Protein turnover in a moderately halophilic bacterium

1980 ◽  
Vol 26 (2) ◽  
pp. 196-203 ◽  
Author(s):  
A. R. Hipkiss ◽  
D. W. Armstrong ◽  
D. J. Kushner

Protein turnover was investigated in exponentially growing Vibrio costicola, a moderately halophilic bacterium that can grow in the NaCl concentration range 0.5–3.5 M (with optimal growth at about 1.0 M). In 1.0 or 1.5 M NaCl the breakdown rate of pulse-labelled proteins was about 5%/h whereas in 0.5 M NaCl breakdown was about 9%/h. These results are in contrast to those reported and observed in Escherichia coli which has a turnover rate of 1–2%/h in exponential growth. Growing E. coli in the highest possible NaCl concentration (1.0 M) did not significantly increase protein turnover. Shifting V. costicola from a higher to a lower NaCl concentration increased the rate of turnover of pulse-labelled proteins, whereas shifting it from a lower to a higher NaCl concentration decreased the rate of turnover. The critical factor in these experiments was not the NaCl concentration at which proteins were labelled but that at which the cells were subsequently incubated. The level of breakdown of long-labelled proteins was low (about 2%/h) and was not affected by shifts in NaCl concentration. Breakdown of pulse-labelled protein was inhibited by cyanide and tetracycline but not by iodoacetate, azide. or chloramphenicol. Treatment with streptomycin increased the rate of turnover. Turnover in cell-free systems was lower than in intact cells and was not inhibited by cyanide or tetracycline. It is suggested that the high rate of turnover, even at optimal NaCl concentrations, may reflect errors in protein synthesis, and that the effect of lower NaCl concentrations may be to alter "native" conformation and thus to increase the susceptibility of some of the properly made proteins to proteolysis.

2012 ◽  
Vol 62 (2) ◽  
pp. 390-396 ◽  
Author(s):  
Yong-Xia Wang ◽  
Ji-Hui Liu ◽  
Wei Xiao ◽  
Xiao-Xia Zhang ◽  
Yi-Qing Li ◽  
...  

A novel, moderately halophilic, rod-shaped bacterium, designated strain YIM D17T, was isolated from a sample of sediment from a salt mine in Yunnan, south-western China. The taxonomy of strain YIM D17T was investigated using a polyphasic approach. Strain YIM D17T was Gram-stain-negative, strictly aerobic and non-motile and formed pink colonies on marine agar. Optimal growth occurred at 37 °C, pH 7.5–8.0 and in the presence of 10–15 % (w/v) NaCl. The major menaquinone was MK-7. The polar lipid profile was composed predominantly of diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, one phospholipid, one glycolipid and one aminolipid. Minor amounts of other lipids were also detectable. The predominant cellular fatty acids were iso-C17 : 1ω9c/10-methyl-C16 : 0 (24.0 %), iso-C15 : 0 (23.6 %) and C16 : 1ω7c/C16 : 1ω6c (13.8 %). The DNA G+C content was 43.0 mol%. Phylogenetic analysis based on 16S rRNA gene sequence comparisons showed that the isolate formed a distinct clade with the genera Gracilimonas and Balneola (both in the phylum Bacteroidetes) and was related to the species Gracilimonas tropica, Balneola vulgaris and Balneola alkaliphila, with sequence similarities of 85.6 %, 83.0 % and 82.8 % to the respective type strains. On the basis of its phenotypic, chemotaxonomic and phylogenetic features, strain YIM D17T represents a novel species of a new genus, for which the name Fodinibius salinus gen. nov., sp. nov. is proposed. The type strain is YIM D17T ( = ACCC 10716T = DSM 21935T).


1998 ◽  
Vol 64 (10) ◽  
pp. 4095-4097 ◽  
Author(s):  
David Cánovas ◽  
Carmen Vargas ◽  
Laszlo N. Csonka ◽  
Antonio Ventosa ◽  
Joaquín J. Nieto

ABSTRACT The role of choline in osmoprotection in the moderate halophileHalomonas elongata has been examined. Transport and conversion of choline to betaine began immediately after addition of choline to the growth medium. Intracellular accumulation of betaine synthesized from choline was salt dependent up to 2.5 M NaCl. Oxidation of choline was enhanced at 2.0 M NaCl in the presence or absence of externally provided betaine. This indicates that the NaCl concentration in the growth medium has major effects on the choline-betaine pathway of H. elongata.


