Quantitative analysis of the formation of nucleoli in Locusta migratoria

1986 ◽  
Vol 28 (2) ◽  
pp. 207-218 ◽  
Author(s):  
M. Diez ◽  
M. J. Puertas
Keyword(s):  
Mathematical Model ◽  
Quantitative Analysis ◽  
Locusta Migratoria ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Lower Probability ◽  
Wild Type ◽  
Differential Activation ◽  
Model Fits

At meiosis of Locusta migratoria, zero, one, or two nucleoli per long (L), medium (M), or short (S) nucleolar organizer region (NOR) bivalent can be clearly seen using an Ag-NOR technique. Diplotene cells with zero to six nucleoli were observed, whose distribution fitted a normal one. However, the distribution of nucleoli in the particular bivalents was not at random. A mathematical model was developed in an attempt to explain this differential activation of nucleoli. The model is based on the assumption that the activation of nucleoli is sequential following successive rounds, in such a way that the probability of a particular L, M, or S nucleolus being activated depends on the type of nucleoli previously activated. The nucleoli activated per cell tend to be distributed among bivalents, and the activation of a second nucleolus in a bivalent has a lower probability than the first one of any bivalent, generating interference. The model was developed for wild-type individuals and it was also applied to mutants that showed a distribution of nucleoli different from wild types, i.e., individuals carrying a translocation between two NOR chromosomes and asynaptic mutants. In both cases the model fits with the observed results. This suggests its general validity.Key words: nucleolus, Locusta, translocation, asynapsis.

Quantitative analysis of the variability of nucleolar organizer regions in Salmo trutta

Genome ◽  
1993 ◽  
Vol 36 (6) ◽  
pp. 1119-1123 ◽  
Author(s):  
P. Martínez ◽  
A. Viñas ◽  
C. Bouza ◽  
J. Castro ◽  
L. Sánchez
Keyword(s):  
Quantitative Analysis ◽  
Salmo Trutta ◽  
Chromosome Region ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Size Variation ◽  
Nucleolar Organizer ◽  
Chromosome Length ◽  
Nucleolar Organizer Regions ◽  
Structural Polymorphism

A quantitative analysis combined with Ag staining was carried out to study the size variation of the main nucleolar organizer region (NOR) bearing chromosome pair 11 of Salmo trutta. A standardized NOR size measurement was developed by comparing the length of the short arm (NOR-bearing region) to the total chromosome length. Statistical procedures support arguments for the existence of a large and structural polymorphism within this species for this chromosome region. A minimum of five different chromosome classes were identified, which account for the total variation found. Size variation among classes was due both to changes in the number of NOR clusters as well as to the amount of rDNA genes within each cluster. NOR size values were normally distributed in the sample analyzed.Key words: nucleolar organizer region, size polymorphism, brown trout.

scholarly journals The number and location of genes for 5S ribonucleic acid within the genome of Drosophila melanogaster

1971 ◽  
Vol 123 (2) ◽  
pp. 227-233 ◽  
Author(s):  
R. V. Quincey
Keyword(s):  
Drosophila Melanogaster ◽  
Ribonucleic Acid ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Haploid Genome ◽  
28S Rrna ◽  
Wild Type ◽  
5S Rna ◽  
Type D

DNA was prepared from wild-type and two mutant stocks of Drosophila melanogaster that differed in their dosage of the nucleolar organizer region. The relative amounts of DNA from the nucleolar organizer region in these preparations of DNA were determined by hybridization with 3H-labelled 28S rRNA. As expected, the amount of 3H-labelled 28S rRNA that hybridized was directly related to the dosage of nucleolar organizer region. No positive correlation was observed between the amount of 3H-labelled 5S RNA that hybridized and the dosage of nucleolar organizer region. Thus genes for 5S RNA are located primarily, if not exclusively, outside the nucleolar organizer region. The haploid genome of the wild-type D. melanogaster used in this work has 106 genes for 28S rRNA and 96–105 genes for 5S RNA.

scholarly journals Comparative FISH analysis of Senna tora tandem repeats revealed insights into the chromosome dynamics in Senna

2021 ◽  
Vol 43 (3) ◽  
pp. 237-249 ◽  
Author(s):  
Thanh Dat Ta ◽  
Nomar Espinosa Waminal ◽  
Thi Hong Nguyen ◽  
Remnyl Joyce Pellerin ◽  
Hyun Hee Kim
Keyword(s):  
Tandem Repeats ◽  
Chromosomal Rearrangements ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Pericentromeric Region ◽  
Its2 Sequence ◽  
Fish Analysis ◽  
Chromosomal Distribution ◽  
Chromosome Dynamics

Abstract Background DNA tandem repeats (TRs) are often abundant and occupy discrete regions in eukaryotic genomes. These TRs often cause or generate chromosomal rearrangements, which, in turn, drive chromosome evolution and speciation. Tracing the chromosomal distribution of TRs could therefore provide insights into the chromosome dynamics and speciation among closely related taxa. The basic chromosome number in the genus Senna is 2n = 28, but dysploid species like Senna tora have also been observed. Objective To understand the dynamics of these TRs and their impact on S. tora dysploidization. Methods We performed a comparative fluorescence in situ hybridization (FISH) analysis among nine closely related Senna species and compared the chromosomal distribution of these repeats from a cytotaxonomic perspective by using the ITS1-5.8S-ITS2 sequence to infer phylogenetic relationships. Results Of the nine S. tora TRs, two did not show any FISH signal whereas seven TRs showed similar and contrasting patterns to other Senna species. StoTR01_86, which was localized in the pericentromeric regions in all S. tora, but not at the nucleolar organizer region (NOR) site, was colocalized at the NOR site in all species except in S. siamea. StoTR02_7_tel was mostly localized at chromosome termini, but some species had an interstitial telomeric repeat in a few chromosomes. StoTR05_180 was distributed in the subtelomeric region in most species and was highly amplified in the pericentromeric region in some species. StoTR06_159 was either absent or colocalized in the NOR site in some species, and StoIGS_463, which was localized at the NOR site in S. tora, was either absent or localized at the subtelomeric or pericentromeric regions in other species. Conclusions These data suggest that TRs play important roles in S. tora dysploidy and suggest the involvement of 45S rDNA intergenic spacers in “carrying” repeats during genome reshuffling.

