Energetics of ligand and inhibitor interactions with acetylcholinesterase

1987 ◽  
Vol 65 (9) ◽  
pp. 798-802 ◽  
Author(s):  
Y. T. Das ◽  
H. D. Brown ◽  
S. K. Chattopadhyay

Acetylcholinesterase (AChE, EC 3.1.1.7) from Electrophorus electricus, purified by affinity chromatography to a specific activity of 7000 – 10000 U/mg protein, was studied at 27 °C in conduction-type microcalorimeters for the heats of reaction, with the subsite-specific cationic ligands edrophonium and propidium and with the irreversible inhibitor diisopropylfluorophosphate (DFP), in an ion-free aqueous medium. Edrophonium and propidium, each at 0.5 × 10−5 M, yielded reaction heats of +3.2 and –1.5 kcal/mol (1 kcal = 4.184 J) respectively, with 1.3 × 10−5 M AChE active sites. DFP (1.3 × 10−5 M) reacted exothermically yielding −0.5 kcal/mol at stoichiometric level with AchE active sites. Circular dichroic spectra showed that a ternary complex of AChE (6.5 × 10−7 M active sites) and the two ligands (each at 1 × 10−3 M) in 1 mM Tris–HCl buffer (pH 8.0) had a positive Cotton effect at 235 nm. Neither DFP nor phosphoric acid 2,2-dichloroethenyl dimethyl ester (DDVP) caused any appreciable change. DFP–AChE, however, behaved like a normal enzyme in showing a positive Cotton effect in association with the two ligands. DDVP–AChE showed an increase in negative ellipticity at 287 nm in the presence of the two ligands. Another cationic ligand, d-tubocurarine, when present together with edrophonium, increased negative ellipticity at 302 nm and blue-shifted a 265-nm peak of the normal AChE. DFP interactions with AChE appear to be energetically different from those of edrophonium, the latter of which is believed to associate with the acetylcholine-binding subsite.

2014 ◽  
Vol 2014 ◽  
pp. 1-9
Author(s):  
Boon Hooi Tan ◽  
Thean Chor Leow ◽  
Hooi Ling Foo ◽  
Raha Abdul Rahim

A superoxide dismutase (SOD) gene ofLactococcus lactisM4 was cloned and expressed in a prokaryotic system. Sequence analysis revealed an open reading frame of 621 bp which codes for 206 amino acid residues. Expression ofsodAunder T7 promoter exhibited a specific activity of 4967 U/mg when induced with 1 mM of isopropyl-β-D-thiogalactopyranoside. The recombinant SOD was purified to homogeneity by immobilised metal affinity chromatography and Superose 12 gel filtration chromatography. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis and western blot analyses of the recombinant SOD detected a molecular mass of approximately 27 kDa. However, the SOD was in dimer form as revealed by gel filtration chromatography. The purified recombinant enzyme had a pI of 4.5 and exhibited maximal activity at 25°C and pH 7.2. It was stable up to 45°C. The insensitivity of this lactococcal SOD to cyanide and hydrogen peroxide established that it was a MnSOD. Although it has 98% homology to SOD ofL. lactisIL1403, this is the first elucidated structure of lactococcal SOD revealing active sites containing the catalytic manganese coordinated by four ligands (H-27, H-82, D-168, and H-172).


1989 ◽  
Vol 257 (4) ◽  
pp. G616-G623 ◽  
Author(s):  
H. A. Buller ◽  
A. G. Van Wassenaer ◽  
S. Raghavan ◽  
R. K. Montgomery ◽  
M. A. Sybicki ◽  
...  

