Phosphoenolpyruvate Carboxylase of Thiobacillus thiooxidans. Kinetic and Metabolic Control Properties

1972 ◽  
Vol 50 (2) ◽  
pp. 158-165 ◽  
Author(s):  
R. L. Howden ◽  
H. Lees ◽  
Isamu Suzuki
Keyword(s):  
Enzyme Activity ◽  
Competitive Inhibitor ◽  
Acetyl Coa ◽  
Ph Optimum ◽  
Pep Carboxylase ◽  
Thiobacillus Thiooxidans ◽  
Powerful Activator ◽  
Michaelis Constants ◽  
Noncompetitive Inhibitor ◽  
Decreasing Ph

Phosphoenolpyruvate (PEP) carboxylase (orthophosphate:oxalacetate carboxy-lyase (phosphorylating), EC 4.1.1.31) was purified 19-fold from Thiobacillus thiooxidans. The level of enzyme activity was dependent on culture age. No enzyme activity could be obtained from frozen cells.The pH optimum of the enzyme was determined to be around 8.0. Apparent Michaelis constants were determined for the substrates:phosphoenolpyruvate (1.4, 1.5 mM), bicarbonate (0.4, 1.1 mM), and magnesium (1.1, 0.8 mM) at pH 7.0 and 8.0, respectively. Acetyl-CoA was found to be a powerful activator of this enzyme, with the degree of activation increasing with decreasing pH. The concentration of acetyl-CoA to obtain half-maximal activation, however, remained fairly constant and low, namely 1.2 and 1.0 μM at pH 7.0 and 8.0, respectively. L-Aspartate and L-malate were strong inhibitors of enzyme activity. In the presence of aspartate at pH 7.0 the double reciprocal activity plots for PEP became nonlinear, a characteristic of negative cooperativity. These plots became linear with the addition of acetyl-CoA with aspartate now acting as a noncompetitive inhibitor with respect to PEP. At pH 8.0, the same plots were linear with aspartate acting as a competitive inhibitor of PEP. All the other effectors of PEP carboxylase from Salmonella typhimurium and Escherichia coli were found to be ineffective towards the enzyme from T. thiooxidans.

scholarly journals The kinetic properties of citrate synthase from rat liver mitochondria

1969 ◽  
Vol 114 (3) ◽  
pp. 597-610 ◽  
Author(s):  
D. Shepherd ◽  
P. B. Garland
Keyword(s):  
Rat Liver ◽  
Citrate Synthase ◽  
Adenine Nucleotide ◽  
Sedimentation Coefficient ◽  
Liver Mitochondria ◽  
Rat Liver Mitochondria ◽  
Kinetic Properties ◽  
Acetyl Coa ◽  
Ph Optimum ◽  
Michaelis Constants

1. Citrate synthase (EC 4.1.3.7) was purified 750-fold from rat liver. 2. Measurements of the Michaelis constants for the substrates of citrate synthase gave values of 16μm for acetyl-CoA and 2μm for oxaloacetate. Each value is independent of the concentration of the other substrate. 3. The inhibition of citrate synthase by ATP, ADP and AMP is competitive with respect to acetyl-CoA. With respect to oxaloacetate the inhibition by AMP is competitive, but the inhibition by ADP and ATP is mixed, being partially competitive. 4. At low concentrations of both substrates the inhibition by ATP is sigmoidal and a Hill plot exhibits a slope of 2·5. 5. The pH optimum of the enzyme is 8·7, and is not significantly affected by ATP. 6. Mg2+ inhibits citrate synthase slightly, but relieves the inhibition caused by ATP in a complex manner. 7. At constant total adenine nucleotide concentration made up of various proportions of ATP, ADP and AMP, the activity of citrate synthase is governed by the concentration of the sum of the energy-rich phosphate bonds of ADP and ATP. 8. The sedimentation coefficient of the enzyme, as measured by activity sedimentation, is 6·3s, equivalent to molecular weight 95000.

