Topologically partitioned dynamic polarizabilities using the theory of atoms in molecules

1996 ◽  
Vol 74 (6) ◽  
pp. 976-987 ◽  
Author(s):  
Christof Hättig ◽  
Bernd A. Hebβ ◽  
Georg Jansen ◽  
János G. Ángyán

Frequency-dependent distributed polarizabilities have been determined from time-dependent Hartree–Fock calculations, using the partitioning of the molecular space suggested by Bader's topological theory of atoms in molecules. The basis set dependence of the distributed dynamic polarizabilities is analyzed in terms of the first few Cauchy moments, for the carbon monoxide, water, cyanogen, urea and benzene molecules. Two alternative relocalization schemes have been considered in order to reduce the number of distributed dynamic polarizability parameters. The first one, closely related to the atomic polarizability model of Bader, leads to atomic charge–dipole and dipole–dipole polarizabilities, describing the response of the molecular charge distribution to a uniform external field, in terms of atomic charges and dipoles. The second scheme, similar to that suggested by Stone, retains the fully distributed description of the dynamic charge-flow polarizabilities, while all two-center dipole–dipole and charge–dipole contributions are condensed in one-center dynamic dipole–dipole polarizabilities. Key words: Bader-partitioning, distributed dynamic polarizabilities, Cauchy-moments, benzene, polarizability of; urea, polarizability of.

2014 ◽  
Vol 47 (4) ◽  
pp. 1452-1458 ◽  
Author(s):  
Anna Krawczuk ◽  
Daniel Pérez ◽  
Piero Macchi

This paper describes the program PolaBer, which calculates atomic polarizability tensors from electric field perturbations of a partitioned electron density distribution. Among many possible partitioning schemes, PolaBer is currently using the quantum theory of atoms in molecules and it is interfaced to programs that apply such a partitioning. The calculation of the atomic tensors follows the idea suggested by Keith [The Quantum Theory of Atoms in Molecules: From Solid State to DNA and Drug Design, (2007), edited by C. F. Matta & R. J. Boyd. Weinheim: Wiley-VCH], which enables the removal of the intrinsic origin dependence of the atomic charge contributions to the molecular dipole moment. This scheme allows the export, within chemically equivalent functional groups, of properties calculated from atomic dipoles, such as for example the atomic polarizabilities. The software permits visualization of the tensors and calculation of straightforward optical properties of a molecule (like the molar refractive index) or a crystal (assuming the molecule in a given crystal lattice).


1968 ◽  
Vol 46 (6) ◽  
pp. 953-966 ◽  
Author(s):  
R. F. W. Bader ◽  
A. K. Chandra

The process of bond formation as a function of internuclear separation for H2 and Li2 is interpreted in terms of the changes in the charge distributions and the forces which they exert on the nuclei. The charge distributions are calculated from extended Hartree–Fock wave functions which reduce to the Hartree–Fock atomic functions for infinite nuclear separation. The results for H2 indicate that at separations greater than 5 a.u. the net attractive force exerted on the approaching nuclei arises from a simultaneous inwards polarization of the atomic charge distributions. For separations less than 5 a.u. the nuclei are bound by the force exerted by the delocalized component of the charge distribution. The density distributions and forces for He2 over a range of internuclear separations are compared with those for H2 to contrast the formation of stable and unstable molecular species in terms of their respective charge distributions.The final section of the paper examines in detail the changes in the Hartree–Fock molecular charge distribution which arise from the inclusion of electron correlation in the wave function. The maximum error in the Hartree–Fock charge distribution for H2 is found to be in the region between the nuclei, where it overestimates the charge density by approximately 1%. The errors in the Hartree–Fock charge distribution for Li2 are found to be of the same order of magnitude as the uncertainty in the calculated density distribution itself.