Lactase-phlorizin hydrolase, a small intestinal disaccharidase, has been considered mainly an enzyme important only for the hydrolysis of lactose. After weaning in most mammals lactase-specific activity falls markedly, and, functionally, adult mammals are considered to be lactase deficient. However, the persistence of low levels of lactase activity in adulthood has never been explained. In addition, it has been suggested that lactase-phlorizin hydrolase is associated with glycosylceramidase activity when the enzyme is prepared by column chromatography, but it is unclear whether this represents copurified activities or two catalytic sites on one peptide. The developmental patterns of lactase-phlorizin hydrolase and other disaccharidases were investigated in homogenates of total rat small intestine; lactase and several glycosylceramidases were measured in immunoprecipitates from these homogenates using a monoclonal antibody. The developmental pattern of total lactase activity showed a steady 2.3-fold increase to adult levels (specific activity decreased eightfold), whereas total phlorizin-hydrolase activity increased 10.7-fold (specific activity decreased threefold). As expected, levels of both total and specific sucrase and maltase activities increased during development. In lactating rats total lactase activity showed a significant increase compared with adult males. The developmental pattern of the enzyme activities for the glycolipid substrates was similar to that found for lactase, and the immunoprecipitated enzyme showed a 40- to 55-fold higher affinity for the glycolipids than for lactose. Galactosyl- and lactosylceramide inhibited lactose hydrolysis by 38%, without a competitive pattern, suggesting two different active sites for lactose and glycolipid hydrolysis, respectively.(ABSTRACT TRUNCATED AT 250 WORDS)


2020 ◽  
Vol 8 (11) ◽  
pp. 1796
Author(s):  
Folasade K. Olagoke ◽  
Klaus Kaiser ◽  
Robert Mikutta ◽  
Karsten Kalbitz ◽  
Cordula Vogel

Adsorption of extracellular enzymes to soil minerals is assumed to protect them against degradation, while modifying their activities at the same time. However, the persistence of the activity of adsorbed enzymes remains poorly understood. Therefore, we studied the persistence of cellulase and α-amylase activities after adsorption to soil amended with various amounts (+1, +5, and +10 wt.%) of three typical soil minerals, montmorillonite, kaolinite, and goethite. Soil without mineral addition (pure soil), pure minerals, and pure dissolved enzymes were used as references. Soil mineral–enzyme complexes were prepared and then incubated for 100 days; temporal changes in enzyme activities were analyzed after 0, 0.1, 1, 10, and 100 days. The specific enzyme activities (activities normalized to protein content) and their persistence (activities relative to activities at day 0) were compared to enzyme activities in solution and after sorption to the control soil. Amylase adsorption to pure minerals increased in the following order: montmorillonite > kaolinite > goethite. That of cellulase increased in the following order: goethite > montmorillonite > kaolinite. Adsorption of enzymes to soils did not increase in the same order of magnitude as the addition of reactive binding sites. Based on inverse relationships between the amount of enzyme adsorbed and the specific enzyme activity and their persistency, we showed that a limited availability of sorption sites is important for high specific activity and persistence of the enzymes. This is probably the consequence of less and weaker bonds, as compared to a high availability of sorption sites, resulting in a smaller impact on the active sites of the enzyme. Hence, we suppose that the soil mineral phase supports microorganisms in less-sorptive environments by saving energy on enzyme production, since small enzyme release could already result in sufficient activities to degrade respective target carbon substrates.


1977 ◽  
Vol 55 (8) ◽  
pp. 804-811 ◽  
Author(s):  
Dominique Job ◽  
H. Brian Dunford

Circular dichroic (CD) spectra of two turnip isoperoxidases, P1 and P7, and of their derivatives were measured over the wavelength range of 200 to 650 nm. For the two isoenzymes, it was observed that although the visible and Soret bands are located at similar wavelengths, their ellipticities are different. These results suggest that the active sites are similar but that differences do exist. The results are compared with those reported for Japanese radish peroxidase a and horseradish peroxidase. It appears that a common property of plant peroxidases is the presence of negative CD Soret bands for the reduced forms and their inversion upon cyanide binding. The CD spectra in the far UV region indicate an appreciable helical content for both native enzymes and their various derivatives. The calculated contents of unordered structure are very high (greater than 50% for either P1 or P7), in agreement with other studies on glycoproteins.


2007 ◽  
Vol 388 (12) ◽  
pp. 1291-1300 ◽  
Author(s):  
Ai-Sheng Xiong ◽  
Ri-He Peng ◽  
Jing Zhuang ◽  
Jin-Ge Liu ◽  
Feng Gao ◽  
...  