scholarly journals Factors which affect the activity of purified rat liver acyl-CoA oxidase

1993 ◽  
Vol 290 (1) ◽  
pp. 97-102 ◽  
Author(s):  
R Hovik ◽  
H Osmundsen
Keyword(s):  
Enzyme Activity ◽  
Rat Liver ◽  
Oxidase Activity ◽  
Substrate Inhibition ◽  
Critical Micellar Concentration ◽  
Competitive Inhibitor ◽  
Acetyl Coa ◽  
Acyl Coa Oxidase ◽  
Triton X

The activity of the enzyme acyl-CoA oxidase (EC 1.3.99.3) is influenced by detergents. At concentrations above the critical micellar concentration, Triton X-100, Triton X-114 and Thesit stimulate oxidase activity. Lower concentrations of Triton X-100 and Triton X-114 render the acyl-CoA oxidase less sensitive towards substrate inhibition by palmitoyl-CoA or dec-4-cis-enoyl-CoA. Other detergents inhibited the enzyme activity. CoA was found to be a relatively powerful competitive inhibitor of the enzyme, with a Ki, slope value of 63 +/- 3 microM. This inhibition is dependent on an intact CoA molecule, as dephospho-CoA, dethio-CoA and acetyl-CoA are less potent inhibitors of the enzyme. Dec-2-trans-enoyl-CoA is a product-inhibitor of acyl-CoA oxidase, with a Ki, slope value of 7 +/- 1 microM.

Phosphoenolpyruvate Carboxylase of Thiobacillus thioparus. I. General Properties

1975 ◽  
Vol 53 (8) ◽  
pp. 875-880 ◽  
Author(s):  
Daryl J. Hoban ◽  
Ronald M. Lyric
Keyword(s):  
Enzyme Activity ◽  
Phosphoenolpyruvate Carboxylase ◽  
Acetyl Coa ◽  
Pep Carboxylase ◽  
Thiobacillus Thioparus ◽  
General Properties

Phosphoenolpyruvate (PEP) carboxylase (orthophosphate:oxalacetate carboxylase (phosphorylating), EC 4.1.1.31) was purified 19-fold from the obligate chemoautotroph, Thiobacillus thioparus.Michaelis constants for the substrates were found to be 0.44 mM for phosphoenolpyruvate, 0.89 mM for bicarbonate, and 0.37 mM for magnesium, using Tris–HCl, pH 7.3.1-Aspartate, 1-malate, and orthophosphate were found to be inhibitors of enzyme activity, while acetyl CoA, FDP, GTP, and CDP had no effect. Dioxane greatly stimulated enzyme activity.

Pea alcohol dehydrogenase: Substrate specificity and binding of coenzyme to enzyme

1979 ◽  
Vol 44 (2) ◽  
pp. 631-636 ◽  
Author(s):  
Marie Stiborová ◽  
Roman Lapka ◽  
Noemi Nováková ◽  
Sylva Leblová
Keyword(s):  
Alcohol Dehydrogenase ◽  
Substrate Specificity ◽  
Competitive Inhibitor ◽  
Substrate Oxidation ◽  
Enzyme Protein ◽  
Ph Optimum ◽  
Substrate Reduction ◽  
Noncompetitive Inhibitor ◽  
Ph Dependent ◽  
Broad Specificity

Pea alcohol dehydrogenase (EC 1.1.1.1) shows a broad specificity with respect to aldehydes and alcohols. The pH-optimum of substrate oxidation is 8.7 and of substrate reduction 7.0. The enzyme is inhibited by ATP, adenosine, and adenine. The inhibition is competitive with respect to NAD. The inhibition by ATP is pH-dependent. The competitive character of the inhibition by adenine and its derivatives with respect to NAD indicates the importance of the adenine moiety of the coenzyme for its binding to the enzyme. Phenanthroline is a competitive inhibitor with respect to NAD, a mixed inhibitor with respect to ethanol and a noncompetitive inhibitor with respect to acetaldehyde. Experiments carried out simultaneously with ATP and phenanthroline show that the adenine moiety of NAD does not bind via the zinc atom to the enzyme protein.

