Isolation and characterization of the mating-type locus of the barley pathogen Pyrenophora teres and frequencies of mating-type idiomorphs within and among fungal populations collected from barley landraces

Genome ◽  
2005 ◽  
Vol 48 (5) ◽  
pp. 855-869 ◽  
Author(s):  
Domenico Rau ◽  
Frank J Maier ◽  
Roberto Papa ◽  
Anthony H.D Brown ◽  
Virgilio Balmas ◽  
...  
Keyword(s):  
Sexual Reproduction ◽  
Mating Type ◽  
Clonal Selection ◽  
Leptosphaeria Maculans ◽  
Aflp Analysis ◽  
Pyrenophora Teres ◽  
Mating Types ◽  
Type Locus ◽  
Barley Landrace ◽  
Isolation And Characterization

Pyrenophora teres f. sp. teres mating-type genes (MAT-1: 1190 bp; MAT-2: 1055 bp) have been identified. Their predicted proteins, measuring 379 and 333 amino acids, respectively, are similar to those of other Pleosporales, such as Pleospora sp., Cochliobolus sp., Alternaria alternata, Leptosphaeria maculans, and Phaeosphaeria nodorum. The structure of the MAT locus is discussed in comparison with those of other fungi. A mating-type PCR assay has also been developed; with this assay we have analyzed 150 isolates that were collected from 6 Sardinian barley landrace populations. Of these, 68 were P. teres f. sp. teres (net form; NF) and 82 were P. teres f. sp. maculata (spot form; SF). Within each mating type, the NF and SF amplification products were of the same length and were highly similar in sequence. The 2 mating types were present in both the NF and the SF populations at the field level, indicating that they have all maintained the potential for sexual reproduction. Despite the 2 forms being sympatric in 5 fields, no intermediate isolates were detected with amplified fragment length polymorphism (AFLP) analysis. These results suggest that the 2 forms are genetically isolated under the field conditions. In all of the samples of P. teres, the ratio of the 2 mating types was consistently in accord with the 1:1 null hypothesis. This ratio is expected when segregation distortion and clonal selection among mating types are absent or asexual reproduction is rare. Overall, sexual reproduction appears to be the major process that equalizes the frequencies of the 2 mating types within populations.Key words: Pyrenophora teres, mating-types, AFLPs, sexual reproduction, selection, barley.

The alpha-mating type locus of Cryptococcus neoformans contains a peptide pheromone gene

1993 ◽  
Vol 13 (3) ◽  
pp. 1962-1970
Author(s):  
T D Moore ◽  
J C Edman
Keyword(s):  
Cryptococcus Neoformans ◽  
Mating Type ◽  
Cell Types ◽  
Yeast Cells ◽  
Mating Types ◽  
Type Locus ◽  
Reading Frame ◽  
Cloning Method ◽  
Opportunistic Fungal Pathogen ◽  
Specific Fragment

The opportunistic fungal pathogen Cryptococcus neoformans has two mating types, MATa and MAT alpha. The MAT alpha strains are more virulent. Mating of opposite mating type haploid yeast cells results in the production of a filamentous hyphal phase. The MAT alpha locus has been isolated in this study in order to identify the genetic differences between mating types and their contribution to virulence. A 138-bp fragment of MAT alpha-specific DNA which cosegregates with alpha-mating type was isolated by using a difference cloning method. Overlapping phage and cosmid clones spanning the entire MAT alpha locus were isolated by using this MAT alpha-specific fragment as a probe. Mapping of these clones physically defined the MAT alpha locus to a 35- to 45-kb region which is present only in MAT alpha strains. Transformation studies with fragments of the MAT alpha locus identified a 2.1-kb XbaI-HindIII fragment that directs starvation-induced filament formation in MATa cells but not in MAT alpha cells. This 2.1-kb fragment contains a gene, MF alpha, with a small open reading frame encoding a pheromone precursor similar to the lipoprotein mating factors found in Saccharomyces cerevisiae, Ustilago maydis, and Schizosaccharomyces pombe. The ability of the MATa cells to express, process, and secrete the MAT alpha pheromone in response to starvation suggests similar mechanisms for these processes in both cell types. These results also suggest that the production of pheromone is under a type of nutritional control shared by the two cell types.