Abstract Directed evolution in vitro is a powerful molecular tool for the creation of new biological phenotypes. It is unclear whether it is more efficient to mutate an enzyme randomly or to mutate just the active sites or key sites. In this study, the strategy of a semi-rational design of directed evolution combined with whole sequence and sites was developed. The 1553 bp gene encoding the thermostable β-galactosidase of Pyrococcus woesei was chemically synthesized and optimized for G+C content and mRNA secondary structures. The synthesized gene product was used as a template or as a wild-type control. On the basis of the first round of DNA shuffling, library construction and screening, one mutant of YH6754 was isolated with higher activity. Eight potential key sites were deduced from the sequence of the shuffled gene, and 16 degenerate oligonucleotides were designed according to those eight amino acids. Two variants of YG6765 and YG8252 were screened in the second part of DNA shuffling, library construction and screening. For comparison, one mutant of YH8757 was screened through the same routine rounds of directed evolution with YH6754 as template. The purified β-galactosidase from YH8757 exhibited a lower specific activity at 25°C than those purified from mutated YG6755 and YG8252.


1998 ◽  
Vol 16 (1) ◽  
pp. 21-32 ◽  
Author(s):  
G.A. El-Shobaky ◽  
A.M. Ghozza ◽  
N.M. Deraz

Ferric–nickel/aluminium mixed oxide solids have the formula Fe2O3–0.42NiO/Al2O3 were treated with Li2O (0.75–3 mol%) and heated in air for 4 h at 500°C and 800°C, respectively. The effects of this treatment on the surface characteristics of these solids and their catalytic properties in relation to CO oxidation by O2 have been investigated. The results reveal that Li2O doping at 0.75 mol% concentration resulted in an increase of 24% and 18%, respectively, in the value of the specific surface areas, SBET, of the solids precalcined at 500°C and 800°C, while the addition of 3 mol% Li2O led to a slight decrease of ca. 10% in the SBET value of the same solids. In contrast, irrespective of whether the doping process involved solids precalcined at 500°C or 800°C, a significant decrease of 37% and 78%, respectively, was observed in the catalytic activity of these materials. This decrease in catalytic activity was not accompanied by any appreciable change in the magnitude of the activation energy for the catalytic reaction, i.e. Li2O doping brings about a decrease in the concentration of catalytically active sites without changing their energetic nature.


1998 ◽  
Vol 53 (5-6) ◽  
pp. 416-420 ◽  
Author(s):  
S. Giovanni-De-Simone ◽  
A. Hassón-Voloch ◽  
C. Batista-e-Silva ◽  
A. Nery-da-Matta

Abstract The glyceraldehyde-phosphate dehydrogenase (GAPDH, EC 1.2.1.12) was purified to homogeneity from electric organ of Electrophorus electricus (L.) by a hydrophobic chroma­ tography method on deacetylcolchicine-Sepharose. The purification resulted in a 162 fold increase in specific activity of the GAPDH and final yield was approximately 37%. The purified enzyme showed a single band in SDS-PAGE, with an apparent molecular mass of 36 kDa. The purity of the colchicine-Sepharose isolated material was analysed by isoelectro-phocusing and immunoblotting using a heterologous rabbit serum anti-GAPDH. Sequence analysis of the 40-N-terminal amino acids, determined by Edman degradation, revealed its identity to other GAPDHs proteins being the largest number of identical amino acids to lobster (92.5%), rabbit muscle (85%) and human liver (80%) GAPDH.


2006 ◽  
Vol 34 (2) ◽  
pp. 223-227 ◽  
Author(s):  
R.W. Brownsey ◽  
A.N. Boone ◽  
J.E. Elliott ◽  
J.E. Kulpa ◽  
W.M. Lee

Acetyl-CoA carboxylase (ACC) catalyses the formation of malonyl-CoA, an essential substrate for fatty acid synthesis in lipogenic tissues and a key regulatory molecule in muscle, brain and other tissues. ACC contributes importantly to the overall control of energy metabolism and has provided an important model to explore mechanisms of enzyme control and hormone action. Mammalian ACCs are multifunctional dimeric proteins (530–560 kDa) with the potential to further polymerize and engage in multiprotein complexes. The enzymatic properties of ACC are complex, especially considering the two active sites, essential catalytic biotin, the three-substrate reaction and effects of allosteric ligands. The expression of the two major isoforms and splice variants of mammalian ACC is tissue-specific and responsive to hormones and nutritional status. Key regulatory elements and cognate transcription factors are still being defined. ACC specific activity is also rapidly modulated, being increased in response to insulin and decreased following exposure of cells to catabolic hormones or environmental stress. The acute control of ACC activity is the product of integrated changes in substrate supply, allosteric ligands, the phosphorylation of multiple serine residues and interactions with other proteins. This review traces the path and implications of studies initiated with Dick Denton in Bristol in the late 1970s, through to current proteomic and other approaches that have been consistently challenging and immensely rewarding.