Evidence for the role of carboxyl groups in activity of endopolygalacturonase of Aspergillus niger. Chemical modification by carbodiimide reagent

1990 ◽  
Vol 55 (5) ◽  
pp. 1389-1395 ◽  
Author(s):  
Lubomíra Rexová-Benková
Keyword(s):  
Enzyme Activity ◽  
Aspergillus Niger ◽  
Competitive Inhibitor ◽  
Enzyme Inactivation ◽  
Pectic Acid ◽  
Tyrosine Residues ◽  
Group Modification ◽  
Glycine Ethyl Ester ◽  
Decreasing Ph

Endopolygalacturonase (E.C. 3.2.1.15) of Aspergillus niger was modified with 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide and glycine ethyl ester. The modification resulted in total irreversible inactivation of the enzyme and derivatization of carboxyl acid residues and tyrosine residues. The treatment of the modified enzyme with hydroxylamine led to a restoration of modified tyrosine residues but not to reactivation of the enzyme. The inactivation with carbodiimide was pH dependent, the rate of inactivation increased with decreasing pH. Tri(D-galactosiduronic acid), a competitive inhibitor, or crosslinked pectic acid protected the enzyme against the inactivation. In bioaffinity chromatography of partially inactivated endopolygalacturonase, all residual enzyme activity was retained on the adsorbent while all inactive fraction passed without retardation through the column. On the basis of these results, as well as proximity of the rate constants for enzyme inactivation and the carboxyl group modification it is suggested that the loss of endopolygalacturonase activity is due to the modification of carboxylic acid residues and that at least one is essential for enzyme activity.

Acetyl-CoA hydrolase: relation between activity and cholesterol metabolism in rat

1988 ◽  
Vol 255 (5) ◽  
pp. R724-R730
Author(s):  
S. Ebisuno ◽  
F. Isohashi ◽  
Y. Nakanishi ◽  
Y. Sakamoto
Keyword(s):  
Enzyme Activity ◽  
Rat Liver ◽  
Cholesterol Metabolism ◽  
Cholesterol Biosynthesis ◽  
Physiological Role ◽  
Competitive Inhibitor ◽  
Isobutyric Acid ◽  
Enzyme Linked Immunosorbent Assay ◽  
Acetyl Coa ◽  
Coa Hydrolase

To examine whether cytosolic acetyl-CoA hydrolase in rat liver is involved in regulation of cholesterol biosynthesis, we investigated the alteration of the enzyme activity under conditions of stimulation (cholestyramine treatment) and suppression [cholesterol feeding, a potent competitive inhibitor of microsomal 3-hydroxy-3-methylglutaryl-CoA reductase (CS 514) treatment, and a hypolipidemic drug [alpha-(p-chlorophenoxy)isobutyric acid, CPIB] injection) of cholesterol biosynthesis. The enzyme activity in rat liver increased significantly in the early diabetic, cholesterol-fed, CS 514-, and CPIB-treated groups, but no change in its activity was observed in chronic diabetic groups. Cholestyramine treatment to cholesterol-fed rats made the enzyme activity return to the initial level. When chronic diabetic rats were given a cholesterol diet or treated with CS 514 or CPIB, the activity increased significantly. Inhibition of cholesterol biosynthesis caused by these treatments induced increase in the enzyme activity with increase in the enzyme protein, judging from results obtained by enzyme-linked immunosorbent assay. These results suggest that this enzyme has a physiological role in maintenance of the equilibrium between the cytosolic acetyl-CoA concentration and CoA-SH pool for cholesterol metabolism.

