Effect of salt on the tyrosine and protonated Schiff base deprotonation kinetics in bacteriorhodopsin

1985 ◽  
Vol 63 (7) ◽  
pp. 1699-1704 ◽  
Author(s):  
Paul Dupuis ◽  
M. A. El-Sayed

It is observed that the number of protons pumped per M412 formed in the bacteriorhodopsin photocycle almost doubles at high salt concentrations. In this paper, we studied the rates of deprotonation of tyrosine and of the two components of the protonated Schiff base at high salt concentrations, and at different pHs and temperatures. It is found that at pH = 7, increasing the salt concentration decreases the rates of deprotonation of the protonated Schiff base and tyrosine. This strongly suggests that the observed gain in the quantum yield of proton release per M412 formed when the salt concentration is increased is not a result of an increase in these rates. However, at high pH, e.g. 9.6, increasing the salt concentration increases the rate of deprotonation of the Schiff base by about 50%. Under all conditions, the slow component of the Schiff base is found to lose its proton prior to tyrosine.

2019 ◽  
Vol 21 (1) ◽  
pp. 160
Author(s):  
Alfons Penzkofer ◽  
Arita Silapetere ◽  
Peter Hegemann

The retinal photocycle dynamics of the fluorescent voltage sensor QuasAr1 (Archaerhodopsin 3 P60S-T80S-D95H-D106H-F161V mutant from Halorubrum sodomense) in pH 8 Tris buffer was studied. The samples were photoexcited to the first absorption band of the protonated retinal Schiff base (PRSB) Ret_580 (absorption maximum at λmax ≈ 580 nm), and the retinal Schiff base photoisomerization and protonation state changes were followed by absorption spectra recordings during light exposure and after light exposure. Ret_580 turned out to be composed of two protonated retinal Schiff base isomers, namely Ret_580I and Ret_580II. Photoexcitation of Ret_580I resulted in barrier-involved isomerization to Ret_540 (quantum yield ≈ 0.056) and subsequent retinal proton release leading to Ret_410 deprotonated retinal Schiff base (RSB). In the dark, Ret_410 partially recovered to Ret_580I and partially stabilized to irreversible Ret_400 due to apoprotein restructuring (Ret_410 lifetime ≈ 2 h). Photoexcitation of Ret_580II resulted in barrier-involved isomerization to Ret_640 (quantum yield ≈ 0.00135) and subsequent deprotonation to Ret_370 (RSB). In the dark, Ret_370 partially recovered to Ret_580II and partially stabilized to irreversible Ret_350 due to apoprotein restructuring (Ret_370 lifetime ≈ 10 h). Photocycle schemes and reaction coordinate diagrams for Ret_580I and Ret_580II were developed and photocyle parameters were determined.


1995 ◽  
Vol 68 (4) ◽  
pp. 1518-1530 ◽  
Author(s):  
Y. Cao ◽  
L.S. Brown ◽  
J. Sasaki ◽  
A. Maeda ◽  
R. Needleman ◽  
...  

2006 ◽  
Vol 34 (1) ◽  
pp. 199-204 ◽  
Author(s):  
J. Hu ◽  
X.J. Xie ◽  
Z.F. Wang ◽  
W.J. Song

1986 ◽  
Vol 49 (6) ◽  
pp. 423-427 ◽  
Author(s):  
K.-D. HENRY CHIN ◽  
P. E. KOEHLER

Two factors, salt concentration and incubation temperature, were examined for their effect on the formation of histamine, phenethylamine, tryptamine and tyramine during miso (soybean paste) fermentation. Misos containing 5 and 10% NaCl were prepared and incubated at 25 and 35°C. The effect of each factor was determined from the chemical and microbiological changes in the misos during fermentation. Salt level was a significant factor in the formation of amines. Higher amine levels were found in low-salt (5% NaCl) formulations than in high-salt (10% NaCl) misos. Incubation temperature within the range of 25 to 35°C during fermentation had little effect on amine formation in misos.


2014 ◽  
Vol 2014 (13) ◽  
pp. 5362-5373
Author(s):  
Joseph Lala ◽  
Renato Lebumfacil ◽  
Ed Mira ◽  
Shannon R. Grant ◽  
Scott J. Christian ◽  
...  

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