2000 ◽  
Vol 381 (3) ◽  
pp. 211-219 ◽  
Author(s):  
Peter Steinert ◽  
Karin Plank-Schumacher ◽  
Marisa Montemartini ◽  
Hans-Jürgen Hecht ◽  
Leopold Flohé

Abstract Tryparedoxins (TXN) are thioredoxinrelated proteins which, as trypanothione:peroxiredoxin oxidoreductases, constitute the trypanothionedependent antioxidant defense and may also serve as substrates for ribonucleotide reductase in trypanosomatids. The active site motif of TXN2, [40]WCPPCR[45], of Crithidia fasciculata was mutated by sitedirected mutagenesis and eight corresponding muteins were expressed in E. coli as terminally Histagged proteins, purified to homogeneity by nickel chelate chromatography, and characterized in terms of specific activity, specificity and, if possible, kinetics. Exchange of Cys41 and Cys44 by serine yielded inactive products confirming their presumed involvement in catalysis. Exchange of Arg45 by aspartate resulted in loss of activity, suggesting an activation of active site cysteines by the positive charge of Arg45. Substitution of Trp40 by phenylalanine or tyrosine resulted in moderate decrease of specific activity, as did exchange of Pro42 by glycine. Kinetic analysis of these three muteins revealed that primarily the reaction with trypanothione is affected by the mutations. Simulation of thioredoxin or glutaredoxin like active sites in TXN2 (P42G and W40T/P43Y, respectively) did not result in thioredoxin or glutaredoxin like activities. These data underscore that TXNs, although belonging to the thioredoxin superfamily, represent a group of enzymes distinct from thioredoxins and glutaredoxins in terms of specificity, and appear attractive as molecular targets for the design of trypanocidal compounds.


1974 ◽  
Vol 1 (1) ◽  
pp. 15 ◽  
Author(s):  
H Greenway ◽  
AP Sims

The effects of KC1 on catalytic and allosteric properties of malate dehydrogenase (decarboxylating) were studied. Chloride salts (50 mM and higher) strongly inhibited enzyme activity at low malate concentrations. At high malate (4 mM) , on the other hand, the degree of inhibition induced by chloride was very small. The s0.5 value (i.e. the malate concentration required for half maximum velocity) was about 0.4 mM in the absence of KC1 and increased to 0.75 and 1.5 mM at 50 and 100 mM KC1 respectively. High chloride concentrations also removed a small degree of substrate inhibition, which in the absence of KC1 occurred at 8 mM malate. At low malate concentrations (< 0 . 5 mM) 50 mM KC1 increased the Hill number from 1.3 to 1.9. Thus chloride treatment revealed a strong degree of cooperativity for the enzyme. This potential for homotropic effects was much less realized in MES buffer (potassium salt), presumably because affinity of malate for individual active sites was already very high. These effects of KC1 were readily reversible and the enzyme showed no appreciable change in molecular weight in the presence of 200 mM KCl. At malate concentrations between 1 and 12 mM, inhibitions of malate dehydrogenase (decarboxylating) activity induced by oxaloacetate, D-malate, and phosphoglycerate were reduced by KCl. At low malate concentrations, on the other hand, the inhibitory effect induced by oxaloacetate changed to a strong stimulatory effect in the presence of KCl. The inhibitory effect due to oxaloacetate was greatly diminished in malate dehydrogenase (decarboxylating) which was eluted from a DE52 cellulose column, but the inhibitory effect due to KC1 was retained. Elution from DE52 cellulose also reduced the Hill number to 1 and increased the s0.5 value. The above results suggest that KC1 reduced the affinity of both substrate and some allosteric inhibitors of malate dehydrogenase (decarboxylating).


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