Identification of novel horA-harbouring bacteria capable of spoiling beer

2008 ◽  
Vol 54 (4) ◽  
pp. 321-325 ◽  
Author(s):  
Monique Haakensen ◽  
Barry Ziola
Keyword(s):  
Drug Resistance ◽  
Bacillus Cereus ◽  
Bacillus Licheniformis ◽  
Staphylococcus Epidermidis ◽  
Multi Drug Resistance ◽  
Bacterial Isolates ◽  
First Finding ◽  
Spoilage Bacteria ◽  
Beer Spoilage ◽  
Respective Species

An ATP-binding cassette (ABC) multi-drug resistance (MDR) gene was found in 4 Gram-positive bacterial isolates of environmental origin and found capable of spoiling beer. The bacteria isolated were Bacillus cereus , Bacillus licheniformis , Paenibacillus humicus , and Staphylococcus epidermidis ; all of which were previously unappreciated as beer-spoilage bacteria. The MDR gene found in these bacteria has less than 37% similarity to known ABC MDR proteins described for Bacillus and Staphylococcus , and this is the first finding of an ABC MDR gene in the genus Paenibacillus . The sequenced region of the gene was translated and compared phylogenetically with the closest GenBank matches of the respective species and the closest GenBank matches overall. The ABC MDR proteins from these isolates were found to cluster among known sequences of HorA, sharing 99.5% identity within the sequenced region. In the beer-spoilage-associated genera Lactobacillus and Pediococcus , the presence of the MDR gene horA correlates with the ability to grow in beer. As the unique horA-harbouring isolates described here are capable of growing in beer, it is likely that the presence of the horA gene likewise confers hop resistance to these organisms.

scholarly journals Prevalence of Extended Spectrum Beta Lactamases (ESBL) and Metallo Beta Lactamases (MBL) Mediated Resistance in Gram Negative Bacterial Pathogens

2018 ◽  
Vol 4 ◽  
pp. 49-54 ◽  
Author(s):  
Pramila Pathak ◽  
Nandalal Jaishi ◽  
Binod Kumar Yadav ◽  
Pradeep Kumar Shah
Keyword(s):  
Drug Resistance ◽  
Hospital Setting ◽  
Multi Drug Resistance ◽  
Microbiological Analysis ◽  
Bacterial Isolates ◽  
Biochemical Tests ◽  
Gram Negative ◽  
Beta Lactamases ◽  
Clinical Specimens ◽  
Extended Spectrum

Objectives: This study was conducted to determine the prevalence of multi-drug resistance (MDR) along with Extended Spectrum β-lactamase (ESBL) and Metallo β-lactamase (MBL) producing gram negative bacterial isolates among the patients attending Shahid Gangalal National Heart Centre, Kathmandu, Nepal.Methods: This cross-sectional study was carried out from June to December; 2016. Altogether 977 clinical specimens were processed for analysis of bacteriological profile and the isolates were identified by culture, morphological and biochemical tests. Antibiotic susceptibility testing of the isolates was performed by Kirby Bauer disc diffusion methods following Clinical and Laboratories Standard Institute guideline and the isolates were tested for ESBL and MBL by combined disk method.Results: out of 977 clinical specimens, 254 (25.99%) were found to be gram negative bacterial isolates, among them Klebsiella pneumoniae 83 (32.67%) was the most predominant organism followed by E. coli 51 (20.07%), Pseudomonas aeruginosa 36 (14.17%), K. oxytoca 32 (12.59%), Proteus mirabilis 13 (5.11%) and P. vulgaris 13 (5.11%), Acinetobacter spp. 11 (4.33%), Citrobacter spp. 10 (3.93%) and Enterobacter spp. 5 (1.96%) respectively. 83 (32.67%) isolates were found to be MDR, 38(14.96%) were positive for ESBL while 19 (7.48%) were MBL producer.Conclusion: The determent drug resistance among ESBL and MBL producers, reflect the extensive use of antibiotics possessing difficulties in therapeutic potions in hospital setting which might be overcome by proper microbiological analysis of pathogenic isolates and judicious use of antibiotics for emergence of resistance strains.

scholarly journals Antibiotic susceptibility profile of bacterial pathogens isolated from febrile children under 5 years of age in Nanoro, Burkina Faso.