Pyruvate carboxylase of Aspergillus niger: kinetic study of a biotin-containg carboxylase

1969 ◽  
Vol 47 (7) ◽  
pp. 697-710 ◽  
Author(s):  
Helen A. Feir ◽  
Isamu Suzuki
Keyword(s):  
Enzyme Activity ◽  
Aspergillus Niger ◽  
Pyruvate Carboxylase ◽  
Active Sites ◽  
Kinetic Studies ◽  
Kinetic Mechanism ◽  
Product Inhibition ◽  
Ph Optimum ◽  
Metal Cofactor ◽  
Michaelis Constants

Pyruvate carboxylase was partially purified from Aspergillus niger and the properties were studied. The enzyme was found to be cold-labile and protected by 25% glycerol. The pH optimum was determined to be 7.9–8.0. The enzyme was shown to be a biotin-containing enzyme by its inactivation by avidin and protection against such inactivation by biotin. The enzyme activity was stimulated by K+ ions and inhibited by Na+ ions. Acetyl-CoA had no effect on enzyme activity, but L-aspartate was inhibitory. Apparent Michaelis constants were determined for the substrates and metal cofactor involved, i.e. pyruvate, ATP, bicarbonate, and Mg2+.Initial-velocity studies were carried out at varied concentrations of substrates in order to determine the true Michaelis constants and to elucidate the kinetic mechanism of reaction. Product-inhibition studies were carried out with each product (ADP, Pi, and oxalacetate) in combination with every substrate (ATP, bicarbonate, and pyruvate). From these kinetic studies and the existing knowledge on biotin-containing carboxylases, a mechanism was proposed for the action of pyruvate carboxylase which involves three independently active sites on the enzyme, one for each substrate. The interactions between the sites were visualized as being mediated by carboxybiotin formed on the enzyme. A steady-state rate equation was derived that satisfied kinetic results obtained.

Ornithine transcarbamylase from Mycobacterium smegmatis ATCC 14468: purification, properties, and reaction mechanism

1986 ◽  
Vol 64 (12) ◽  
pp. 1349-1355 ◽  
Author(s):  
Suhail Ahmad ◽  
R. K. Bhatnagar ◽  
T. A. Venkitasubramanian
Keyword(s):  
Enzyme Activity ◽  
Reaction Mechanism ◽  
Mycobacterium Smegmatis ◽  
Kinetic Mechanism ◽  
Competitive Inhibitor ◽  
Ornithine Transcarbamylase ◽  
Carbamyl Phosphate ◽  
Michaelis Constants ◽  
Variable Substrate ◽  
Uncompetitive Inhibitor

Ornithine transcarbamylase (EC 2.1.3.3) has been purified 980-fold from Mycobacterium smegmatis and has a molecular weight of 116 000. Initial velocity determinations indicated that the reaction proceeds via a sequential kinetic mechanism. The limiting Michaelis constants for carbamyl phosphate (KmA) and ornithine (KmB) and the dissociation constant for carbamyl phospate (Kia) were found to be 0.20, 0.25, and 0.07 mM, respectively. Ornithine at higher concentrations acted as an uncompetitive inhibitor when carbamyl phosphate was the variable substrate. Phosphate was a competitive inhibitor with carbamyl phosphate as variable substrate and showed noncompetitive or mixed type inhibition when ornithine was the variable substrate. Norvaline acted as a competitive inhibitor with ornithine as variable substrate and as an uncompetitive inhibitor when carbamyl phophate was the variable substrate. Such inhibitory patterns are characteristic of reactions that proceed via sequential ordered mechanisms. Although the enzyme activity was strongly inhibited by arginine, several arginine analogs had no effect on the enzyme activity. The results suggest that, even though the enzyme from M. smegmatis is unique in the sense that it is feedback inhibited by arginine, the reaction mechanism is similar to the ornithine transcarbamylase isolated from other microorganisms.

scholarly journals Kinetic properties of the partially purified pyruvate dehydrogenase complex of ox brain

