Structure of the L1 and L6 core oligosaccharide epitopes of Neisseriameningitidis

1990 ◽  
Vol 68 (7) ◽  
pp. 1029-1034 ◽  
Author(s):  
Jose L. Di Fabio ◽  
Francis Michon ◽  
Jean-Robert Brisson ◽  
Harold J. Jennings

The core oligosaccharides obtained from the lipopolysaccharides of Neisseriameningitidis serotypes 1 and 6 were isolated by mild acid hydrolysis, and their structures elucidated by combined chemical, biochemical, and physical techniques. Use was made of 500 MHz 1H nuclear magnetic resonance measurements in both one-dimensional and two-dimensional modes as well as of nuclear Overhauser enhancement experiments. To assist in the structural assignments, the purified oligosaccharides were also degraded by chemical and enzymatic procedures to smaller fragments. The L1 oligosaccharide is a biantennary partially O-acetylated heptasaccharide in which the larger antenna terminates in a α-D-Galp1 → 4β-D-Galp1 → 4β-D-Glcp unit, whereas the smallest disaccharide antenna carries phosphorylethanolamine groups at O-3 of its heptosyl moiety. The L6 oligosaccharide is also a biantennary partially O-acetylated heptasaccharide but, unlike the L1 core, is terminated by a β-D-GlcpNAcl → 3β-D-Galp1 → 4β-D-Glcp unit in its larger antenna. The heptosyl moiety in the small disaccharide antenna bears a phosphorylethanolamine group at O-7, unlike O-3 for the L1 determinant. Keywords: lipopolysaccharides, Neisseriameningitidis, oligosaccharide epitopes, structure, NMR spectroscopy.

2020 ◽  
Vol 48 (W1) ◽  
pp. W41-W47 ◽  
Author(s):  
Fabrice Allain ◽  
Fabien Mareuil ◽  
Hervé Ménager ◽  
Michael Nilges ◽  
Benjamin Bardiaux

Abstract Nuclear magnetic resonance (NMR) spectroscopy is a method of choice to study the dynamics and determine the atomic structure of macromolecules in solution. The standalone program ARIA (Ambiguous Restraints for Iterative Assignment) for automated assignment of nuclear Overhauser enhancement (NOE) data and structure calculation is well established in the NMR community. To ultimately provide a perfectly transparent and easy to use service, we designed an online user interface to ARIA with additional functionalities. Data conversion, structure calculation setup and execution, followed by interactive visualization of the generated 3D structures are all integrated in ARIAweb and freely accessible at https://ariaweb.pasteur.fr.


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