Alkaline phosphatases of Neurospora crassa. Part III. Effects of pH and mechanism of action

1973 ◽  
Vol 19 (1) ◽  
pp. 135-146 ◽  
Author(s):  
F. W. J. Davis ◽  
Howard Lees
Keyword(s):  
Neurospora Crassa ◽  
Substrate Concentration ◽  
Substrate Inhibition ◽  
Product Inhibition ◽  
Ph Effects ◽  
Alkaline Phosphatases ◽  
Ph Optimum ◽  
Nitrophenyl Phosphate ◽  
Hydroxyl Ion ◽  
Effects Of Ph

The effects of pH on the activity of a highly purified constitutive alkaline phosphatase from Neurospora crassa were studied. The pH optimum for the reaction was a linear function of the logarithm of the substrate concentration, as is typical for alkaline phosphatases. Other pH effects were complex and Vmax or pKm versus pH plots differed for the two substrates used and from similar plots prepared with the repressible enzyme from this or other sources. The Km for p-nitrophenyl phosphate increased 200-fold over the pH range 7.0–8.7. Substrate inhibition was more pronounced at low than high pH. Lineweaver-Burk plots were non-linear at high substrate concentration but linear at low substrate concentration. Substrate inhibition by glucose 6-phosphate was not observed.The data are consistent with the hypothesis that hydroxyl ion is a second substrate for the enzyme and is an activator at high and an inhibitor at low p-nitrophenyl phosphate and glucose 6-phosphate concentrations. A Bi-Bi mechanism with random substrate addition, dead-end substrate, and product inhibition, having ordered release of products is discussed and is consistent with kinetic and pH studies. A two-site model for the active center of the enzyme is presented to account for alternate product inhibition data.

Alkaline phosphatases of Neurospora crassa. Part II product inhibition studies

1972 ◽  
Vol 18 (4) ◽  
pp. 407-421 ◽  
Author(s):  
F. W. J. Davis ◽  
Howard Lees
Keyword(s):  
Neurospora Crassa ◽  
Competitive Inhibitor ◽  
Product Inhibition ◽  
Nitrophenyl Phosphate ◽  
Wide Range ◽  
Phosphate Hydrolysis ◽  
Non Linear ◽  
Inhibition Studies ◽  
Enzyme Complexes ◽  
Hydrolysis Of

A partially purified preparation of the constitutive alkaline phosphatase from Neurospora crassa, containing two electrophoretically distinct activities was used in initial studies of product inhibition patterns. Inorganic phosphate was shown to be a linear competitive inhibitor, and p-nitrophenol to be a non-linear, non-competitive inhibitor of p-nitrophenyl phosphate hydrolysis. Glycerol was shown to be a linear non-competitive inhibitor of β-glycerophosphate hydrolysis.A purification procedure whereby one enzyme activity could be obtained free of the second was devised. The purified enzyme catalyzed the hydrolysis of a wide range of substrates and had a molecular weight of 111 000. Its hydrolysis of glucose 6-phosphate was competitively inhibited by phosphate and non-competitively inhibited by glucose. Both inhibitions were linear. Hydrolysis of p-nitrophenyl phosphate was competitively inhibited by phosphate in a linear manner, but p-nitrophenol was a non-linear, non-competitive inhibitor. Alternate product inhibition by glucose was linear competitive. No inhibition by p-nitrophenol of glucose 6-phosphate hydrolysis could be detected.The inhibition data for glucose 6-phosphate and β-glycerophosphate may be consistent with an ordered Uni-Bi mechanism expanded to include one or more isomerizations of enzyme complexes. The postulation of a different mechanism involving alternate pathways is probably required to explain the data obtained when p-nitrophenyl phosphate was the substrate.

scholarly journals The effects of pH and citrate on the activity of nicotinamide–adenine dinucleotide-specific isocitrate dehydrogenase from pea mitochondria

