Molecular mapping of wheat. Homoeologous group 2

Genome ◽  
1995 ◽  
Vol 38 (3) ◽  
pp. 516-524 ◽  
Author(s):  
James C. Nelson ◽  
Allen E. Van Deynze ◽  
Mark E. Sorrells ◽  
Enrique Autrique ◽  
Yun Hai Lu ◽  
...  

A molecular-marker map of bread wheat having many markers in common with other grasses in the Gramineae family is a prerequisite for molecular level genetic studies and breeding in this crop species. We have constructed restriction fragment length polymorphism maps of the A-, B-, and D-genome chromosomes of homoeologous group 2 of hexaploid wheat (Triticum aestivum L. em. Thell) using 114 F7 lines from a synthetic × bread wheat cross and clones from 11 libraries. Chromosomes 2A, 2B, and 2D comprise 57, 60, and 56 markers and each spans about 200 cM. Comparisons between chromosomes are facilitated by 26 sets of homoeoloci. Genes mapped include a heterologous abscisic acid responsive locus cloned as pBS128, the epidermal waxiness inhibitor W21, and two presumed leaf rust and stem rust resistance genes. Anomalies suggesting ancestral rearrangements in chromosome 2B are pointed out and features of wheat group 2 chromosomes that are common to barley (Hordeum vulgare L.), rice (Oryza spp.), and T. tauschii are discussed.Key words: RFLP, wheat, waxy, rust.

Genetics ◽  
1995 ◽  
Vol 141 (2) ◽  
pp. 721-731 ◽  
Author(s):  
J C Nelson ◽  
M E Sorrells ◽  
A E Van Deynze ◽  
Y H Lu ◽  
M Atkinson ◽  
...  

Abstract A molecular-marker linkage map of hexaploid wheat (Triticum aestivum L. em. Thell) provides a framework for integration with teh classical genetic map and a record of the chromosomal rearrangements involved in the evolution of this crop species. We have constructed restriction fragment length polymorphism (RFLP) maps of the A-, B-, and D-genome chromosomes of homoeologous groups 4, 5, and 7 of wheat using 114 F7 lines from a synthetic X cultivated wheat cross and clones from 10 DNA libraries. Chromosomal breakpoints for known ancestral reciprocal translocations involving these chromosomes and for a known pericentric inversion on chromosome 4A were localized by linkage and aneuploid analysis. Known genes mapped include the major vernalization genes Vrn1 and Vrn3 on chromosome arms 5AL and 5DL, the red-coleoptile gene Rc1 on 7AS, and presumptively the leaf-rust (Puccinia recondita f.sp. tritici) resistance gene Lr34 on 7DS and the kernel-hardness gene Ha on 5DS. RFLP markers previously obtained for powdery-mildew (Blumeria graminis f.sp. tritici) resistance genes Pm2 and Pm1 were localized on chromosome arms 5DS and 7AL.


Genetics ◽  
1998 ◽  
Vol 149 (4) ◽  
pp. 2007-2023 ◽  
Author(s):  
Marion S Röder ◽  
Victor Korzun ◽  
Katja Wendehake ◽  
Jens Plaschke ◽  
Marie-Hélène Tixier ◽  
...  

Abstract Hexaploid bread wheat (Triticum aestivum L. em. Thell) is one of the world's most important crop plants and displays a very low level of intraspecific polymorphism. We report the development of highly polymorphic microsatellite markers using procedures optimized for the large wheat genome. The isolation of microsatellite-containing clones from hypomethylated regions of the wheat genome increased the proportion of useful markers almost twofold. The majority (80%) of primer sets developed are genome-specific and detect only a single locus in one of the three genomes of bread wheat (A, B, or D). Only 20% of the markers detect more than one locus. A total of 279 loci amplified by 230 primer sets were placed onto a genetic framework map composed of RFLPs previously mapped in the reference population of the International Triticeae Mapping Initiative (ITMI) Opata 85 × W7984. Sixty-five microsatellites were mapped at a LOD >2.5, and 214 microsatellites were assigned to the most likely intervals. Ninety-three loci were mapped to the A genome, 115 to the B genome, and 71 to the D genome. The markers are randomly distributed along the linkage map, with clustering in several centromeric regions.