1973 ◽  
Vol 131 (1) ◽  
pp. 31-37 ◽  
Author(s):  
John P. Blass ◽  
Carole A. Lewis
Keyword(s):  
Pyruvate Dehydrogenase ◽  
Tricarboxylic Acid Cycle ◽  
Pyruvate Dehydrogenase Complex ◽  
Kinetic Properties ◽  
Acetyl Coa ◽  
Ph Optimum ◽  
Michaelis Constants ◽  
High Concentrations ◽  
Similar Preparation ◽  
Dehydrogenase Complex

The properties of a purified preparation of the pyruvate dehydrogenase complex from ox brain have been compared with those of a similar preparation from ox kidney. A broad pH optimum around 7.8, similar dependence on ionic strength, and independence of the nature of the buffer anions or cations characterized preparations from both tissues. Michaelis constants for the binding of pyruvate, thiamin pyrophosphate, NAD+ and CoA were also similar. Enzyme from both tissues was inhibited by NADH, by copper and other heavy metals, by high concentrations of tricarboxylic acid-cycle intermediates, and by preincubation with ATP. Acetyl-CoA itself did not appear to inhibit these preparations, although some commercial preparations of acetyl-CoA did contain an inhibitor. Although oxaloacetate and α-oxobutyrate were weak inhibitors, a number of other α-oxo acids including phenylpyruvate did not inhibit. The properties of the pyruvate dehydrogenase complex from brain and kidney appeared similar.

scholarly journals Inhibition of Butyrylcholinesterase and Human Monoamine Oxidase-B by the Coumarin Glycyrol and Liquiritigenin Isolated from Glycyrrhiza uralensis

Molecules ◽  
2020 ◽  
Vol 25 (17) ◽  
pp. 3896
Author(s):  
Geum Seok Jeong ◽  
Myung-Gyun Kang ◽  
Joon Yeop Lee ◽  
Sang Ryong Lee ◽  
Daeui Park ◽  
...  
Keyword(s):  
Monoamine Oxidase ◽  
Binding Affinity ◽  
Competitive Inhibitor ◽  
Glycyrrhiza Uralensis ◽  
Form Hydrogen Bond ◽  
Docking Simulations ◽  
Mao B ◽  
Mao A ◽  
Ic50 Values ◽  
Noncompetitive Inhibitor

Eight compounds were isolated from the roots of Glycyrrhiza uralensis and tested for cholinesterase (ChE) and monoamine oxidase (MAO) inhibitory activities. The coumarin glycyrol (GC) effectively inhibited butyrylcholinesterase (BChE) and acetylcholinesterase (AChE) with IC50 values of 7.22 and 14.77 µM, respectively, and also moderately inhibited MAO-B (29.48 µM). Six of the other seven compounds only weakly inhibited AChE and BChE, whereas liquiritin apioside moderately inhibited AChE (IC50 = 36.68 µM). Liquiritigenin (LG) potently inhibited MAO-B (IC50 = 0.098 µM) and MAO-A (IC50 = 0.27 µM), and liquiritin, a glycoside of LG, weakly inhibited MAO-B (>40 µM). GC was a reversible, noncompetitive inhibitor of BChE with a Ki value of 4.47 µM, and LG was a reversible competitive inhibitor of MAO-B with a Ki value of 0.024 µM. Docking simulations showed that the binding affinity of GC for BChE (−7.8 kcal/mol) was greater than its affinity for AChE (−7.1 kcal/mol), and suggested that GC interacted with BChE at Thr284 and Val288 by hydrogen bonds (distances: 2.42 and 1.92 Å, respectively) beyond the ligand binding site of BChE, but that GC did not form hydrogen bond with AChE. The binding affinity of LG for MAO-B (−8.8 kcal/mol) was greater than its affinity for MAO-A (−7.9 kcal/mol). These findings suggest GC and LG should be considered promising compounds for the treatment of Alzheimer’s disease with multi-targeting activities.

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