2020 ◽  
Author(s):  
Massa dit Achille BONKO ◽  
Marc Christian Tahita ◽  
Francois Kiemde ◽  
Palpouguini Lompo ◽  
Sibidou Yougbaré ◽  
...  
Keyword(s):  
Drug Resistance ◽  
Burkina Faso ◽  
Antibiotic Susceptibility ◽  
Bacterial Species ◽  
Penicillin G ◽  
Multi Drug Resistance ◽  
Bacterial Isolates ◽  
Study Region ◽  
Clinical Specimens ◽  
Children Under 5

Abstract Background: The curative power of antimicrobials is severely threatened due to emerging resistance to first-line antibiotics worldwide. With a limited reserve of antibiotics, increasing antimicrobial resistance has become a global concern, but there is a paucity of such data in Burkina Faso, and the West African region in general. Therefore, this study aims to determine the antibiotic susceptibility profile of bacterial species isolated from febrile children under 5 years of age in Nanoro (Burkina Faso). Methods: Clinical specimens (blood, stool, and urine) were collected from 1099 febrile children attending the peripheral health facilities and the referral hospital in Nanoro. Bacterial isolates from these clinical specimens were assessed for their susceptibility against commonly used antibiotics by standard disc diffusion procedure and minimal inhibitory concentration method (when appropriate). Results: In total, 141 bacterial strains were recovered from 127 febrile children of which 65 strains were isolated from blood, 65 from the stool, and 11 from urine. Predominant bacterial isolates were Salmonella species (56.7%; 80/141) followed by Escherichia coli (33.3%; 47/141). Antibiotic susceptibility testing revealed Salmonella species were highly resistant to ampicillin (70%; 56/80), trimethoprim-sulfamethoxazole (65%; 52/80), and chloramphenicol (63.8%; 51/80). E. coli isolates were highly resistant to trimethoprim-sulfamethoxazole (100%), ampicillin (100%), ciprofloxacin (71.4%; 10/14), amoxicillin-clavulanate (64.3%; 9/14), ceftriaxone (64.3%; 9/14), and gentamycin (50%; 7/14). Moreover, 7 out of 14 E. coli isolates were producers of the ß-lactamase enzyme, suggesting multi-drug resistance against b-lactam as well as non-b-lactam antibiotics. S. pneumoniae isolates were fully resistant to tetracycline and 50% to penicillin G. Multi-drug resistance was observed in 54.6% (59/108) of the isolates of which 56 (54.9%) were Gram-negative bacteria and 3 (50.0%) Gram-positive bacteria.Conclusions: The antibiotic susceptibility profiling showed an alarming high resistance to commonly used antibiotics to treat bacterial infections in the study region. The work prompts the need to expand antibiotic resistance surveillance studies in Burkina Faso, and probably the whole region (West Africa). Moreover, it implies the need of a revision of the antibiotic-treatment guidelines by the Ministry of Health in Burkina Faso to avoid further development of resistance.

scholarly journals Antibiotic susceptibility profile of bacterial pathogens isolated from febrile children under 5 years of age in Nanoro, Burkina Faso

2020 ◽  
Author(s):  
Massa dit Achille BONKO ◽  
Marc Christian Tahita ◽  
Francois Kiemde ◽  
Palpouguini Lompo ◽  
Sibidou Yougbaré ◽  
...  
Keyword(s):  
Drug Resistance ◽  
Burkina Faso ◽  
Antibiotic Susceptibility ◽  
Bacterial Species ◽  
Penicillin G ◽  
Multi Drug Resistance ◽  
Bacterial Isolates ◽  
Study Region ◽  
Clinical Specimens ◽  
Children Under 5