Genome ◽  
2006 ◽  
Vol 49 (7) ◽  
pp. 729-734 ◽  
Author(s):  
R C Leach ◽  
I S Dundas ◽  
A Houben

The physical length of the rye segment of a 4BS.4BL–5RL translocation derived from the Cornell Wheat Selection 82a1-2-4-7 in a Triticum aestivum 'Chinese Spring' background was measured using genomic in situ hybridization (GISH) and found to be 16% of the long arm. The size of this translocation was similar to previously published GISH measurements of another 4BS.4BL–5RL translocation in a Triticum aestivum 'Viking' wheat background. Molecular maps of both 4BS.4BL–5RL translocations for 2 different wheat backgrounds were developed using RFLP analysis. The locations of the translocation breakpoints of the 2 4BS.4BL–5RL translocations were similar even though they arose in different populations. This suggests a unique property of the region at or near the translocation breakpoint that could be associated with their similarity and spontaneous formation. These segments of rye chromosome 5 also contain a gene for copper efficiency that improves the wheat's ability to cope with low-copper soils. Genetic markers in these maps can also be used to screen for copper efficiency in bread wheat lines derived from the Cornell Wheat Selection 82a1 2-4-7.Key words: Triticum aestivum, wheat–rye translocation, homoeologous group 4, homoeologous group 5, GISH, comparative map, copper efficiency, hairy peduncle.


2008 ◽  
Vol 117 (3) ◽  
pp. 321-331 ◽  
Author(s):  
Grit Haseneyer ◽  
Catherine Ravel ◽  
Mireille Dardevet ◽  
François Balfourier ◽  
Pierre Sourdille ◽  
...  

Author(s):  
Nicolae HODIŞAN ◽  
Gavrilă MORAR ◽  
Cristina-Maria NEAG

The paper presents the results of the allelopathic effect on the germination and growth of plants, immediately after springing, in the interaction between the invasive species Ambrosia artemisiifolia L. (common ragweed) and five crop species: wheat (Triticum aestivum L.), rye (Secale cereale L.), barley (Hordeum vulgare L.), rape (Brassica napus L.) and lucerne (Medicago sativa). The tests consisted in applying treatments with aqueous extracts obtained from young Ambrosia artemisiifolia L. plants, as well as from different vegetative organs harvested from mature plants (roots, leaves and seeds). The results show a highly significant inhibiting effect on the germination of wheat, rye, barley and rape seeds and an insignificant one in lucerne seeds. A strong inhibiting effect upon the growth of plants in early stages of vegetation was established in wheat and rape and a stimulation of growth in the same stage of vegetation in barley and lucerne.


Genome ◽  
2005 ◽  
Vol 48 (6) ◽  
pp. 1120-1126 ◽  
Author(s):  
Didier Lamoureux ◽  
Daniel G Peterson ◽  
Wanlong Li ◽  
John P Fellers ◽  
Bikram S Gill

We report the results of a study on the effectiveness of Cot filtration (CF) in the characterization of the gene space of bread wheat (Triticum aestivum L.), a large genome species (1C = 16 700 Mb) of tremendous agronomic importance. Using published Cot data as a guide, 2 genomic libraries for hexaploid wheat were constructed from the single-stranded DNA collected at Cot values > 1188 and 1639 M·s. Compared with sequences from a whole genome shotgun library from Aegilops tauschii (the D genome donor of bread wheat), the CF libraries exhibited 13.7-fold enrichment in genes, 5.8-fold enrichment in unknown low-copy sequences, and a 3-fold reduction in repetitive DNA. CF is twice as efficient as methylation filtration at enriching wheat genes. This research suggests that, with improvements, CF will be a highly useful tool in sequencing the gene space of wheat.Key words: gene enrichment, renaturation kinetics, gene-rich regions, bread wheat.


2007 ◽  
Vol 114 (7) ◽  
pp. 1173-1183 ◽  
Author(s):  
G. J. Rebetzke ◽  
M. H. Ellis ◽  
D. G. Bonnett ◽  
R. A. Richards

1980 ◽  
Vol 22 (2) ◽  
pp. 237-259 ◽  
Author(s):  
J. Dvořák

Genetic compensation of Agropyron chromosomes for wheat chromosomes in the male gametophyte and compensation of Agropyron chromosomes for wheat chromosomes in disomic substitutions were used to investigate relationships between the chromosomes of Agropyron elongatum (Host.) P.B. (2n = 2x = 14) and Triticum aestivum L. emend. Thell. (2n = 6x = 42). Gametophytic compensation indicated that A. elongatum chromosomes I, II, III, IV, and VII were related to wheat chromosomes of homoeologous groups 1, 7, 4, 3, and 6, respectively, and were designated 1E, 7E, 4E, 3E, and 6E. Chromosomes V and VI appeared to be related to homoeologous group 2. Other analyses showed that chromosomes V and VI originated from arm exchanges between chromosome 2E and other Agropyron chromosomes. An unaltered disome of Agropyron chromosome 2E was added to the wheat chromosome complement. In the disomic substitutions Agropyron chromosomes 1E, 6E, and 7E compensated for all three wheat homoeologues of the respective homoeologous groups. Chromosome 4E fully compensated for chromosome 4D but only partially for chromosomes 4A and 4B. Chromosomes V and VI compensated poorly or not at all for wheat chromosomes of group 2.


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