2017 ◽  
Vol 35 (3) ◽  
pp. 560-575
Author(s):  
Mehmet Kara ◽  
Meryem Evecen ◽  
Telhat Özdogan

AbstractHartree-Fock and Density Functional Theory (B3LYP, B3PW91) calculations for the ground state of (3-Oxo-3Hbenzo[ f]chromen-1-yl) methyl N,N-dimethylcarbamodithioate have been presented and the calculated structural parameters and energetic properties have been compared with the available X-ray diffraction data. The vibrational frequencies have been calculated using optimized geometry of the molecule. The conformational properties of the molecule have been determined by computing molecular energy properties, in which torsional angle varied from -180° to +180° in steps of 10°. Moreover, natural bond orbital analysis and atomic charge analysis have been performed. Besides, HOMO and LUMO energies have been calculated and their pictures have been presented. Finally, molecular electrostatic potential and thermodynamic properties have been calculated. It is seen that the obtained theoretical results agree well with the available experimental values. In all the calculations, except for optimization and vibrational calculations, B3LYP level of theory with 6-311++G(d,p) basis set has been used.


2016 ◽  
Vol 69 (9) ◽  
pp. 975 ◽  
Author(s):  
Anmol Kumar ◽  
Shridhar R. Gadre

The Atoms in Molecules (AIM) concept based on the zero-flux surface (ZFS) of the gradient of molecular electrostatic potential (MESP) has been recently proposed by the present authors. The nature of MESP-based atomic basins brings out the asymmetric electronic distribution in a molecule. An electron-rich atom among the two bonded atoms is seen to possess a completely closed MESP-based atomic basin. The present article illustrates the nature of atomic basins for a variety of molecules such as BF, BH3, AlCl3, B2H6, and Al2Cl6, and a Lewis acid–base pair, viz. NH3BH3 wherein the electronic distribution is not merely guided by difference in the electronegativity of the atoms. The study also explores some transition metal complexes, viz. Ni(CO)4, Fe(CO)5, Cr(CO)6, Mn2(CO)10, Co2(CO)8, Fe(η5-C5H5)2, Co(η3-C3H5), and Co(η3-C3H5)(CO)3, which show a similar phenomenon of intricate charge transfer among the ligands and the metal centre. The present article employs MESP-based AIM for a qualitative explanation of the shielding or deshielding effects revealed by NMR data as well as susceptibility of an atomic region towards an electrophilic or nucleophilic attack. Because the topographical features of MESP and thus the nature of atomic basins are not very sensitive to the level of theory and basis set, the present article demonstrates the capability of MESP as a consistent and simple tool for the portrayal of asymmetry in molecular charge distribution.


1999 ◽  
Vol 597 ◽  
Author(s):  
Steven Trohalaki ◽  
Robert J. Zellmer ◽  
Ruth Pachter

AbstractSpangler and He [1,2] have shown that dithienyl polyenes form extremely stable bipolaronic dications when oxidatively doped in solution. Previous theoretical studies applied empirical methods to predict bipolaronic enhancement of hyperpolarizabilities for simple polyenes [3,4]. Here, we employ density functional theory to optimize the gas-phase molecular conformations of neutral, cationic, and dicationic forms of a series of dithienyl polyenes, where the number of ethene units, N, is varied from 1–5. Ab initio Hartree-Fock, generalized valence bond, configuration interaction, and Møller-Plesset calculations demonstrate that the dications are farily well described with a closed shell and therefore have little biradicaloid character. Second hyperpolarizabilities, γ, are subsequently calculated using ab initio Hartree-Fock theory and a finite field methodology. As expected, γ increases with the number of ethene units for a given molecular charge. The cations also show the largest increase in γ with N. For a given value of N, the cations display the largest γ values. However, if we treat the dication as a triplet, which might be present in solution, then it displays the largest γ.


1999 ◽  
Vol 59 (1) ◽  
pp. R1-R4 ◽  
Author(s):  
E. Benichou ◽  
R. Antoine ◽  
D. Rayane ◽  
B. Vezin ◽  
F. Dalby ◽  
...  

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