A DNA polymorphism from five inbred strains of the mouse identifies a functional class of domesticus-type Y chromosome that produces the same phenotypic distribution of gonadal hermaphrodites

Genome ◽  
1991 ◽  
Vol 34 (1) ◽  
pp. 96-104 ◽  
Author(s):  
Fred G. Biddle ◽  
Brenda A. Eales ◽  
Yutaka Nishioka
Keyword(s):  
Inbred Strain ◽  
Y Chromosome ◽  
Dna Polymorphism ◽  
Low Frequency ◽  
Inbred Strains ◽  
Functional Class ◽  
Low Frequencies ◽  
Testis Differentiation ◽  
Y Chromosomes ◽  
Functional Classes

The wild-derived CLA inbred strain of the house mouse contains a domesticus-type Y chromosome that lacks a 2.3-kb TaqI band with fragment 1 of the AC11 probe. The CLA Y chromosome also causes a low frequency of XY gonadal hermaphrodites when backcrossed to the C57BL/6J strain (F.G. Biddle and Y. Nishioka. 1988. Genome, 30: 870–878). A similar domesticus-type Y chromosome, lacking the 2.3-kb TaqI band has now been found in the four historical inbred strains AKR/J, MA/MyJ, PL/J, and RF/J. When backcrossed to C57BL/6J, these four Y chromosomes cause low frequencies of gonadal hermaphrodites similar to the CLA Y and phenotypic distributions of types of gonad are indistinguishable from that with the CLA Y. The absence of the 2.3-kb TaqI band appears to be a polymorphism among domesticus-type Y chromosomes that identifies one of the three functional classes that, so far, can be distinguished only by their effects on testis differentiation in backcross test fetuses with the C57BL/6J strain. Three other historical inbred strains, BUB/BnJ, ST/bJ, and SWR/J, with a domesticus-type Y chromosome but containing the 2.3-kb TaqI band, were also assayed. They permit normal testis development in backcross test fetuses with C57BL/6J.Key words: mouse, Y chromosome, gonadal hermaphrodites, primary sex determination.

scholarly journals Y-chromosomal DNA polymorphism in mouse inbred strains

1987 ◽  
Vol 50 (1) ◽  
pp. 69-72 ◽  
Author(s):  
Yutaka Nishioka
Keyword(s):  
Y Chromosome ◽  
Mus Musculus ◽  
Dna Polymorphism ◽  
Inbred Strains ◽  
Laboratory Mice ◽  
Wild Populations ◽  
Chromosomal Dna ◽  
Mus Musculus Musculus

SummaryMice are the most widely used experimental mammals, and many inbred strains are available. However, except for the relatively recent strains derived from known wild populations, the relationships between wild and laboratory mice are not well understood. Based on the Y-chromosomal restriction fragmentlength polymorphism, seventeen inbred strains were classified into two groups: strains with the Mus musculus musculus type Y chromosome and those with the M. m. domesticus type Y chromosome. We extended the survey to an additional twenty-two inbred strains. The M. m. musculus type Y chromosome was found in AEJ/GnLe, AAU/SsJ, BDP/J, BXSB/MpJ, DA/HuSn, HTG/GoSfSn, I/LnJ, LP/J, NZW/LacJ, RIIIS/J, SB/Le, SEA/GnJ, SF/CamEi, SK/CamEi, SM/J, WB/ReJ, WC/ReJ and YBR/Ei, while the M. m. domesticus type Y chromosome was present in BUB/BnJ, MA/MyJ, PL/J and ST/bJ.

Sex reversal in C57BL/6J-Y POS mice corrected by a Sry transgene

1995 ◽  
Vol 350 (1333) ◽  
pp. 263-269 ◽  
Keyword(s):  
Inbred Strain ◽  
Y Chromosome ◽  
Ovarian Tissue ◽  
Testicular Tissue ◽  
Gonadal Development ◽  
Sex Reversal ◽  
Dna Polymorphisms ◽  
Mus Domesticus ◽  
Y Chromosomes ◽  
Strain Background

