Hydrolysis of a monocyclic oxyphosphorane containing a five-membered ring

1991 ◽  
Vol 69 (12) ◽  
pp. 2075-2083 ◽  
Author(s):  
Glenn H. McGall ◽  
Robert A. McClelland
Keyword(s):  
Rate Constant ◽  
Methoxy Group ◽  
Ring Closure ◽  
Rate Limiting Step ◽  
Acid Base Equilibrium ◽  
Reaction With Water ◽  
Effective Molarity ◽  
Rate Limiting ◽  
Hydrolysis Of ◽  
Good Agreement

A kinetic study is reported for the hydrolysis of 2,2-diphenyl-2-methoxy-1,3,2-dioxaphospholane 1. This phosphorane exists in aqueous solution in a pseudo acid–base equilibrium with an observable phosphonium ion, the ring-opened (2′-hydroxyethoxy)diphenylmethoxyphosphonium ion 5. The equilibrium constant Ka ([1][H+]/[5]) is 9 × 10−9, values determined by kinetic and spectroscopic methods being in good agreement. This phosphonium ion is, however, not involved in the overall hydrolysis reaction, which proceeds via the thermodynamically less stable cyclic five-membered phosphonium ion derived by loss of the exocyclic methoxy group from the phosphorane, the 2,2-diphenyl-1,3,2-dioxaphospholan-2-ylium ion 6. This route for the overall hydrolysis is established by analysis of the products, and by the observation that the rate constant for the disappearance of 5 in acid solutions is 40 000 times greater than that for an analog that differs only in not being able to cyclize, the (2′-methoxyethoxy)diphenylmethoxyphosphonium ion 7. At all pH, the phosphorane 1 and the ring-opened phosphonium ion 5 exist in equilibrium, and the rate-limiting step in the overall hydrolysis is the cleavage of the exocyclic methoxy group to give the cyclic phosphonium ion 6, which is rapidly converted to products by reaction with water. The actual equilibration reaction involving 1 and 5 cannot be observed at any pH, even with stopped-flow spectroscopy. The non-catalyzed ring closure of the phosphonium ion 5 reforming the phosphorane 1 occurs with a rate constant of 200–500 s−1, corresponding to an effective molarity of (2–5) × 107 M for the intramolecular hydroxy group in this reaction. The rate-limiting exocyclic cleavage is assisted by H+, with a very large rate constant 2 × 109 M−1 s−1. Catalysis by general acids is also observed. The Brønsted plot has a slope α of 1.0 for the weaker acids, with a break for acids with pKa < 3. This "Eigen"-type behavior is proposed to arise from a transition state with little phosphonium ion character, in which the proton is almost completely transferred for the weaker acids. Key words: phosphorane, phosphate, phosphonium, hydrolysis.

Product Release is Not the Rate-Limiting Step during Cytochalasin B-Induced ATPase Activity of Monomeric Actin

1991 ◽  
Vol 46 (1-2) ◽  
pp. 139-144 ◽  
Author(s):  
Peter Dancker ◽  
Lore Hess ◽  
Karl Ritter
Keyword(s):  
Steady State ◽  
Atpase Activity ◽  
Rate Constant ◽  
Cytochalasin B ◽  
Single Turnover ◽  
Rate Limiting Step ◽  
Hydrolysis Products ◽  
Limiting Step ◽  
Rate Limiting ◽  
Hydrolysis Of

Abstract Under conditions where cytochalasin B induces ATPase activity of monomeric actin (0.3 mᴍ MgCl2, 1 mᴍ EGTA , 30 (μᴍ cytochalasin B, 1 mᴍ ATP) the rate constant of the ex­change of actin-bound ε-ATP for free ATP is about 4 -6 times faster than steady state ATPase activity. When a stoichiometric ATP -actin complex is extracted with PCA (single turnover ex­periment) the apparent rate constant of Pi generation is not faster than steady state ATPase activity. -The experiments suggest that the hydrolysis of actin-bound ATP and not the subse­quent release of hydrolysis products is rate-limiting during cytochalasin-induced ATPase activi­ty of actin.

The hydrolysis and biogas production of complex cellulosic substrates using three anaerobic biomass sources

2013 ◽  
Vol 67 (2) ◽  
pp. 293-298 ◽  
Author(s):  
C. Keating ◽  
D. Cysneiros ◽  
T. Mahony ◽  
V. O'Flaherty
Keyword(s):  
Biogas Production ◽  
Positive Role ◽  
Diverse Range ◽  
Factors Affecting ◽  
Rate Limiting Step ◽  
Solid Substrates ◽  
Different Temperatures ◽  
Anaerobic Biomass ◽  
Rate Limiting ◽  
Hydrolysis Of

In this study, the ability of various sludges to digest a diverse range of cellulose and cellulose-derived substrates was assessed at different temperatures to elucidate the factors affecting hydrolysis. For this purpose, the biogas production was monitored and the specific biogas activity (SBA) of the sludges was employed to compare the performance of three anaerobic sludges on the degradation of a variety of complex cellulose sources, across a range of temperatures. The sludge with the highest performance on complex substrates was derived from a full-scale bioreactor treating sewage at 37 °C. Hydrolysis was the rate-limiting step during the degradation of complex substrates. No activity was recorded for the synthetic cellulose compound carboxymethylcellulose (CMC) using any of the sludges tested. Increased temperature led to an increase in hydrolysis rates and thus SBA values. The non-granular nature of the mesophilic sludge played a positive role in the hydrolysis of solid substrates, while the granular sludges proved more effective on the degradation of soluble compounds.