1969 ◽  
Vol 113 (5) ◽  
pp. 813-820 ◽  
Author(s):  
G. F. Cox ◽  
D. D. Davies
Keyword(s):  
Density Gradient ◽  
Isocitrate Dehydrogenase ◽  
Nicotinamide Adenine Dinucleotide ◽  
Substrate Concentration ◽  
Density Gradient Centrifugation ◽  
Gradient Centrifugation ◽  
Nicotinamide Adenine ◽  
Ph Optimum ◽  
Effects Of Ph ◽  
Metabolic Significance

1. The effect of pH on the co-operative activation of the NAD-specific isocitrate dehydrogenase from pea mitochondria by isocitrate is shown. 2. The interlinked effects of pH on the affinity of the NAD-specific isocitrate dehydrogenase for isocitrate and the dependence of the pH optimum on the substrate concentration are presented. 3. A consideration of the conditions of pH and substrate concentration under which citrate activates the NAD-specific isocitrate dehydrogenase demonstrates similarities between the binding of isocitrate and citrate. 4. A comparison of the effects of citrate and pH on the gross structure of the enzyme is investigated by density-gradient centrifugation. 5. The kinetic interpretations of these results are briefly considered. 6. The metabolic significance of these studies is discussed.

Alkaline phosphatase. I. Kinetics and inhibition by levamisole of purified isoenzymes from humans.

1976 ◽  
Vol 22 (7) ◽  
pp. 972-976 ◽  
Author(s):  
H Van Belle
Keyword(s):  
Alkaline Phosphatase ◽  
Substrate Concentration ◽  
Human Liver ◽  
Alkaline Phosphatases ◽  
Mechanism Of Inhibition ◽  
Optimum Ph ◽  
Alkaline Phosphatase Isoenzymes

Abstract I studied the kinetics and sensitivity toward inhibition by levamisole and R 8231 of the most important human alkaline phosphatase isoenzymes. N-Ethylaminoethanol proved superior to the now widely used diethanolamine buffer, especially for the enzymes from the intestine and placenta, behaving as an uncompetitive activator. The optimum pH largely depends on the substrate concentration. The addition of Mg2+ has no effect on the activities. The meaning of Km-values for alkaline phosphatases is questioned. Isoenzymes from human liver, bone, kidney, and spleen are strongly inhibited by levamisole or R 8231 at concentrations that barely affect the enzymes from intestine or placenta. The inhibition is stereospecific, uncompetitive, and not changed by Mg2+. Inhibition is counteracted by increasing concentrations of N-ethylaminoethanol. The mechanism of inhibition is suggested to be formation of a complex with the phosphoenzyme.

ESTIMATION OF MARSUPIAL RENIN USING MARSUPIAL RENIN-SUBSTRATE

1972 ◽  
Vol 53 (1) ◽  
pp. 125-130 ◽  
Author(s):  
PAMELA A. SIMPSON ◽  
J. R. BLAIR-WEST
Keyword(s):  
Substrate Concentration ◽  
Structural Difference ◽  
Plasma Renin ◽  
Angiotensin I ◽  
Ph Optimum ◽  
Ph Profile ◽  
Renin Substrate ◽  
Grey Kangaroo ◽  
Rate Of Reaction ◽  
Highly Correlated

SUMMARY Bilateral nephrectomy of an Eastern Grey kangaroo (Macropus giganteus) increased plasma renin-substrate concentration approximately tenfold when compared with intact kangaroos. A preparation made from this plasma had a renin-substrate concentration of 3000 ng/ml. A pH profile of rate of reaction with pig renin had an optimum at pH 5·39. By comparison, the pH optimum of sheep renin-substrate was pH 6·15. Estimates of plasma renin concentration for kangaroos, wombats and wallabies, using kangaroo renin-substrate or sheep renin-substrate were highly correlated. Results from incubation with sheep renin-substrate were greater and hence indicate the advantage in using this substrate for marsupial renin estimation. The consistently large difference between sheep and kangaroo renin-substrate when incubated with renin from marsupial and eutherian species appears to be due to a structural difference between the two substrates, probably near the C-terminal end of the angiotensin I molecule.

scholarly journals Purification and characterization of two human erythrocyte arylamidases preferentially hydrolysing N-terminal arginine or lysine residues