Abstract Background: The curative power of antimicrobials is severely threatened due to emerging resistance to first-line antibiotics worldwide. With a limited reserve of antibiotics, increasing antimicrobial resistance has become a global concern, but there is a paucity of such data in Burkina Faso, and the West African region in general. Therefore, this study aims to determine the antibiotic susceptibility profile of bacterial species isolated from febrile children under 5 years of age in Nanoro (Burkina Faso). Methods: Clinical specimens (blood, stool, and urine) were collected from 1099 febrile children attending the peripheral health facilities and the referral hospital in Nanoro. Bacterial isolates from these clinical specimens were assessed for their susceptibility against commonly used antibiotics by standard disc diffusion procedure and minimal inhibitory concentration method (when appropriate). Results: In total, 141 bacterial strains were recovered from 127 febrile children of which 65 strains were isolated from blood, 65 from the stool, and 11 from urine. Predominant bacterial isolates were Salmonella species (56.7%; 80/141) followed by Escherichia coli (33.3%; 47/141). Antibiotic susceptibility testing revealed Salmonella species were highly resistant to ampicillin (70%; 56/80), trimethoprim-sulfamethoxazole (65%; 52/80), and chloramphenicol (63.8%; 51/80). E. coli isolates were highly resistant to trimethoprim-sulfamethoxazole (100%), ampicillin (100%), ciprofloxacin (71.4%; 10/14), amoxicillin-clavulanate (64.3%; 9/14), ceftriaxone (64.3%; 9/14), and gentamycin (50%; 7/14). Moreover, 7 out of 14 E. coli isolates were producers of the ß-lactamase enzyme, suggesting multi-drug resistance against b-lactam as well as non-b-lactam antibiotics. S. pneumoniae isolates were fully resistant to tetracycline and 50% to penicillin G. Multi-drug resistance was observed in 54.6% (59/108) of the isolates of which 56 (54.9%) were Gram-negative bacteria and 3 (50.0%) Gram-positive bacteria.Conclusions: The antibiotic susceptibility profiling showed an alarming high resistance to commonly used antibiotics to treat bacterial infections in the study region. The work prompts the need to expand antibiotic resistance surveillance studies in Burkina Faso, and probably the whole region (West Africa).

scholarly journals Bacterial profile and multi-drug resistance pattern of bacterial isolates among septicemia suspected cases: a meta-analysis report in Ethiopia

2021 ◽  
Vol 45 (3) ◽  
pp. 167-178
Author(s):  
Mengistu Abayneh ◽  
Shewangizaw HaileMariam ◽  
Molla Asnake
Keyword(s):  
Drug Resistance ◽  
Blood Culture ◽  
Meta Analysis ◽  
Multi Drug Resistance ◽  
Resistance Pattern ◽  
Bacterial Isolates ◽  
Gram Positive ◽  
Gram Negative ◽  
Drug Resistance Pattern ◽  
Culture Positive

Abstract Background Bloodstream infections (BSIs) are one of the most common infections seen in all age groups and in all locations. The current knowledge on the patterns of bacterial profile, and its antibiotic resistance are essential to design and implement appropriate interventions. This study was conducted to assess the prevalence and multi-drug resistance pattern of bacterial isolates among septicemia and/or bacteremia suspected cases in Ethiopia. Methods Searching was conducted in databases of PubMed, Research Gate, Scopus and Google Scholar. In addition, manual searching is also conducted in bibliographies of included studies and in other meta-analysis studies. Required data were extracted from articles published up to 2020 on the bacterial profile of septicemia in Ethiopia, and analyzed using comprehensive meta-analysis version 3.3.0 software. Results A total of 5,823 septicemia suspected cases were extracted from 18 included studies and the overall blood culture positive rate of 31.9% (95% CI: 0.261–0.382). Of these, the overall Gram positive and Gram negative isolates was 57.8% (95% CI: 0.534–0.584) and 42.2% (95% CI: 0.416–0.466), respectively. Among Gram positives, predominantly reported isolates was Staphylococcus  aureus (47.9%: 480 of 1,003), followed by Coagulase-Negative Staphylococcus (42.7%: 428 of 1,003), whereas among Gram negatives, the most frequently reported isolates was Klebsiella species (29.8%: 218 of 731), followed by Escherichia  coli (23.1%: 169 of 731). Significant levels of resistance was reported against ampicillin, amoxicillin, ceftriaxone, co-trimoxazole and tetracycline with a pooled resistance range of 40.6–55.3% in Gram positive and 52.8–85.7% in Gram negative isolates. The pooled estimates of multi-drugs resistance (MDR) was (66.8%) among Gram positives and (80.5%) among Gram negatives, with the overall MDR rate of (74.2%). Conclusions The reported blood culture positive rates among septicemia cases were relatively high. Second, the level of drug and multi-drug resistant isolates against commonly prescribed antibiotics was significant. However, the scarcity of data on culture confirmed septicemia cases as well as patterns of antimicrobial resistance may overshadow the problem.