C57BL/6J mice carrying a Mus domesticus poschiavinus Y chromosome (Y POS ) develop as females with ovarian tissue or as hermaphrodites with ovarian and testicular tissue. We tested the hypothesis that the Y-linked component of this inherited sex reversal is caused by the M. d. poschiavinus Y-linked testis determining gene (symbolized Tdy or Sry ) by examining gonadal development in C57BL/6J XY POS mice carrying a M. musculus allele of Sry as a transgene. We found that in the presence of the transgene, XY POS mice developed exclusively testicular tissue. This result indicates that the Sry allele carried on the Y PDS chromosome is responsible for development of ovarian tissue in the G57BL/6J inbred strain background. We discuss this finding in light of DNA polymorphisms present in Sry alleles carried by various M. domesticus and M.musculus Y chromosomes. In addition, we present a hypothesis concerning the timing of expression of the testicular and ovarian determining genes in the developing fetal gonad based on the organization of ovarian and testicular tissue in ovotestes.

scholarly journals Earless toads sense low frequencies but miss the high notes

2017 ◽  
Vol 284 (1864) ◽  
pp. 20171670 ◽  
Author(s):  
Molly C. Womack ◽  
Jakob Christensen-Dalsgaard ◽  
Luis A. Coloma ◽  
Juan C. Chaparro ◽  
Kim L. Hoke
Keyword(s):  
High Frequency ◽  
Species Differences ◽  
Low Frequency ◽  
Auditory Brainstem ◽  
Low Frequencies ◽  
Hearing Sensitivity ◽  
Sensory Pathways ◽  
Airborne Sound ◽  
Vibrational Sensitivity ◽  
Species Specific

Sensory losses or reductions are frequently attributed to relaxed selection. However, anuran species have lost tympanic middle ears many times, despite anurans' use of acoustic communication and the benefit of middle ears for hearing airborne sound. Here we determine whether pre-existing alternative sensory pathways enable anurans lacking tympanic middle ears (termed earless anurans) to hear airborne sound as well as eared species or to better sense vibrations in the environment. We used auditory brainstem recordings to compare hearing and vibrational sensitivity among 10 species (six eared, four earless) within the Neotropical true toad family (Bufonidae). We found that species lacking middle ears are less sensitive to high-frequency sounds, however, low-frequency hearing and vibrational sensitivity are equivalent between eared and earless species. Furthermore, extratympanic hearing sensitivity varies among earless species, highlighting potential species differences in extratympanic hearing mechanisms. We argue that ancestral bufonids may have sufficient extratympanic hearing and vibrational sensitivity such that earless lineages tolerated the loss of high frequency hearing sensitivity by adopting species-specific behavioural strategies to detect conspecifics, predators and prey.

A waveform inversion technique for measuring elastic wave attenuation in cylindrical bars

Geophysics ◽  
1992 ◽  
Vol 57 (6) ◽  
pp. 854-859 ◽  
Author(s):  
Xiao Ming Tang
Keyword(s):  
Elastic Wave ◽  
Wave Attenuation ◽  
Waveform Inversion ◽  
Finite Size ◽  
Low Frequency ◽  
Frequency Range ◽  
Multiple Reflections ◽  
Low Frequencies ◽  
The Time Domain ◽  
Attenuation Values

A new technique for measuring elastic wave attenuation in the frequency range of 10–150 kHz consists of measuring low‐frequency waveforms using two cylindrical bars of the same material but of different lengths. The attenuation is obtained through two steps. In the first, the waveform measured within the shorter bar is propagated to the length of the longer bar, and the distortion of the waveform due to the dispersion effect of the cylindrical waveguide is compensated. The second step is the inversion for the attenuation or Q of the bar material by minimizing the difference between the waveform propagated from the shorter bar and the waveform measured within the longer bar. The waveform inversion is performed in the time domain, and the waveforms can be appropriately truncated to avoid multiple reflections due to the finite size of the (shorter) sample, allowing attenuation to be measured at long wavelengths or low frequencies. The frequency range in which this technique operates fills the gap between the resonant bar measurement (∼10 kHz) and ultrasonic measurement (∼100–1000 kHz). By using the technique, attenuation values in a PVC (a highly attenuative) material and in Sierra White granite were measured in the frequency range of 40–140 kHz. The obtained attenuation values for the two materials are found to be reliable and consistent.