Potential of anaerobic digestion of complex waste(water)

2001 ◽  
Vol 44 (8) ◽  
pp. 115-122 ◽  
Author(s):  
G. Zeeman ◽  
W. Sanders
Keyword(s):  
Waste Water ◽  
Anaerobic Digestion ◽  
Order Relation ◽  
Organic Substrates ◽  
Reactor Technology ◽  
Rate Limiting Step ◽  
Treatment Technologies ◽  
Transport Complex ◽  
Rate Limiting ◽  
Hydrolysis Of

Although they differ greatly in origin complex waste(water)s mainly consist of proteins, lipids, carbohydrates and sometimes lignin in addition. Hydrolysis is the first and generally rate-limiting step in the process of anaerobic digestion of particulate organic substrates. Hydrolysis of particulate polymers can be described by Surface Based Kinetics, but for use in practice the empirical first order relation is advised. Unlike the hydrolysis of protein and carbohydrate, lipid hydrolysis is hardly occurring in the absence of methanogenesis. The latter is probably a physical rather than a biological process and affects the choice for either a one- or a two-step (phase) anaerobic reactor. In the chain of collection and transport, complex wastes often become complex wastewaters simply because of dilution. Dilution not only changes the reactor technology to be applied but also complicates the post-treatment and possibilities for resource recovery. Combining concentrated with diluted waste streams will almost always end up in much more complicated treatment technologies.

Biological treatability of a corn wet mill effluent

2002 ◽  
Vol 45 (12) ◽  
pp. 339-346 ◽  
Author(s):  
G. Eremektar ◽  
O. Karahan-Gul ◽  
F. Germirli-Babuna ◽  
S. Ovez ◽  
H. Uner ◽  
...  
Keyword(s):  
Biological Treatment ◽  
Rate Coefficient ◽  
Activated Sludge Process ◽  
Rate Limiting Step ◽  
Limiting Step ◽  
Metabolic Products ◽  
High Level ◽  
Biological Treatability ◽  
Rate Limiting ◽  
Hydrolysis Of

Corn wet mill effluents are studied in terms of their characteristics relevant for biological treatment. They have a high COD of mainly soluble and biodegradable nature, with practically no soluble inert components. They generate a relatively high level of soluble residual metabolic products, which affects the choice of the appropriate biological treatment and favors aerobic activated sludge process. Experimental assessment of process kinetics yields typical values. Hydrolysis of the slowly biodegradable COD, the rate limiting step for the utilization of substrate, is characterized by an overall rate coefficient, which is within the range commonly associated for the hydrolysis of starch.

Effect of Medium on Acid-Catalyzed Decomposition of N-(Phenylazo)-Substituted Nitrogen Heterocycles

1999 ◽  
Vol 64 (10) ◽  
pp. 1654-1672 ◽  
Author(s):  
Miroslav Ludwig ◽  
Iva Bednářová ◽  
Patrik Pařík
Keyword(s):  
Rate Constant ◽  
Principal Component ◽  
Catalyst Particle ◽  
Pivalic Acid ◽  
Linear Regression Method ◽  
Catalytic Rate Constant ◽  
Rate Limiting Step ◽  
Acid Catalyzed ◽  
Rate Limiting ◽  
Kinetics Of

Four N-(phenylazo)-substituted saturated nitrogen heterocyclics were synthesized and their structure was confirmed by 1H and 13C NMR spectroscopy. The kinetics of their acid-catalyzed decomposition were studied at various concentrations of the catalyst (pivalic acid) in 40, 30, and 20% (v/v) aqueous ethanol at 25 °C. The values obtained for the observed rate constants were processed by the non-linear regression method according to the suggested kinetic models and by the method of principal component analysis (PCA). The interpretation of the results has shown that the acid-catalyzed decomposition of the heterocyclics under the conditions used proceeds by the mechanism of general acid catalysis, the proton being the dominant catalyst particle of the rate-limiting step. The decrease in the observed rate constant at higher concentrations of the catalyst was explained by the formation of a non-reactive complex composed of the undissociated acid and the respective N-(phenylazo)heterocycle. The effect of medium and steric effect of the heterocyclic moiety on the values of catalytic rate constant are discussed.

scholarly journals Coassembly of SecYEG and SecA Fully Restores the Properties of the Native Translocon