scholarly journals Bacterial Isolates from Bivalve Clams (Galatea paradoxa, Born 1778): Occurence, Multi-drug Resistance, Location of Antibiotic Resistance Marker and Plasmid Profiles

2020 ◽  
pp. 35-46
Author(s):  
M. U. Okon ◽  
C. U. Inyang ◽  
O. J. Akinjogunla
Keyword(s):  
Drug Resistance ◽  
Antibiotic Resistance ◽  
Plasmid Dna ◽  
Gel Electrophoresis ◽  
Multi Drug Resistance ◽  
Agarose Gel ◽  
Agarose Gel Electrophoresis ◽  
Bacterial Isolates ◽  
Salmonella Spp ◽  
Galatea Paradoxa

The occurrence of bacterial isolates in Galatea paradoxa (Born 1778) was determined using standard bacteriological method. The multi-drug resistance, location of antibiotic markers, plasmid DNA extraction and electrophoresis was determined by disc diffusion, acridine orange, TENS alkaline lysis and 0.8% agarose gel electrophoresis, respectively. Of the 63 bacterial isolates from G. paradoxa, Staphylococcus aureus and Streptococcus pyogenes had the highest and lowest percentage of occurrence with 40.0% and 5.0%, respectively. Escherichia coli was 25.0%, Pseudomonas aeruginosa (17.5%), Enterococcus spp and Salmonella spp (15.0%) each, Bacillus subtilis (12.5%), Klebsiella pneumoniae and Enterococcus faecalis (10.0%) each while Vibrio cholerae was (7.5%). The results showed Streptomycin and Ciprofloxacin as the most effective antibiotics against bacterial isolates from G. paradoxa. Bacillus subtilis and P. aeruginosa displayed 100% sensitivity to Streptomycin; Salmonella spp and E. faecalis were 100% sensitive to Augmentin. V. cholerae and S. pyogenes showed 100% resistance to Penicillin and Rifampicin, respectively. Of the 63 bacterial isolates, 43 (68.3%) were multidrug resistant (MDR) isolates, of which S. aureus and E. coli had the widest multiple antibiotic resistance (MAR) indices ranging from 0.3 to 0.8, while S. pyogenes had the least MAR ≤ 0.5. Of the 43 MDR bacterial isolates, 16.3%, 23.3% and 60.5% had their entire antibiotic resistance encoded on plasmid, chromosome and both plasmid and chromosome, respectively. The agarose gel electrophoresis showed that MDR bacterial isolates from G. paradoxa had plasmid DNA with molecular weights ranging from 23.1 to 31.5kb. This study has showed that G. paradoxa harboured bacteria which could pose serious health risks and G. paradoxa should be adequately cooked before consumption.

scholarly journals Multi Drug Resistance Bacterial Isolates of Surgical Site Infection

2014 ◽  
Vol 04 (04) ◽  
pp. 203-209 ◽  
Author(s):  
Chandra Prakash Bhatt ◽  
Rina Baidya ◽  
Prakash Karki ◽  
Rikesh Kumar Shah ◽  
Rashiak Miya ◽  
...  
Keyword(s):  
Drug Resistance ◽  
Surgical Site Infection ◽  
Multi Drug Resistance ◽  
Site Infection ◽  
Bacterial Isolates
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