Identification of biosynthetic intermediates for the mating hormone α2 of the plant pathogen Phytophthora

2021 ◽  
Author(s):  
Suguru Ariyoshi ◽  
Yusuke Imazu ◽  
Ryuji Ohguri ◽  
Ryo Katsuta ◽  
Arata Yajima ◽  
...  
Keyword(s):  
Cytochrome P450 ◽  
Sexual Reproduction ◽  
Mating Type ◽  
Plant Pathogen ◽  
Type Strain ◽  
Mating Types ◽  
Synthetic Intermediates ◽  
The Cross

Abstract The heterothallic group of the plant pathogen Phytophthora can sexually reproduce between the cross-compatible mating types A1 and A2. The mating hormone α2, produced by A2 mating type and utilized to promote the sexual reproduction of the partner A1 type, is known to be biosynthesized from phytol. In this study, we identified two biosynthetic intermediates, 11- and 16-hydroxyphytols (1 and 2), for α2 by administering the synthetic intermediates to an A2 type strain to produce α2 and by administering phytol to A2 strains to detect the intermediates in the mycelia. The results suggest that α2 is biosynthesized by possibly two cytochrome P450 oxygenases via two hydroxyphytol intermediates (1 and 2) in A2 hyphae and secreted outside.

INTERCONVERSION OF YEAST MATING TYPES II. RESTORATION OF MATING ABILITY TO STERILE MUTANTS IN HOMOTHALLIC AND HETEROTHALLIC STRAINS

Genetics ◽  
1977 ◽  
Vol 85 (3) ◽  
pp. 373A-393
Author(s):  
James B Hicks ◽  
Ira Herskowitz
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Mating Type ◽  
Yeast Cells ◽  
Mating Types ◽  
Yeast Saccharomyces Cerevisiae ◽  
Type Locus ◽  
Mating Ability ◽  
Mating Type Locus ◽  
Regulatory Information ◽  
Ho Gene

ABSTRACT The two mating types of the yeast Saccharomyces cerevisiae can be interconverted in both homothallic and heterothallic strains. Previous work indicates that all yeast cells contain the information to be both a and α and that the HO gene (in homothallic strains) promotes a change in mating type by causing a change at the mating type locus itself. In both heterothallic and homothallic strains, a defective α mating type locus can be converted to a functional a locus and subsequently to a functional α locus. In contrast, action of the HO gene does not restore mating ability to a strain defective in another gene for mating which is not at the mating type locus. These observations indicate that a yeast cell contains an additional copy (or copies) of α information, and lead to the "cassette" model for mating type interconversion. In this model, HM  a and hmα loci are blocs of unexpressed α regulatory information, and HMα and hm  a loci are blocs of unexpressed a regulatory information. These blocs are silent because they lack an essential site for expression, and become active upon insertion of this information (or a copy of the information) into the mating type locus by action of the HO gene.

Genetic mapping and non-Mendelian segregation of mating type loci in the oomycete, Phytophthora infestans.

Genetics ◽  
1995 ◽  
Vol 141 (2) ◽  
pp. 503-512 ◽  
Author(s):  
H S Judelson ◽  
L J Spielman ◽  
R C Shattock
Keyword(s):  
Phytophthora Infestans ◽  
Mating Type ◽  
Dna Markers ◽  
Bulked Segregant Analysis ◽  
Random Amplified Polymorphic Dna ◽  
Mating Types ◽  
Mendelian Segregation ◽  
Range Restriction ◽  
Type Locus ◽  
Mating Type Locus