1978 ◽  
Vol 175 (3) ◽  
pp. 1051-1067 ◽  
Author(s):  
K K Mäkinen ◽  
P L Mäkinen
Keyword(s):  
Substrate Inhibition ◽  
Gel Filtration ◽  
Deae Cellulose ◽  
Gel Permeation Chromatography ◽  
Ph Optimum ◽  
Preparative Scale ◽  
Molecular Weights ◽  
Gel Permeation ◽  
Lysine Residues ◽  
Enzyme I

Two arylamidases (I and II) were purified from human erythrocytes by a procedure that comprised removal of haemoglobin from disrupted cells with CM-Sephadex D-50, followed by treatment of the haemoglobin-free preparation subsequently with DEAE-cellulose, gel-permeation chromatography on Sephadex G-200, gradient solubilization on Celite, isoelectric focusing in a pH gradient from 4 to 6, gel-permeation chromatography on Sephadex G-100 (superfine), and finally affinity chromatography on Sepharose 4B covalently coupled to L-arginine. In preparative-scale purifications, enzymes I and II were separated at the second gel-permeation chromatography. Enzyme II was obtained as a homogeneous protein, as shown by several criteria. Enzyme I hydrolysed, with decreasing rates, the L-amino acid 2-naphtylamides of lysine, arginine, alanine, methionine, phenylalanine and leucine, and the reactions were slightly inhibited by 0.2 M-NaCl. Enzyme II hydrolysed most rapidly the corresponding derivatives of arginine, leucine, valine, methionine, proline and alanine, in that order, and the hydrolyses were strongly dependent on Cl-. The hydrolysis of these substrates proceeded rapidly at physiological Cl- concentration (0.15 M). The molecular weights (by gel filtration) of enzymes I and II were 85 000 and 52 500 respectively. The pH optimum was approx. 7.2 for both enzymes. The isoelectric point of enzyme II was approx. 4.8. Enzyme I was activated by Co2+, which did not affect enzyme II to any noticeable extent. The kinetics of reactions catalysed by enzyme I were characterized by strong substrate inhibition, but enzyme II was not inhibited by high substrate concentrations. The Cl- activated enzyme II also showed endopeptidase activity in hydrolysing bradykinin.

scholarly journals The effects of diphenyleneiodonium and of 2,4-dichlorodiphenyleneiodonium on mitochondrial reactions. Mechanism of the inhibition of oxygen uptake as a consequence of the catalysis of the chloride/hydroxyl-ion exchange

1976 ◽  
Vol 158 (2) ◽  
pp. 317-326 ◽  
Author(s):  
S J Gatley ◽  
H S A Sherratt
Keyword(s):  
Oxygen Uptake ◽  
Absolute Rate ◽  
Proton Extrusion ◽  
Ph Optimum ◽  
Succinate Oxidation ◽  
Hydroxyl Ion ◽  
The Matrix ◽  
Rate Of Decay ◽  
Triton X ◽  
Reactions Mechanism

1. Increasing the substrate concentration only decreased the inhibition of mitochondrial oxidations by diphenyleneiodonium or by 2,4-dichlorophenyleneiodonium by a small amount. 2. Diphenyleneiodonium and 2,4-dichlorodiphenyleneiodonium lowered the amounts of succinate, citrate and glutamate accumulated in the matrix of mitochondria in the presence of Cl-, but not in its absences. 2,4-Dichlorodiphenyleneiodonium decreased the accumulation of substrates by mitochondria oxidizing glycerol 3-phosphate. 3. Diphenyleneiodonium caused an alkalinization of the medium with an anaerobic suspension of mitochondria, which was only partly reversed by Triton X-100. 4. The rate of proton extrusion by mitochondria oxidizing succinate was not altered by diphenyleneiodonium or by 2,4-dichlorodiphenyleneiodium, although the rate of decay of proton pulses was increased. 5. 2,4-Dichlorodiphenyleneiodonium shifted the pH optimum for succinate oxidation by intact mitochondria from pH 7.2 to 8.0, whereas there was no effect on that of freeze-thawed mitochondria, which was pH 8.0. 6. The concentration of 2,4-dichlorophenyleneiodonium required to inhibit respiration by 50% is less the higher the absolute rate of oxygen uptake. 7. EDTA, but not EGTA [ethanedioxybis(ethylamine)-tetra-acetic acid] increased the inhibition of respiration by diphenyleneiodonium, 2,4-dichlorodiphenyleneiodonium and by tri-n-propyltin. 8. It is concluded that diphenyleneiodonium and 2,4-dichlorodiphenyleneiodonium limit respiration in Cl--containing medium by causing an acidification of the matrix, and that there are pH-sensitive sites in the respiratory chain between NADH and succinate, and between succinate and cytochrome c.