2015 ◽  
Vol 65 (Pt_2) ◽  
pp. 375-380 ◽  
Author(s):  
Jae-Chan Lee ◽  
Young-Sook Kim ◽  
Bong-Sik Yun ◽  
Kyung-Sook Whang

A Gram-stain-positive, moderately halophilic bacterium, designated BH043T, was isolated from saltern soil of Gomso in Korea. Cells were motile rods, producing ellipsoidal endospores at a terminal position in swollen sporangia. Strain BH043T was strictly aerobic, grew at pH 6.0–10.0 (optimal growth at pH 7.5), at 10–55 °C (optimal growth at 30 °C) and at salinities of 1–20 % (w/v) NaCl, growing optimally with 7 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequence indicated that strain BH043T belongs to the family Bacillaceae and was most closely related to the type strains of the five recognized species of the genus Pontibacillus , showing sequence similarity to Pontibacillus yanchengensis Y32T (97.5 % similarity), Pontibacillus marinus BH030004T (97.4 %), Pontibacillus chungwhensis BH030062T (97.0 %), Pontibacillus litoralis JSM 072002T (96.4 %) and Pontibacillus halophilus JSM 076056T (96.2 %). The major cellular fatty acids of strain BH043T were iso-C15 : 0 and anteiso-C15 : 0. The genomic DNA G+C content was 42.5 mol%. The major isoprenoid quinone was MK-7 and meso-diaminopimelic acid was present in the cell-wall peptidoglycan as the diagnostic diamino acid. The major polar lipids were phosphatidylethanolamine and phosphatidylglycerol. DNA–DNA relatedness between strain BH043T and the type strains of other species of the genus Pontibacillus , P. yanchengensis CGMCC 1.10680T and P. marinus KCTC 3917T and P. chungwhensis KCTC 3890T, was 35, 24 and 18 %, respectively. On the basis of polyphasic analysis from this study, strain BH043T represents a novel species of the genus Pontibacillus for which the name Pontibacillus salicampi sp. nov. is proposed. The type strain is BH043T ( = KACC 17607T = NBRC 109831T = NCAIM B.02529T).


2011 ◽  
Vol 61 (5) ◽  
pp. 1127-1132 ◽  
Author(s):  
Xiaowei Wang ◽  
Yanfen Xue ◽  
Yanhe Ma

A Gram-stain-positive, rod-shaped, non-sporulating, motile and moderately halophilic bacterium, designated strain H96B60T, was isolated from a saline soil sample of the Qaidam basin, China. The strain was facultatively anaerobic. Major end products formed from glucose fermentation were acetate, ethanol and lactic acid. The cell-wall peptidoglycan contained meso-diaminopimelic acid as the diagnostic diamino acid. The isoprenoid quinone component was menaquinone-6 (MK-6). The predominant cellular fatty acids were C16 : 0, anteiso-C13 : 0 and anteiso-C15 : 0. The genomic DNA G+C content of strain H96B60T was 36.2 mol%. Phylogenetic analysis based on comparative 16S rRNA gene sequences indicated that strain H96B60T represented a novel phyletic lineage within the family Bacillaceae and was related most closely to Halolactibacillus species (96.1–96.4 % similarity). Based on the phenotypic, chemotaxonomic and phylogenetic data presented, strain H96B60T is considered to represent a novel species of a new genus, for which the name Streptohalobacillus salinus gen. nov., sp. nov. is proposed. The type strain of Streptohalobacillus salinus is H96B60T ( = DSM 22440T  = CGMCC 1.7733T).


2017 ◽  
Vol 199 (9) ◽  
pp. 1277-1281 ◽  
Author(s):  
Tong-Wei Guan ◽  
Lei Tian ◽  
En-Yuan Li ◽  
Shu-Kun Tang ◽  
Xiao-Ping Zhang

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