Relativistic compact effective potentials and efficient, shared-exponent basis sets for the third-, fourth-, and fifth-row atoms

1992 ◽  
Vol 70 (2) ◽  
pp. 612-630 ◽  
Author(s):  
Walter J. Stevens ◽  
Morris Krauss ◽  
Harold Basch ◽  
Paul G. Jasien

Relativistic compact effective potentials (RCEP), which replace the atomic core electrons in molecular calculations, have been derived from numerical Dirac–Fock atomic wavefunctions using shape-consistent valence pseudo-orbitals and an optimizing procedure based on an energy-overlap functional. Potentials are presented for the third-, fourth-, and fifth-row atoms of the Periodic Table (excluding the lanthanide series). The efficiency of molecular calculations is enhanced by using compact Gaussian expansions (no more than three terms) to represent the radial components of the potentials, and energy-optimized, shared-exponent, contracted-Gaussian atomic orbital basis sets. Transferability of the potentials has been tested by comparing calculated atomic excitation energies and ionization potentials with values obtained from numerical relativistic Hartree–Fock calculations. For the alkali and alkaline earth atoms, core polarization potentials (CPP) have been derived which may be added to the RCEP to make possible accurate molecular calculations without explicitly including core-valence correlating configurations in the wavefunction. Keywords: model potentials, effective core potentials, transition metals, relativistic calculations.

2010 ◽  
Vol 7 (3) ◽  
pp. 260-272
Author(s):  
M. Monajjemi ◽  
A. Nouri ◽  
H. Monajemi

The hydrogen bonding effects that were produced from interaction of membrane lipid dipalmitoylphosphatidyl-ethanolamine (DPPE) with 1-5 water molecules, has been theoretically  investigated through the quantum mechanical calculations at the Hartree-Fock level of theory and the 3-21G, 6-31G and 6-31G* basis sets with the computational package of Gaussian 98. According to the obtained results of the structural optimization of the isolated DPPE in the gas phase, we can see the evidences of interactions in the head group of this macromolecule (from the molecular point of view we have a proton transfer from the ammonium group to the phosphate oxygen of zwitterionic form. As we know that the hydrogen bonding of DPPE with water molecules which have surrounded its head group plays an important role in the permeability of DPPE. So, in order to understand the microscopic physico-chemical nature of this subject we have analyzed bond and torsion angles of DPPE before and after added water molecules.  In this paper we have theoretically studied the complexes DPPE with water molecules which have surrounded its head group. As mentioned before, this theoretically study has been done through Hartree-Fock level of theory by using simple basis sets. Theoretical data shows that the interaction of head group of DPPE with water molecules causes some changes in the geometry of DPPE which were explained by the contribution of zwitterionic form of DPPE macromolecule, and finally hydrated DPPE becomes stable complex. Comparison between theoretical and experimental geometry data of DPPE macromolecule shows that the calculation at the HF/3-21 level of theory produces results which they are in better agreement with the experimental data. Moreover the hydrogen bonding effects on the NMR shielding tensor of selected atoms in the hydrated complexes of DPPE were reported. The ";Gauge Including Atomic Orbitals"; (GIAO) approaches within the SCF-Hartree-Fock approximation have been used in order to investigate the influence of hydrogen bonding of DPPE-water complex on the shielding tensors. Finally, the solvent affects on the stability of DPPE macromolecule, dipole moment and atomic charge of some selected atoms of DPPE molecule was discussed using Onsager model and Merz-Singh-Kolman schema.   Keywords  : Gauge Including Atomic Orbital, DPPE, hydrogen bonding, solvation, quantum mechanics, ab initio


Author(s):  
Amanda Ribeiro Guimaraes ◽  
Rugles César Barbosa ◽  
Ana Cristina Tello Mora ◽  
Aldineia Pereira da Silva ◽  
Júlia Maria Aragon Alves ◽  
...  

The polynomial Generator Coordinate Hartree-Fock Gaussian basis sets, pGCHF, for the atoms Na, Mg, Al, Si, P, S, and Cl were generated using the generator coordinate method based on polynomial...


2004 ◽  
Vol 82 (8) ◽  
pp. 1237-1243
Author(s):  
M T Barreto ◽  
A Canal Neto ◽  
F E Jorge

The improved generator coordinate Hartree–Fock method is used to generate Gaussian basis sets for low-lying excited states of neutral atoms from He (Z = 2) to Kr (Z = 36). Then, excitation energies and orbital energies of the outermost orbitals of each symmetry are calculated and compared with the corresponding values obtained with numerical Hartree–Fock calculations. Besides this, the basis sets for Be (3P) and F (2P) are contracted by a standard procedure and, then, enriched with polarization functions. From these basis sets, total energies, dissociation energy, and bond length for BeF are calculated and compared with results obtained with other basis sets and with experimental values. The sets for He–Kr are useful in constructing basis sets for molecular calculations. Key words: improved generator coordinate Hartree–Fock method, Gaussian basis sets, low-lying excited states, neutral atoms.


2001 ◽  
Vol 115 (8) ◽  
pp. 3561-3565 ◽  
Author(s):  
Toshikatsu Koga ◽  
Hiroshi Tatewaki ◽  
Osamu Matsuoka

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