scholarly journals Characterization of the Two Neurospora crassa Cellobiose Dehydrogenases and Their Connection to Oxidative Cellulose Degradation

2012 ◽  
Vol 78 (17) ◽  
pp. 6161-6171 ◽  
Author(s):  
Christoph Sygmund ◽  
Daniel Kracher ◽  
Stefan Scheiblbrandner ◽  
Kawah Zahma ◽  
Alfons K. G. Felice ◽  
...  
Keyword(s):  
Neurospora Crassa ◽  
Enzyme System ◽  
Cellulose Degradation ◽  
Cellulose Hydrolysis ◽  
Carbohydrate Binding ◽  
Ph Optimum ◽  
Content Type ◽  
Polysaccharide Monooxygenase

ABSTRACTThe genome ofNeurospora crassaencodes two different cellobiose dehydrogenases (CDHs) with a sequence identity of only 53%. So far, only CDH IIA, which is induced during growth on cellulose and features a C-terminal carbohydrate binding module (CBM), was detected in the secretome ofN. crassaand preliminarily characterized. CDH IIB is not significantly upregulated during growth on cellulosic material and lacks a CBM. Since CDH IIB could not be identified in the secretome, both CDHs were recombinantly produced inPichia pastoris. With the cytochrome domain-dependent one-electron acceptor cytochromec, CDH IIA has a narrower and more acidic pH optimum than CDH IIB. Interestingly, the catalytic efficiencies of both CDHs for carbohydrates are rather similar, but CDH IIA exhibits 4- to 5-times-higher apparent catalytic constants (kcatandKmvalues) than CDH IIB for most tested carbohydrates. A third major difference is the 65-mV-lower redox potential of the hemebcofactor in the cytochrome domain of CDH IIA than CDH IIB. To study the interaction with a member of the glycoside hydrolase 61 family, the copper-dependent polysaccharide monooxygenase GH61-3 (NCU02916) fromN. crassawas expressed inP. pastoris. A pH-dependent electron transfer from both CDHs via their cytochrome domains to GH61-3 was observed. The different properties of CDH IIA and CDH IIB and their effect on interactions with GH61-3 are discussed in regard to the proposedin vivofunction of the CDH/GH61 enzyme system in oxidative cellulose hydrolysis.

LINGCOD MUSCLE PHOSPHOMONOESTERASES: I. ACID PHOSPHATASES THAT HYDROLYZEp-NITROPHENYL PHOSPHATE

1960 ◽  
Vol 38 (1) ◽  
pp. 605-612 ◽  
Author(s):  
Neil Tomlinson ◽  
R. A. J. Warren
Keyword(s):  
Metal Ions ◽  
The Other ◽  
Acid Phosphatases ◽  
Free Base ◽  
Ph Optimum ◽  
Ophiodon Elongatus ◽  
Nitrophenyl Phosphate ◽  
Diethylaminoethyl Cellulose ◽  
Ph Range ◽  
Acid Phosphomonoesterase

Five fractions (A to E), each possessing acid phosphomonoesterase activity, were separated from an aqueous extract of the muscle of lingcod (Ophiodon elongatus) by stepwise chromatography on diethylaminoethyl cellulose in the free-base form.Fraction A required Zn++or Mn++for activity, was inhibited by heparin, and had its pH optimum at 6.0. Fraction E required Zn++for activity, was not inhibited by heparin, and had its pH optimum at 5.5. Fractions B, C, and D did not require metal ions for activity, and were distinguished from each other by differences in response to pH, cysteine, ethylenediaminetetraacetate, fluoride, and tartrate.The pH range over which fraction A was active was shifted to slightly higher values when Mn++was the activator rather than Zn++. Also, A was inhibited strongly by cysteine when activated by Zn++, but not when activated by Mn++. Data are presented that indicate these differences were due to different properties of the activating ions, rather than to the presence in fraction A of two enzymes, one activated by Zn++and the other by Mn++.