Abstract DNA markers linked to the determinants of mating type in the oomycete, Phytophthora infestans, were identified and used to address the genetic basis of heterothallism in the normally diploid fungus. Thirteen loci linked to the A1 and A2 mating types were initially identified by bulked segregant analysis using random amplified polymorphic DNA markers (RAPDs) and subsequently scored in three crosses polymorphisms (SSCP), cleaved amplified polymorphisms (CAPS), or allele-specific polymerase chain reaction markers (AS-PCR). All DNA markers mapped to a single region, consistent with a single locus determining both mating types. Long-range restriction mapping also demonstrated the linkage of the markers to one region and delimited the mating type locus to a 100-kb region. The interval containing the mating type locus displayed non-Mendelian segregation as only two of the four expected genotypes were detected in progeny. This is consistent with a system of balance lethal loci near the mating type locus. A model for mating type determination is presented in which the balanced lethals exclude form progeny those with potentially conflicting combinations of mating type alleles, such as those simultaneously expressing A1 and A2 functions.

scholarly journals Genomic and Population Analyses of the Mating Type Loci in Coccidioides Species Reveal Evidence for Sexual Reproduction and Gene Acquisition

2007 ◽  
Vol 6 (7) ◽  
pp. 1189-1199 ◽  
Author(s):  
M. Alejandra Mandel ◽  
Bridget M. Barker ◽  
Scott Kroken ◽  
Steven D. Rounsley ◽  
Marc J. Orbach
Keyword(s):  
Sexual Reproduction ◽  
Mating Type ◽  
Mating Types ◽  
Coccidioides Immitis ◽  
Genome Sequences ◽  
Valley Fever ◽  
Population Analyses ◽  
Gene Acquisition ◽  
Close Proximity

ABSTRACT Coccidioides species, the fungi responsible for the valley fever disease, are known to reproduce asexually through the production of arthroconidia that are the infectious propagules. The possible role of sexual reproduction in the survival and dispersal of these pathogens is unexplored. To determine the potential for mating of Coccidioides, we analyzed genome sequences and identified mating type loci characteristic of heterothallic ascomycetes. Coccidioides strains contain either a MAT1-1 or a MAT1-2 idiomorph, which is 8.1 or 9 kb in length, respectively, the longest reported for any ascomycete species. These idiomorphs contain four or five genes, respectively, more than are present in the MAT loci of most ascomycetes. Along with their cDNA structures, we determined that all genes in the MAT loci are transcribed. Two genes frequently found in common sequences flanking MAT idiomorphs, APN2 and COX13, are within the MAT loci in Coccidioides, but the MAT1-1 and MAT1-2 copies have diverged dramatically from each other. Data indicate that the acquisition of these genes in the MAT loci occurred prior to the separation of Coccidioides from Uncinocarpus reesii. An analysis of 436 Coccidioides isolates from patients and the environment indicates that in both Coccidioides immitis and C. posadasii, there is a 1:1 distribution of MAT loci, as would be expected for sexually reproducing species. In addition, an analysis of isolates obtained from 11 soil samples demonstrated that at three sampling sites, strains of both mating types were present, indicating that compatible strains were in close proximity in the environment.

scholarly journals Mating Type Locus-Specific Polymerase Chain Reaction Markers for Differentiation of Pyrenophora teres f. teres and P. teres f. maculata, the Causal Agents of Barley Net Blotch

2010 ◽  
Vol 100 (12) ◽  
pp. 1298-1306 ◽  
Author(s):  
Shunwen Lu ◽  
Gregory J. Platz ◽  
Michael C. Edwards ◽  
Timothy L. Friesen
Keyword(s):  
Polymerase Chain Reaction ◽  
Mating Type ◽  
Pathogen Detection ◽  
Epidemiological Studies ◽  
Pyrenophora Teres ◽  
Nucleotide Polymorphisms ◽  
Net Blotch ◽  
Chain Reaction ◽  
Type Locus ◽  
Polymerase Chain