Methods to isolate retrograde and prograde Rayleigh-wave signals

2019 ◽  
Vol 219 (2) ◽  
pp. 975-994 ◽  
Author(s):  
Gabriel Gribler ◽  
T Dylan Mikesell
Keyword(s):  
Rayleigh Wave ◽  
Time Domain ◽  
Fundamental Mode ◽  
Poisson Ratio ◽  
Low Frequency ◽  
Wave Dispersion ◽  
Low Frequencies ◽  
Retrograde Motion ◽  
Mode Identification ◽  
Time Frequency

SUMMARY Estimating shear wave velocity with depth from Rayleigh-wave dispersion data is limited by the accuracy of fundamental and higher mode identification and characterization. In many cases, the fundamental mode signal propagates exclusively in retrograde motion, while higher modes propagate in prograde motion. It has previously been shown that differences in particle motion can be identified with multicomponent recordings and used to separate prograde from retrograde signals. Here we explore the domain of existence of prograde motion of the fundamental mode, arising from a combination of two conditions: (1) a shallow, high-impedance contrast and (2) a high Poisson ratio material. We present solutions to isolate fundamental and higher mode signals using multicomponent recordings. Previously, a time-domain polarity mute was used with limited success due to the overlap in the time domain of fundamental and higher mode signals at low frequencies. We present several new approaches to overcome this low-frequency obstacle, all of which utilize the different particle motions of retrograde and prograde signals. First, the Hilbert transform is used to phase shift one component by 90° prior to summation or subtraction of the other component. This enhances either retrograde or prograde motion and can increase the mode amplitude. Secondly, we present a new time–frequency domain polarity mute to separate retrograde and prograde signals. We demonstrate these methods with synthetic and field data to highlight the improvements to dispersion images and the resulting dispersion curve extraction.

scholarly journals Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Lingzhan Xue ◽  
Yu Gao ◽  
Meiying Wu ◽  
Tian Tian ◽  
Haiping Fan ◽  
...  
Keyword(s):  
Y Chromosome ◽  
Sex Chromosomes ◽  
Chromosome Pair ◽  
Sex Chromosome ◽  
Structural Variations ◽  
Recombination Suppression ◽  
Chromosome Differentiation ◽  
Y Chromosomes ◽  
Recent Origin ◽  
Mastacembelus Armatus

Abstract Background The origin of sex chromosomes requires the establishment of recombination suppression between the proto-sex chromosomes. In many fish species, the sex chromosome pair is homomorphic with a recent origin, providing species for studying how and why recombination suppression evolved in the initial stages of sex chromosome differentiation, but this requires accurate sequence assembly of the X and Y (or Z and W) chromosomes, which may be difficult if they are recently diverged. Results Here we produce a haplotype-resolved genome assembly of zig-zag eel (Mastacembelus armatus), an aquaculture fish, at the chromosomal scale. The diploid assembly is nearly gap-free, and in most chromosomes, we resolve the centromeric and subtelomeric heterochromatic sequences. In particular, the Y chromosome, including its highly repetitive short arm, has zero gaps. Using resequencing data, we identify a ~7 Mb fully sex-linked region (SLR), spanning the sex chromosome centromere and almost entirely embedded in the pericentromeric heterochromatin. The SLRs on the X and Y chromosomes are almost identical in sequence and gene content, but both are repetitive and heterochromatic, consistent with zero or low recombination. We further identify an HMG-domain containing gene HMGN6 in the SLR as a candidate sex-determining gene that is expressed at the onset of testis development. Conclusions Our study supports the idea that preexisting regions of low recombination, such as pericentromeric regions, can give rise to SLR in the absence of structural variations between the proto-sex chromosomes.