scholarly journals Purification and some properties of an IMP-specific 5′-nucleotidase from yeast

1994 ◽  
Vol 298 (3) ◽  
pp. 593-598 ◽  
Author(s):  
R Itoh
Keyword(s):  
Molecular Mass ◽  
Substrate Concentration ◽  
Soluble Protein ◽  
The Other ◽  
Metal Salts ◽  
Bivalent Metal ◽  
Pyrimidine Nucleotides ◽  
Ph Optimum ◽  
A Subunit ◽  
Purine And Pyrimidine Nucleotides

An IMP-hydrolysing enzyme was purified to homogeneity from yeast extract. It was a soluble protein with an apparent molecular mass of 220 kDa, with a subunit molecular mass of 55 kDa. It was highly specific for IMP, and there was virtually no detectable activity with the other purine and pyrimidine nucleotides tested, including AMP and dIMP. The enzyme had a pH optimum of 6.0-6.5. Its activity was absolutely dependent on bivalent metal salts: Mg2+ was most potent, followed by Co2+ and Mn2+. The velocity/substrate-concentration plot of the enzyme was slightly sigmoidal (h = 1.7) and the s0.5 was 0.4 mM. ATP stimulated the enzyme by decreasing both h and s0.5. Diadenosine tetraphosphate stimulated the enzyme as effectively as ATP. Although the properties of the enzyme are similar to those of the IMP/GMP 5′-nucleotidase identified in various animals [Itoh (1993) Comp. Biochem. Physiol. 105B, 13-19], the substrate specificity of the former was much more strict than the latter.

scholarly journals Inhibitory effect of okadaic acid on the p-nitrophenyl phosphate phosphatase activity of protein phosphatases

1991 ◽  
Vol 275 (1) ◽  
pp. 233-239 ◽  
Author(s):  
A Takai ◽  
G Mieskes
Keyword(s):  
Phosphatase Activity ◽  
Okadaic Acid ◽  
Protein Phosphatase ◽  
Protein Phosphatases ◽  
Inhibitory Effect ◽  
Enzyme Concentration ◽  
Alkaline Phosphatases ◽  
Nitrophenyl Phosphate ◽  
Type 1 Phosphatase

The phosphatase activities of type 2A, type 1 and type 2C protein phosphatase preparations were measured against p-nitrophenyl phosphate (pNPP), a commonly used substrate for alkaline phosphatases. Of the three types of phosphatase examined, the type 2A phosphatase exhibited an especially high pNPP phosphatase activity (119 +/- 8 mumol/min per mg of protein; n = 4). This activity was strongly inhibited by pico- to nano-molar concentrations of okadaic acid, a potent inhibitor of type 2A and type 1 protein phosphatases that has been shown to have no effect on alkaline phosphatases. The dose-inhibition relationship was markedly shifted to the right and became steeper by increasing the concentration of the enzyme, as predicted by the kinetic theory for tightly binding inhibitors. The enzyme concentration estimated by titration with okadaic acid agreed well with that calculated from the protein content and the molecular mass for type 2A phosphatase. These results strongly support the idea that the pNPP phosphatase activity is intrinsic to type 2A protein phosphatase and is not due to contamination by alkaline phosphatases. pNPP was also dephosphorylated, but at much lower rates, by type 1 phosphatase (6.4 +/- 8 nmol/min per mg of protein; n = 4) and type 2C phosphatase (1.2 +/- 3 nmol/min per mg of protein; n = 4). The pNPP phosphatase activity of the type 1 phosphatase preparation shows a susceptibility to okadaic acid similar to that of its protein phosphatase activity, whereas it was interestingly very resistant to inhibitor 2, an endogenous inhibitory factor of type 1 protein phosphatase. The pNPP phosphatase activity of type 2C phosphatase preparation was not affected by up to 10 microM-okadaic acid.

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