Fourteen single nucleotide polymorphisms (SNPs) were identified at the mating type (MAT) loci of Pyrenophora teres f. teres (Ptt), which causes net form (NF) net blotch, and P. teres f. maculata (Ptm), which causes spot form (SF) net blotch of barley. MAT-specific SNP primers were developed for polymerase chain reaction (PCR) and the two forms were differentiated by distinct PCR products: PttMAT1-1 (1,143 bp) and PttMAT1-2 (1,421 bp) for NF MAT1-1 and MAT1-2 isolates; PtmMAT1-1 (194 bp) and PtmMAT1-2 (939 bp) for SF MAT1-1 and MAT1-2 isolates, respectively. Specificity was validated using 37 NF and 17 SF isolates collected from different geographic regions. Both MAT1-1 and MAT1-2 SNP primers retained respective specificity when used in duplex PCR. No cross-reactions were observed with DNA from P. graminea, P. tritici-repentis, or other ascomycetes, or barley. Single or mixed infections of the two different forms were also differentiated. This study provides the first evidence that the limited SNPs at the MAT locus are sufficient for distinguishing closely related heterothallic ascomycetes at subspecies levels, thus allowing pathogenicity and mating type characteristics of the fungus to be determined simultaneously. Methods presented will facilitate pathogen detection, disease management, and epidemiological studies.

scholarly journals Invasion and extinction dynamics of mating types under facultative sexual reproduction

2019 ◽  
Author(s):  
Peter Czuppon ◽  
George W. A. Constable
Keyword(s):  
Sexual Reproduction ◽  
Mating Type ◽  
Average Rate ◽  
Natural Populations ◽  
Null Model ◽  
Mating Types ◽  
Stationary Probability Distribution ◽  
Time To Extinction ◽  
Establishment Probability ◽  
Mean Time

AbstractIn sexually reproducing isogamous species, syngamy between gametes is generally not indiscriminate, but rather restricted to occurring between complementary self-incompatible mating types. A longstanding question regards the evolutionary pressures that control the number of mating types observed in natural populations, which ranges from two to many thousands. Here, we describe a population genetic null model of this reproductive system and derive expressions for the stationary probability distribution of the number of mating types, the establishment probability of a newly arising mating type and the mean time to extinction of a resident type. Our results yield that the average rate of sexual reproduction in a population correlates positively with the expected number of mating types observed. We further show that the low number of mating types predicted in the rare-sex regime is primarily driven by low invasion probabilities of new mating type alleles, with established resident alleles being very stable over long evolutionary periods. Moreover, our model naturally exhibits varying selection strength dependent on the number of present mating types. This results in higher extinction and lower invasion rates for an increasing number of residents.

scholarly journals A SUPPRESSOR OF MATING-TYPE LOCUS MUTATIONS IN SACCHAROMYCES CEREVISIAE: EVIDENCE FOR AND IDENTIFICATION OF CRYPTIC MATING-TYPE LOCI

Genetics ◽  
1979 ◽  
Vol 93 (4) ◽  
pp. 877-901 ◽  
Author(s):  
Jasper Rine ◽  
Jeffrey N Strathern ◽  
James B Hicks ◽  
Ira Herskowitz
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Mating Type ◽  
Mating Types ◽  
Type Locus ◽  
Mating Ability ◽  
Mating Type Locus ◽  
A Cells

ABSTRACT A mutation has been identified that suppresses the mating and sporulation defects of all mutations in the mating-type loci of S. cereuisiae. This suppressor, sir1-1, restores mating ability to matαl and matα2 mutants and restores sporulation ability to matα2 and mata1 mutants. MATa sir1-1 strains exhibit a polar budding pattern and have reduced sensitivity to α-factor, both properties of a/α diploids. Furthermore, sir1-1 allows MATa/MATa, matα1/matα1, and MATα/MATα strains to sporulate efficiently. All actions of sir1-1 are recessive to SIR1. The ability of sir1-1 to supply all functions necessary for mating and sporulation and its effects in a cells are explained by proposing that sir1-1 allows expression of mating type loci which are ordinarily not expressed. The ability of sir1-1 to suppress the matαl-5 mutation is dependent on the HMa gene, previously identified as required for switching of mating types from a to α. Thus, as predicted by the cassette model, HMa is functionally equivalent to MATα since it supplies functions of MATα. We propose that sir1-1 is defective in a function, Sir ("Silent-information regulator"), whose role may be to regulate expression of HMa and HMα.

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