scholarly journals The genomic structure of a human chromosome 22 nucleolar organizer region determined by TAR cloning

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Jung-Hyun Kim ◽  
Vladimir N. Noskov ◽  
Aleksey Y. Ogurtsov ◽  
Ramaiah Nagaraja ◽  
Nikolai Petrov ◽  
...  
Keyword(s):  
Genomic Structure ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Chromosome 21 ◽  
Reference Sequence ◽  
Chromosome 22 ◽  
Rdna Variation ◽  
High Level ◽  
Tar Cloning

AbstractThe rDNA clusters and flanking sequences on human chromosomes 13, 14, 15, 21 and 22 represent large gaps in the current genomic assembly. The organization and the degree of divergence of the human rDNA units within an individual nucleolar organizer region (NOR) are only partially known. To address this lacuna, we previously applied transformation-associated recombination (TAR) cloning to isolate individual rDNA units from chromosome 21. That approach revealed an unexpectedly high level of heterogeneity in human rDNA, raising the possibility of corresponding variations in ribosome dynamics. We have now applied the same strategy to analyze an entire rDNA array end-to-end from a copy of chromosome 22. Sequencing of TAR isolates provided the entire NOR sequence, including proximal and distal junctions that may be involved in nucleolar function. Comparison of the newly sequenced rDNAs to reference sequence for chromosomes 22 and 21 revealed variants that are shared in human rDNA in individuals from different ethnic groups, many of them at high frequency. Analysis infers comparable intra- and inter-individual divergence of rDNA units on the same and different chromosomes, supporting the concerted evolution of rDNA units. The results provide a route to investigate further the role of rDNA variation in nucleolar formation and in the empirical associations of nucleoli with pathology.

Nucleolar organizer region staining patterns in paraffin-embedded tissue cells from human skin cancers

2005 ◽  
Vol 32 (5) ◽  
pp. 323-328 ◽  
Author(s):  
Rosana F. Romao-Correa ◽  
Durvanei A. Maria ◽  
Mithitaka Soma ◽  
Mirian N. Sotto ◽  
Jose Antonio Sanches ◽  
...  
Keyword(s):  
Human Skin ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Skin Cancers ◽  
Tissue Cells

Nucleologenesis in Trypanosoma cruzi

2016 ◽  
Vol 22 (3) ◽  
pp. 621-629 ◽  
Author(s):  
Tomás Nepomuceno-Mejía ◽  
Reyna Lara-Martínez ◽  
Roberto Hernández ◽  
María de Lourdes Segura-Valdez ◽  
Luis F. Jiménez-García
Keyword(s):  
Cell Division ◽  
Trypanosoma Cruzi ◽  
Ethylenediaminetetraacetic Acid ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Light And Electron Microscopy ◽  
Nucleolar Organizer ◽  
Nuclear Bodies ◽  
Nucleolar Organizer Regions ◽  
Nucleolar Material

AbstractNucleolar assembly is a cellular event that requires the synthesis and processing of ribosomal RNA, in addition to the participation of pre-nucleolar bodies (PNBs) at the end of mitosis. In mammals and plants, nucleolar biogenesis has been described in detail, but in unicellular eukaryotes it is a poorly understood process. In this study, we used light and electron microscopy cytochemical techniques to investigate the distribution of nucleolar components in the pathway of nucleolus rebuilding during closed cell division in epimastigotes of Trypanosoma cruzi, the etiologic agent of American trypanosomiasis. Silver impregnation specific for nucleolar organizer regions and an ethylenediaminetetraacetic acid regressive procedure to preferentially stain ribonucleoprotein revealed the conservation and dispersion of nucleolar material throughout the nucleoplasm during cell division. Furthermore, at the end of mitosis, the argyrophilic proteins were concentrated in the nucleolar organizer region. Unexpectedly, accumulation of nucleolar material in the form of PNBs was not visualized. We suggest that formation of the nucleolus in epimastigotes of T. cruzi occurs by a process that does not require the concentration of nucleolar material within intermediate nuclear bodies such as mammalian and plant PNBs.

Karyotype evolution and chromosome numbers in Chrysopsis (Nutt.) Ell. sensu Semple (Compositae–Astereae)

1980 ◽  
Vol 58 (2) ◽  
pp. 164-171 ◽  
Author(s):  
J. C. Semple ◽  
C. C. Chinnappa
Keyword(s):  
Chromosome Numbers ◽  
Karyotype Evolution ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Acrocentric Chromosomes

The karyotypes of all species of Chrysopsis were analysed and four basic complements were recognised. The X = 5 karyotype was possessed by all seven n = 5 species and consisted of three submetacentric and two acrocentric chromosomes, one bearing the nucleolar organizer region medially on its short arm. Each X = 4 species had a distinct karyotype. The n = 4 karyotype of C. mariana had diverged less from the X = 5 karyotype than that of C. pilosa. The X2 = 9 karyotype shared by three n = 9 taxa was found to be little more than a combination of the X = 5 karyotype and the X = 4 mariana karyotype and was therefore of allopolyploid origin. Some shifting in the location of the nucleolar organizer region has occurred in each group.

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