2018 ◽  
Vol 201 (1) ◽  
Author(s):  
Priya Bariya ◽  
Linda L. Randall
Keyword(s):  
Lipid Bilayers ◽  
Rate Constant ◽  
Apparent Rate Constant ◽  
Membrane Vesicles ◽  
Rate Limiting Step ◽  
Limiting Step ◽  
Secretory System ◽  
Rate Limiting

ABSTRACTIn all cells, a highly conserved channel transports proteins across membranes. InEscherichia coli, that channel is SecYEG. Many investigations of this protein complex have used purified SecYEG reconstituted into proteoliposomes. How faithfully do activities of reconstituted systems reflect the properties of SecYEG in the native membrane environment? We investigated by comparing threein vitrosystems: the native membrane environment of inner membrane vesicles and two methods of reconstitution. One method was the widely used reconstitution of SecYEG alone into lipid bilayers. The other was our method of coassembly of SecYEG with SecA, the ATPase of the translocase. For nine different precursor species we assessed parameters that characterize translocation: maximal amplitude of competent precursor translocated, coupling of energy to transfer, and apparent rate constant. In addition, we investigated translocation in the presence and absence of chaperone SecB. For all nine precursors, SecYEG coassembled with SecA was as active as SecYEG in native membrane for each of the parameters studied. Effects of SecB on transport of precursors faithfully mimicked observations madein vivo. From investigation of the nine different precursors, we conclude that the apparent rate constant, which reflects the step that limits the rate of translocation, is dependent on interactions with the translocon of portions of the precursors other than the leader. In addition, in some cases the rate-limiting step is altered by the presence of SecB. Candidates for the rate-limiting step that are consistent with our data are discussed.IMPORTANCEThis work presents a comprehensive quantification of the parameters of transport by the Sec general secretory system in the threein vitrosystems. The standard reconstitution used by most investigators can be enhanced to yield six times as many active translocons simply by adding SecA to SecYEG during reconstitution. This robust system faithfully reflects the properties of translocation in native membrane vesicles. We have expanded the number of precursors studied to nine. This has allowed us to conclude that the rate constant for translocation varies with precursor species.

Growth and cellulolytic activity of Cellulomonas flavigena

1981 ◽  
Vol 27 (12) ◽  
pp. 1260-1266 ◽  
Author(s):  
B. H. Kim ◽  
J. W. T. Wimpenny
Keyword(s):  
Free Enzyme ◽  
Crystalline Cellulose ◽  
Exponential Growth Phase ◽  
Cellulolytic Bacterium ◽  
Cellulolytic Activity ◽  
Mineral Salts ◽  
Cellulomonas Flavigena ◽  
Rate Limiting Step ◽  
Rate Limiting ◽  
Hydrolysis Of

Growth factor requirements, growth kinetics, and the ability to produce the enzyme cellulase were examined in the cellulolytic bacterium Cellulomonas flavigena KIST 321. The organism was found to require only thiamine for growth in mineral salts medium containing simple sugars or cellulose. Growth rates on various carbohydrates suggested that disruption of the crystalline structure was the rate-limiting step in the utilization of crystalline cellulose, and hydrolysis of the polymer itself was as rapid as the uptake of the hydrolytic product. When the organism was grown on cellulose the cellulolytic activity appeared to be bound to the cell at the beginning of the exponential growth phase: only after this did cell-free enzyme activity appear. The cell-free enzyme appeared to be unstable, and its activity decreased at the beginning of the stationary phase.

scholarly journals The kinetics of hydrolysis of some extended N-aminoacyl-l-arginine methyl esters by human plasma kallikrein. Evidence for subsites S2 and S3

1982 ◽  
Vol 203 (1) ◽  
pp. 149-153 ◽  
Author(s):  
P R Levison ◽  
G Tomalin
Keyword(s):  
Human Plasma ◽  
Methyl Esters ◽  
Plasma Kallikrein ◽  
Substrate Complex ◽  
Enzyme Substrate ◽  
Rate Limiting Step ◽  
Kinetics Of Hydrolysis ◽  
Rate Limiting ◽  
Kinetics Of ◽  
Hydrolysis Of

Subsites in the S2-S4 region were identified in human plasma kallikrein. Kinetic constants (kcat., Km) were determined for a series of seven extended N-aminoacyl-L-arginine methyl esters based on the C-terminal sequence of bradykinin (-Pro-Phe-Arg) or (Gly)n-Arg. The rate-limiting step for the enzyme-catalysed reaction was found to be deacylation of the enzyme. It was possible to infer that hydrogen-bonded interactions occur between substrate and the S2-S4 region of kallikrein. Insertion of L-phenylalanine at residue P2 demonstrates that there is also a hydrophobic interaction with subsite S2, which stabilizes the enzyme-substrate complex. The strong interaction demonstrated between L-proline at residue P3 and subsite S3 is of greatest importance in the selectivity of human plasma kallikrein. The purification of kallikrein from Cohn fraction IV of human plasma is described making use of endogenous Factor XIIf to activate the prekallikrein. Kallikreins I (Mr 91 000) and II (Mr 85 000) were purified 170- and 110-fold respectively. Kallikrein I was used for the kinetic work.

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