched Environments

The objective of this study was to investigate the dynamics of chlorophyll (Chl), biosynthetic intermediates (protoporphyrin IX, magnesium protoporphyrin IX, and protochlorophyllide), degradation intermediates [chlorophyllide (Chlide), pheophytin (Phe), and pheophorbide (Pho)], and carotenoids (Car) in leaves of rice seedlings. Two rice varieties, 'Taichung Shen 10' ('TCS10') and 'IR1552', were grown under different light quality conditions controlled by light emitting diodes (LED). Lighting treatments for rice seedlings were included by red (R), blue (B), green (G), and red + blue (RB), with fluorescent lighting (FL) as the control and photosynthetic photon flux density being set at 105 µmol m-2 s-1. The results show that lower levels of Chl and Car in leaves were detected under G lighting, and light quality did not mediate porphyrins in biosynthetic pathways. Rice seedling leaves took Chl→Phe→Pho and Chl→Chlide→Pho as the major and minor degradation routes, respectively. Furthermore, higher Phe/Chlide ratios were observed under G and FL lighting conditions, indicating that green-enriched environments can up-regulate the minor degradation route in leaves.

scholarly journals Analyzing the major drivers of NEE in a Mediterranean alpine shrubland

2010 ◽  
Vol 7 (9) ◽  
pp. 2601-2611 ◽  
Author(s):  
B. R. Reverter ◽  
E. P. Sánchez-Cañete ◽  
V. Resco ◽  
P. Serrano-Ortiz ◽  
C. Oyonarte ◽  
...  
Keyword(s):  
Net Ecosystem Exchange ◽  
High Elevation ◽  
Photosynthetic Photon Flux Density ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Precipitation Pattern ◽  
Key Factors ◽  
Cold Temperatures ◽  
Carbon Sequestration Potential ◽  
Sequestration Potential

Abstract. Two years of continuous measurements of net ecosystem exchange (NEE) using the eddy covariance technique were made over a Mediterranean alpine shrubland. This ecosystem was found to be a net source of CO2 (+ 52 ± 7 g C m−2 and + 48 ± 7 g C m−2 for 2007 and 2008) during the two-year study period. To understand the reasons underlying this net release of CO2 into the atmosphere, we analysed the drivers of seasonal variability in NEE over these two years. We observed that the soil water availability – driven by the precipitation pattern – and the photosynthetic photon flux density (PPFD) are the key factors for understanding both the carbon sequestration potential and the duration of the photosynthetic period during the growing season. Finally, the effects of the self-heating correction to CO2 and H2O fluxes measured with the open-path infrared gas analyser were evaluated. Applying the correction turned the annual CO2 budget in 2007 from a sink (− 135 ± 7 g C m−2) to a source (+ 52 ± 7 g C m−2). The magnitude of this change is larger than reported previously and is shown to be due to the low air density and cold temperatures at this high elevation study site.

scholarly journals Estimation of Global and Diffuse Photosynthetic Photon Flux Density under Various Sky Conditions Using Ground-Based Whole-Sky Images

2019 ◽  
Vol 11 (8) ◽  
pp. 932
Author(s):  
Megumi Yamashita ◽  
Mitsunori Yoshimura
Keyword(s):  
Flux Density ◽  
Photosynthetic Photon Flux Density ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Diffuse Component ◽  
Photosynthetic Photon Flux ◽  
Physiological Processes ◽  
Sky Conditions ◽  
Mean Square Errors ◽  
Relative Root

A knowledge of photosynthetic photon flux density (PPFD: μmol m−2 s−1) is crucial for understanding plant physiological processes in photosynthesis. The diffuse component of the global PPFD on a short timescale is required for the accurate modeling of photosynthesis. However, because the PPFD is difficult to determine, it is generally estimated from incident solar radiation (SR: W m−2), which is routinely observed worldwide. To estimate the PPFD from the SR, photosynthetically active radiation (PAR: W m−2) is separated from the SR using the PAR fraction (PF; PAR/SR: unitless), and the PAR is then converted into the PPFD using the quanta-to-energy ratio (Q/E: μmol J−1). In this procedure, PF and Q/E are considered constant values; however, it was reported recently that PF and Q/E vary under different sky conditions. Moreover, the diffuse ratio (DR) is needed to distinguish the diffuse component in the global PAR, and it is known that the DR varies depending on sky conditions. Ground-based whole-sky images can be used for sky-condition monitoring, instead of human-eye interpretation. This study developed a methodology for estimating the global and diffuse PPFD using whole-sky images. Sky-condition factors were derived through whole-sky image processing, and the effects of these factors on the PF, the Q/E of global and diffuse PAR, and the DR were examined. We estimated the global and diffuse PPFD with instantaneous values using the sky-condition factors under various sky conditions, based on which the detailed effects of the sky-condition factors on PF, Q/E, and DR were clarified. The results of the PPFD estimations had small bias errors of approximately +0.3% and +3.8% and relative root mean square errors of approximately 27% and 20% for the global and diffuse PPFD, respectively.

scholarly journals Different LED Light Wavelengths and Photosynthetic Photon Flux Density Effect on Colletotrichum acutatum Growth

Plants ◽  
2022 ◽  
Vol 11 (1) ◽  
pp. 143
Author(s):  
Neringa Rasiukevičiūtė ◽  
Aušra Brazaitytė ◽  
Viktorija Vaštakaitė-Kairienė ◽  
Alma Valiuškaitė
Keyword(s):  
Flux Density ◽  
Photosynthetic Photon Flux Density ◽  
Growth Characteristics ◽  
Colletotrichum Acutatum ◽  
Photon Flux ◽  
Photon Flux Density ◽  
Photosynthetic Photon Flux ◽  
Light Emitting ◽  
Led Light ◽  
Fungus Growth

The study aimed to evaluate the effect of different photon flux density (PFD) and light-emitting diodes (LED) wavelengths on strawberry Colletotrichum acutatum growth characteristics. The C. acutatum growth characteristics under the blue 450 nm (B), green 530 nm (G), red 660 nm (R), far-red 735 nm (FR), and white 5700 K (W) LEDs at PFD 50, 100 and 200 μmol m−2 s−1 were evaluated. The effect on C. acutatum mycelial growth evaluated by daily measuring until five days after inoculation (DAI). The presence of conidia and size (width and length) evaluated after 5 DAI. The results showed that the highest inhibition of fungus growth was achieved after 1 DAI under B and G at 50 μmol m−2 s−1 PFD. Additionally, after 1–4 DAI under B at 200 μmol m−2 s−1 PFD. The lowest conidia width was under FR at 50 μmol m−2 s−1 PFD and length under FR at 100 μmol m−2 s−1 PFD. Various LED light wavelengths influenced differences in C. acutatum colonies color. In conclusion, different photosynthetic photon flux densities and wavelengths influence C. acutatum growth characteristics. The changes in C. acutatum morphological and phenotypical characteristics could be related to its ability to spread and infect plant tissues. This study’s findings could potentially help to manage C. acutatum by LEDs in controlled environment conditions.

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