Optimally Sensitive and Efficient Compact Loudspeakers for Low Audio Frequencies

2007 ◽  
Vol 38 (7) ◽  
pp. 11-17
Author(s):  
Ronald M. Aarts
Keyword(s):  
Optimality Criterion ◽  
Low Frequency ◽  
Audio Signal ◽  
Design Procedure ◽  
Frequency Range ◽  
Force Factor ◽  
Low Frequencies ◽  
Limited Frequency ◽  
The Cost ◽  
Higher Sensitivity

Conventionally, the ultimate goal in loudspeaker design has been to obtain a flat frequency response over a specified frequency range. This can be achieved by carefully selecting the main loudspeaker parameters such as the enclosure volume, the cone diameter, the moving mass and the very crucial “force factor”. For loudspeakers in small cabinets the results of this design procedure appear to be quite inefficient, especially at low frequencies. This paper describes a new solution to this problem. It consists of the combination of a highly non-linear preprocessing of the audio signal and the use of a so called low-force-factor loudspeaker. This combination yields a strongly increased efficiency, at least over a limited frequency range, at the cost of a somewhat altered sound quality. An analytically tractable optimality criterion has been defined and has been verified by the design of an experimental loudspeaker. This has a much higher efficiency and a higher sensitivity than current low-frequency loudspeakers, while its cabinet can be much smaller.

An Analytical Model for the Interaction of Mass Inclusions in Heterogeneous (HG) Blankets

2011 ◽  
Vol 133 (6) ◽  
Author(s):  
A. Wagner ◽  
M. E. Johnson ◽  
K. Idrisi ◽  
D. P. Bartylla
Keyword(s):  
Elastic Layer ◽  
Analytical Approach ◽  
Low Frequency ◽  
Control Device ◽  
Effective Stiffness ◽  
Special Focus ◽  
Dynamic Vibration Absorber ◽  
Low Frequencies ◽  
Dynamic Vibration ◽  
The Masses

The heterogeneous (HG) blanket is a passive treatment used to reduce the low frequency transmission of sound through partitions. HG blankets, glued onto a structure, consist of an elastic medium with embedded mass inhomogeneities that mechanically replicate a mass-spring-damper system to reduce efficient radiating structural modes at low frequencies. The elastic layer typically used has sound absorption properties to create a noise control device with a wide bandwidth of performance. The natural frequency of an embedded dynamic vibration absorber is determined by the mass of the inhomogeneity as well as by its effective stiffness due to the interaction of the mass inclusion with the elastic layer. A novel analytical approach has been developed to describe in detail the interaction of the mass inclusions with the elastic layer and the interaction between the masses by evaluating special elastomechanical concepts. The effective stiffness is predicted by the analytical approach based on the shape of the mass inclusions as well as on the thickness and material properties of the layer. The experimental validation is included and a simplified direct equation to calculate the effective stiffness of a HG blanket is proposed. Furthermore, the stress field inside the elastic material will be evaluated with focus on the stresses at the base to assess the modeling of one or more masses placed on top of the elastic layer as dynamic vibration absorbers. Finally, the interaction between two (or more) masses placed onto the same layer is studied with special focus on the coupling of the masses at low distances between them.

Measurement of Dynamic Strain

1943 ◽  
Vol 10 (2) ◽  
pp. A85-A92
Author(s):  
C. O. Dohrenwend ◽  
W. R. Mehaffey
Keyword(s):  
High Speed ◽  
Shock Loading ◽  
Low Frequency ◽  
Dynamic Strain ◽  
Time Axis ◽  
Low Frequencies ◽  
Strain Measurements ◽  
Moving Vehicles ◽  
Machine Parts ◽  
Dynamic Strains

Abstract The measurement of dynamic strains of both high and low frequency give rise to a variety of problems in instrumentation. Two types of equipment and circuits designed and used by the authors are discussed in detail. The first type based on the amplitude-modulated method is for low frequencies from zero to about 15 per cent of the carrier frequency of 1025 cycles per sec. The equipment has application to strain measurements varying from static values to those produced in moving vehicles, various machine parts, structures such as crane bridges, in fact all strain measurements where the frequency is 150 cycles per sec or less. The second type of equipment discussed is a potentiometer type and is for high-frequency strain measurements from 100 cycles per sec to 8000 cycles per sec. This high-speed equipment is conveniently used for impact strain, such as produced in hammer blows, shock loading, forging equipment, and impact-factor determination. Both units are designed to be used with a cathode-ray oscillograph which lends itself to a variety of recording methods. The methods discussed include both the type where the time axis is obtained by sweeping the oscilloscope beam on a stationary film and where the time axis is obtained mechanically.

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